RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 ZNF592Q92610 1267 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 KIF1BPQ96EK5 621 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 CLCN1P35523 988 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 PROSER3Q2NL68 480 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 LARP1BQ659C4 914 aaKnown RBP14.9□□□□□ -0.02
USHBP1-207ENST00000597928 TSC1Q92574 1164 aa14.9□□□□□ -0.02
USHBP1-207ENST00000597928 SOS1Q07889 1333 aaPredicted RBP14.89□□□□□ -0.03
USHBP1-207ENST00000597928 AK2P54819 239 aa14.89□□□□□ -0.03
USHBP1-207ENST00000597928 IL25Q9H293 177 aa14.89□□□□□ -0.03
USHBP1-207ENST00000597928 ADGRB1O14514 1584 aa14.89□□□□□ -0.03
USHBP1-207ENST00000597928 RUFY2Q8WXA3 655 aa14.89□□□□□ -0.03
USHBP1-207ENST00000597928 SYTL4Q96C24 671 aaPredicted RBP14.89□□□□□ -0.03
USHBP1-207ENST00000597928 TTC12Q9H892 705 aaPredicted RBP14.89□□□□□ -0.03
USHBP1-207ENST00000597928 PROSER2Q86WR7 435 aaPredicted RBP14.89□□□□□ -0.03
USHBP1-207ENST00000597928 FAM184AQ8NB25 1140 aa14.89□□□□□ -0.03
USHBP1-207ENST00000597928 RAB11FIP3O75154 756 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 DNM1Q05193 864 aaKnown RBP14.88□□□□□ -0.03
USHBP1-207ENST00000597928 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 CLASP1Q7Z460 1538 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 CAMSAP1Q5T5Y3 1602 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 GJB2P29033 226 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
USHBP1-207ENST00000597928 ZRSR1Q15695 479 aaKnown RBP14.87□□□□□ -0.03
USHBP1-207ENST00000597928 CHMP4CQ96CF2 233 aa14.87□□□□□ -0.03
USHBP1-207ENST00000597928 NLRP1Q9C000 1473 aa14.87□□□□□ -0.03
USHBP1-207ENST00000597928 AK9Q5TCS8 1911 aa14.87□□□□□ -0.03
USHBP1-207ENST00000597928 CHST3Q7LGC8 479 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 FMNL2Q96PY5 1086 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 SNRKQ9NRH2 765 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 STRN4Q9NRL3 753 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 WDR33Q9C0J8 1336 aaKnown RBP14.86□□□□□ -0.03
USHBP1-207ENST00000597928 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 INO80Q9ULG1 1556 aaPredicted RBP14.86□□□□□ -0.03
USHBP1-207ENST00000597928 PIK3R4Q99570 1358 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 MBD3O95983 291 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 UBE3BQ7Z3V4 1068 aa14.86□□□□□ -0.03
USHBP1-207ENST00000597928 UQCRHLA0A096LP55 91 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
USHBP1-207ENST00000597928 UQCRHP07919 91 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 DDX46Q7L014 1031 aaKnown RBP14.85□□□□□ -0.03
USHBP1-207ENST00000597928 TOMM22Q9NS69 142 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 PTPRMP28827 1452 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 HSP90AB3PQ58FF7 597 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 CCDC129Q6ZRS4 1044 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 UBE2Q2Q8WVN8 375 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
USHBP1-207ENST00000597928 FLT4P35916 1363 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 PNPLA6Q8IY17 1366 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 PTH1RQ03431 593 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 NFATC2IPQ8NCF5 419 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 ZDHHC9Q9Y397 364 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
USHBP1-207ENST00000597928 NPHP1O15259 732 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 PHF14O94880 888 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 CCT2P78371 535 aaKnown RBP14.84□□□□□ -0.03
USHBP1-207ENST00000597928 ANKRD24Q8TF21 1146 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 PRDM10Q9NQV6 1147 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 STX6O43752 255 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 WASHC4Q2M389 1173 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 COPS6Q7L5N1 327 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
USHBP1-207ENST00000597928 ADCK5Q3MIX3 580 aa14.84□□□□□ -0.03
USHBP1-207ENST00000597928 CPS1P31327 1500 aa14.83□□□□□ -0.03
USHBP1-207ENST00000597928 ZBTB3Q9H5J0 574 aa14.83□□□□□ -0.03
USHBP1-207ENST00000597928 LIMCH1Q9UPQ0 1083 aa14.83□□□□□ -0.03
USHBP1-207ENST00000597928 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.04
USHBP1-207ENST00000597928 CHGBP05060 677 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 APPP05067 770 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 MCM2P49736 904 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 HSP90AB4PQ58FF6 505 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 SYT1P21579 422 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 XAGE3Q8WTP9 111 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 ECHDC1Q9NTX5 307 aa14.83□□□□□ -0.04
USHBP1-207ENST00000597928 SLFNL1Q499Z3 407 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 LRSAM1Q6UWE0 723 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 BICC1Q9H694 974 aaKnown RBP14.82□□□□□ -0.04
USHBP1-207ENST00000597928 DBF4Q9UBU7 674 aaPredicted RBP14.82□□□□□ -0.04
USHBP1-207ENST00000597928 SNX14Q9Y5W7 946 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 MROH1Q8NDA8 1641 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 CD163L1Q9NR16 1453 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.82□□□□□ -0.04
USHBP1-207ENST00000597928 TLR7Q9NYK1 1049 aaKnown RBP14.82□□□□□ -0.04
USHBP1-207ENST00000597928 RBM8AQ9Y5S9 174 aaKnown RBP14.82□□□□□ -0.04
USHBP1-207ENST00000597928 ALKQ9UM73 1620 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 LARGE1O95461 756 aa14.82□□□□□ -0.04
USHBP1-207ENST00000597928 NMIQ13287 307 aaPredicted RBP14.82□□□□□ -0.04
USHBP1-207ENST00000597928 NEXMIFQ5QGS0 1516 aa14.81□□□□□ -0.04
USHBP1-207ENST00000597928 HAND2P61296 217 aa14.81□□□□□ -0.04
USHBP1-207ENST00000597928 SF3A1Q15459 793 aaKnown RBP14.81□□□□□ -0.04
USHBP1-207ENST00000597928 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
USHBP1-207ENST00000597928 ADCY5O95622 1261 aa14.81□□□□□ -0.04
USHBP1-207ENST00000597928 GNL2Q13823 731 aaKnown RBP14.81□□□□□ -0.04
USHBP1-207ENST00000597928 ATP6V1DQ9Y5K8 247 aa14.81□□□□□ -0.04
USHBP1-207ENST00000597928 TRIM5Q9C035 493 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 CCDC39Q9UFE4 941 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 ANKLE2Q86XL3 938 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 ERCC4Q92889 916 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms