RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 SBF1O95248 1867 aa14.35□□□□□ -0.11
PNKP-208ENST00000596624 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
PNKP-208ENST00000596624 ZPR1O75312 459 aa14.34□□□□□ -0.11
PNKP-208ENST00000596624 TOMM70O94826 608 aa14.34□□□□□ -0.11
PNKP-208ENST00000596624 DALRD3Q5D0E6 543 aaKnown RBP14.34□□□□□ -0.11
PNKP-208ENST00000596624 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
PNKP-208ENST00000596624 ZBTB1Q9Y2K1 713 aa14.34□□□□□ -0.11
PNKP-208ENST00000596624 SIPA1L3O60292 1781 aaPredicted RBP14.34□□□□□ -0.11
PNKP-208ENST00000596624 COL15A1P39059 1388 aa14.34□□□□□ -0.11
PNKP-208ENST00000596624 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
PNKP-208ENST00000596624 EIF5P55010 431 aaKnown RBP14.33□□□□□ -0.12
PNKP-208ENST00000596624 NFIXQ14938 502 aa14.33□□□□□ -0.12
PNKP-208ENST00000596624 IL17REQ8NFR9 667 aa14.33□□□□□ -0.12
PNKP-208ENST00000596624 DLEC1Q9Y238 1755 aa14.32□□□□□ -0.12
PNKP-208ENST00000596624 CC2D1BQ5T0F9 858 aaKnown RBP14.32□□□□□ -0.12
PNKP-208ENST00000596624 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
PNKP-208ENST00000596624 CHRNA5P30532 468 aa14.31□□□□□ -0.12
PNKP-208ENST00000596624 GAS2L2Q8NHY3 880 aa14.31□□□□□ -0.12
PNKP-208ENST00000596624 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
PNKP-208ENST00000596624 ZNF790Q6PG37 636 aa14.3□□□□□ -0.12
PNKP-208ENST00000596624 DNAJC5GQ8N7S2 189 aa14.3□□□□□ -0.12
PNKP-208ENST00000596624 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
PNKP-208ENST00000596624 NMRK2Q9NPI5 230 aa14.3□□□□□ -0.12
PNKP-208ENST00000596624 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
PNKP-208ENST00000596624 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
PNKP-208ENST00000596624 STARD3NLO95772 234 aa14.29□□□□□ -0.12
PNKP-208ENST00000596624 SERPINB2P05120 415 aa14.29□□□□□ -0.12
PNKP-208ENST00000596624 APLP1P51693 650 aa14.29□□□□□ -0.12
PNKP-208ENST00000596624 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
PNKP-208ENST00000596624 ZNF496Q96IT1 587 aaPredicted RBP14.29□□□□□ -0.12
PNKP-208ENST00000596624 A0A087WZG4 1122 aa14.28□□□□□ -0.12
PNKP-208ENST00000596624 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
PNKP-208ENST00000596624 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.13
PNKP-208ENST00000596624 TTC5Q8N0Z6 440 aa14.27□□□□□ -0.13
PNKP-208ENST00000596624 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
PNKP-208ENST00000596624 PDZRN3Q9UPQ7 1066 aa14.27□□□□□ -0.13
PNKP-208ENST00000596624 SCN7AQ01118 1682 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 KDM2BQ8NHM5 1336 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 TEFQ10587 303 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 FSTL1Q12841 308 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 RNF181Q9P0P0 153 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 ANKRD31Q8N7Z5 1873 aa14.26□□□□□ -0.13
PNKP-208ENST00000596624 CARMIL3Q8ND23 1372 aa14.25□□□□□ -0.13
PNKP-208ENST00000596624 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
PNKP-208ENST00000596624 PRELPP51888 382 aa14.25□□□□□ -0.13
PNKP-208ENST00000596624 TTLL6Q8N841 843 aa14.25□□□□□ -0.13
PNKP-208ENST00000596624 TNRC6CQ9HCJ0 1690 aaKnown RBP14.25□□□□□ -0.13
PNKP-208ENST00000596624 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
PNKP-208ENST00000596624 RGL2O15211 777 aa14.24□□□□□ -0.13
PNKP-208ENST00000596624 TBC1D9BQ66K14 1250 aa14.24□□□□□ -0.13
PNKP-208ENST00000596624 FMNL2Q96PY5 1086 aa14.24□□□□□ -0.13
PNKP-208ENST00000596624 BRIP1Q9BX63 1249 aa14.24□□□□□ -0.13
PNKP-208ENST00000596624 LMNB1P20700 586 aa14.23□□□□□ -0.13
PNKP-208ENST00000596624 PRKAR2BP31323 418 aa14.23□□□□□ -0.13
PNKP-208ENST00000596624 H0YIN7 160 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 NFKBIEO00221 500 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 HTATSF1O43719 755 aaKnown RBP14.22□□□□□ -0.13
PNKP-208ENST00000596624 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 C2CD5Q86YS7 1000 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 FER1L6Q2WGJ9 1857 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 BCORQ6W2J9 1755 aa14.22□□□□□ -0.13
PNKP-208ENST00000596624 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 CCDC88AQ3V6T2 1871 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 GLTPD2A6NH11 291 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 KCNQ3O43525 872 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 A1BGP04217 495 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 PDE6BP35913 854 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 RASSF7Q02833 373 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 RRAGCQ9HB90 399 aa14.21□□□□□ -0.13
PNKP-208ENST00000596624 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
PNKP-208ENST00000596624 LTBP3Q9NS15 1303 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 BTBD11A6QL63 1104 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 JMYQ8N9B5 988 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 NUDCQ9Y266 331 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
PNKP-208ENST00000596624 COL11A2P13942 1736 aaPredicted RBP14.2□□□□□ -0.14
PNKP-208ENST00000596624 KLRG2A4D1S0 409 aaPredicted RBP14.19□□□□□ -0.14
PNKP-208ENST00000596624 POTECB2RU33 542 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 SRGNP10124 158 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 VEGFAP15692 232 aaPredicted RBP14.18□□□□□ -0.14
PNKP-208ENST00000596624 STYK1Q6J9G0 422 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 BICDL1Q6ZP65 573 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
PNKP-208ENST00000596624 KLRG1Q96E93 195 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 SETDB2Q96T68 719 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 ARFGEF2Q9Y6D5 1785 aa14.18□□□□□ -0.14
PNKP-208ENST00000596624 SNRPA1P09661 255 aaKnown RBP14.17□□□□□ -0.14
PNKP-208ENST00000596624 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
PNKP-208ENST00000596624 SMC1BQ8NDV3 1235 aa14.17□□□□□ -0.14
PNKP-208ENST00000596624 C7orf43Q8WVR3 580 aa14.17□□□□□ -0.14
PNKP-208ENST00000596624 TIAM2Q8IVF5 1701 aa14.17□□□□□ -0.14
PNKP-208ENST00000596624 SLX4Q8IY92 1834 aa14.17□□□□□ -0.14
PNKP-208ENST00000596624 NBPF26B4DH59 902 aa14.16□□□□□ -0.14
PNKP-208ENST00000596624 NBPF10Q6P3W6 841 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms