RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 ZBTB1Q9Y2K1 713 aa33.79■■■■□ 3
ZNF558-203ENST00000595786 BTBD11A6QL63 1104 aa33.78■■■■□ 3
ZNF558-203ENST00000595786 NARFQ9UHQ1 456 aa33.78■■■■□ 3
ZNF558-203ENST00000595786 C10orf71Q711Q0 1435 aa33.78■■■■□ 3
ZNF558-203ENST00000595786 PNNQ9H307 717 aaKnown RBP33.76■■■□□ 2.99
ZNF558-203ENST00000595786 COL15A1P39059 1388 aa33.75■■■□□ 2.99
ZNF558-203ENST00000595786 TM4SF1P30408 202 aa33.75■■■□□ 2.99
ZNF558-203ENST00000595786 USPL1Q5W0Q7 1092 aa33.75■■■□□ 2.99
ZNF558-203ENST00000595786 A0A087WZG4 1122 aa33.73■■■□□ 2.99
ZNF558-203ENST00000595786 EIF5P55010 431 aaKnown RBP33.73■■■□□ 2.99
ZNF558-203ENST00000595786 PXDNLA1KZ92 1463 aa33.73■■■□□ 2.99
ZNF558-203ENST00000595786 CANXP27824 592 aaKnown RBP33.72■■■□□ 2.99
ZNF558-203ENST00000595786 DDX10Q13206 875 aaKnown RBP33.72■■■□□ 2.99
ZNF558-203ENST00000595786 MCM10Q7L590 875 aa33.72■■■□□ 2.99
ZNF558-203ENST00000595786 DDR1Q08345 913 aa33.71■■■□□ 2.99
ZNF558-203ENST00000595786 PLEKHF1Q96S99 279 aa33.7■■■□□ 2.99
ZNF558-203ENST00000595786 POLRMTO00411 1230 aaKnown RBP33.69■■■□□ 2.98
ZNF558-203ENST00000595786 A0A0G2JLW4 131 aa33.68■■■□□ 2.98
ZNF558-203ENST00000595786 KCNQ3O43525 872 aa33.68■■■□□ 2.98
ZNF558-203ENST00000595786 IL6STP40189 918 aaPredicted RBP33.68■■■□□ 2.98
ZNF558-203ENST00000595786 KIAA1551Q9HCM1 1747 aa33.67■■■□□ 2.98
ZNF558-203ENST00000595786 TAF7Q15545 349 aaPredicted RBP33.67■■■□□ 2.98
ZNF558-203ENST00000595786 BCL2L12Q9HB09 334 aa33.66■■■□□ 2.98
ZNF558-203ENST00000595786 DPEP1P16444 411 aa33.65■■■□□ 2.98
ZNF558-203ENST00000595786 DCTN1Q14203 1278 aa33.65■■■□□ 2.98
ZNF558-203ENST00000595786 NFIXQ14938 502 aa33.64■■■□□ 2.98
ZNF558-203ENST00000595786 NFE2L2Q16236 605 aa33.64■■■□□ 2.98
ZNF558-203ENST00000595786 N4BP2Q86UW6 1770 aaPredicted RBP33.63■■■□□ 2.97
ZNF558-203ENST00000595786 SNRPA1P09661 255 aaKnown RBP33.63■■■□□ 2.97
ZNF558-203ENST00000595786 NPM2Q86SE8 214 aaKnown RBP33.62■■■□□ 2.97
ZNF558-203ENST00000595786 PNISRQ8TF01 805 aaKnown RBP33.62■■■□□ 2.97
ZNF558-203ENST00000595786 WWC3Q9ULE0 1092 aa33.62■■■□□ 2.97
ZNF558-203ENST00000595786 MYBBP1AQ9BQG0 1328 aaKnown RBP33.61■■■□□ 2.97
ZNF558-203ENST00000595786 KCNA3P22001 575 aa33.61■■■□□ 2.97
ZNF558-203ENST00000595786 USP16Q9Y5T5 823 aa33.61■■■□□ 2.97
ZNF558-203ENST00000595786 MAPK8IP3Q9UPT6 1336 aa33.6■■■□□ 2.97
ZNF558-203ENST00000595786 A1BGP04217 495 aa33.6■■■□□ 2.97
ZNF558-203ENST00000595786 BCS1LQ9Y276 419 aa33.6■■■□□ 2.97
ZNF558-203ENST00000595786 PIM2Q9P1W9 311 aa33.59■■■□□ 2.97
ZNF558-203ENST00000595786 DLG5Q8TDM6 1919 aa33.58■■■□□ 2.97
ZNF558-203ENST00000595786 SERPINB2P05120 415 aa33.58■■■□□ 2.97
ZNF558-203ENST00000595786 BRCA1P38398 1863 aaKnown RBP33.56■■■□□ 2.96
ZNF558-203ENST00000595786 NRXN2Q9P2S2 1712 aa33.56■■■□□ 2.96
ZNF558-203ENST00000595786 TBC1D2BQ9UPU7 963 aa33.55■■■□□ 2.96
ZNF558-203ENST00000595786 ZNF330Q9Y3S2 320 aaPredicted RBP33.54■■■□□ 2.96
ZNF558-203ENST00000595786 ADCY9O60503 1353 aa33.54■■■□□ 2.96
ZNF558-203ENST00000595786 AFDNP55196 1824 aaKnown RBP33.53■■■□□ 2.96
ZNF558-203ENST00000595786 DALRD3Q5D0E6 543 aaKnown RBP33.52■■■□□ 2.96
ZNF558-203ENST00000595786 PRAMEF22A3QJZ6 481 aa33.51■■■□□ 2.95
ZNF558-203ENST00000595786 CAMTA2O94983 1202 aa33.5■■■□□ 2.95
ZNF558-203ENST00000595786 TBC1D9BQ66K14 1250 aa33.5■■■□□ 2.95
ZNF558-203ENST00000595786 DZIP3Q86Y13 1208 aaKnown RBP33.5■■■□□ 2.95
ZNF558-203ENST00000595786 MIS18AQ9NYP9 233 aa33.5■■■□□ 2.95
ZNF558-203ENST00000595786 ATP10DQ9P241 1426 aa33.5■■■□□ 2.95
ZNF558-203ENST00000595786 SCN7AQ01118 1682 aa33.49■■■□□ 2.95
ZNF558-203ENST00000595786 ARFGEF1Q9Y6D6 1849 aa33.49■■■□□ 2.95
ZNF558-203ENST00000595786 RGL2O15211 777 aa33.49■■■□□ 2.95
ZNF558-203ENST00000595786 CHRNA5P30532 468 aa33.49■■■□□ 2.95
ZNF558-203ENST00000595786 ZEB1P37275 1124 aaPredicted RBP33.49■■■□□ 2.95
ZNF558-203ENST00000595786 ARHGAP27Q6ZUM4 889 aa33.49■■■□□ 2.95
ZNF558-203ENST00000595786 CLEC4GQ6UXB4 293 aa33.48■■■□□ 2.95
ZNF558-203ENST00000595786 BICDL1Q6ZP65 573 aa33.48■■■□□ 2.95
ZNF558-203ENST00000595786 GIGYF1O75420 1035 aaPredicted RBP33.47■■■□□ 2.95
ZNF558-203ENST00000595786 PDZRN3Q9UPQ7 1066 aa33.47■■■□□ 2.95
ZNF558-203ENST00000595786 RIPK4P57078 832 aa33.46■■■□□ 2.95
ZNF558-203ENST00000595786 LMOD3Q0VAK6 560 aa33.46■■■□□ 2.95
ZNF558-203ENST00000595786 SETDB2Q96T68 719 aa33.46■■■□□ 2.95
ZNF558-203ENST00000595786 CARMIL3Q8ND23 1372 aa33.46■■■□□ 2.95
ZNF558-203ENST00000595786 C1QTNF8P60827 252 aa33.45■■■□□ 2.95
ZNF558-203ENST00000595786 EIF4A1P60842 406 aaKnown RBP33.45■■■□□ 2.95
ZNF558-203ENST00000595786 KDM3BQ7LBC6 1761 aa33.44■■■□□ 2.94
ZNF558-203ENST00000595786 NBPF26B4DH59 902 aa33.44■■■□□ 2.94
ZNF558-203ENST00000595786 TMPOP42166 694 aaKnown RBP33.44■■■□□ 2.94
ZNF558-203ENST00000595786 NBPF10Q6P3W6 841 aaKnown RBP33.44■■■□□ 2.94
ZNF558-203ENST00000595786 NBPF15Q8N660 670 aa33.44■■■□□ 2.94
ZNF558-203ENST00000595786 THUMPD2Q9BTF0 503 aaKnown RBP33.44■■■□□ 2.94
ZNF558-203ENST00000595786 PRKRIP1Q9H875 184 aaPredicted RBP33.44■■■□□ 2.94
ZNF558-203ENST00000595786 BABAM1Q9NWV8 329 aa33.44■■■□□ 2.94
ZNF558-203ENST00000595786 ZNF652Q9Y2D9 606 aa33.43■■■□□ 2.94
ZNF558-203ENST00000595786 BRIP1Q9BX63 1249 aa33.42■■■□□ 2.94
ZNF558-203ENST00000595786 GPBP1L1Q9HC44 474 aaPredicted RBP33.42■■■□□ 2.94
ZNF558-203ENST00000595786 H0YIN7 160 aa33.41■■■□□ 2.94
ZNF558-203ENST00000595786 PIP4K2AP48426 406 aaPredicted RBP33.41■■■□□ 2.94
ZNF558-203ENST00000595786 WDR43Q15061 677 aaKnown RBP eCLIP33.41■■■□□ 2.94
ZNF558-203ENST00000595786 BCORQ6W2J9 1755 aa33.4■■■□□ 2.94
ZNF558-203ENST00000595786 PDE6BP35913 854 aa33.4■■■□□ 2.94
ZNF558-203ENST00000595786 PRR5LQ6MZQ0 368 aa33.4■■■□□ 2.94
ZNF558-203ENST00000595786 C2CD5Q86YS7 1000 aa33.4■■■□□ 2.94
ZNF558-203ENST00000595786 RUNDC1Q96C34 613 aa33.39■■■□□ 2.94
ZNF558-203ENST00000595786 LAMB4A4D0S4 1761 aa33.39■■■□□ 2.94
ZNF558-203ENST00000595786 TTLL6Q8N841 843 aa33.38■■■□□ 2.93
ZNF558-203ENST00000595786 CNBD1Q8NA66 436 aa33.36■■■□□ 2.93
ZNF558-203ENST00000595786 TSPYL4Q9UJ04 414 aa33.36■■■□□ 2.93
ZNF558-203ENST00000595786 DLEC1Q9Y238 1755 aa33.36■■■□□ 2.93
ZNF558-203ENST00000595786 ADAMTS8Q9UP79 889 aa33.34■■■□□ 2.93
ZNF558-203ENST00000595786 ERBB4Q15303 1308 aa33.33■■■□□ 2.93
ZNF558-203ENST00000595786 ST5P78524 1137 aa33.33■■■□□ 2.93
ZNF558-203ENST00000595786 NPHP1O15259 732 aa33.32■■■□□ 2.92
ZNF558-203ENST00000595786 CCDC146Q8IYE0 955 aa33.32■■■□□ 2.92
ZNF558-203ENST00000595786 ANKRD31Q8N7Z5 1873 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms