RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 FLAD1Q8NFF5 587 aa17.08■□□□□ 0.32
CLPP-202ENST00000594780 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
CLPP-202ENST00000594780 NEFMP07197 916 aa17.07■□□□□ 0.32
CLPP-202ENST00000594780 ITPK1Q13572 414 aa17.07■□□□□ 0.32
CLPP-202ENST00000594780 NFE2L2Q16236 605 aa17.07■□□□□ 0.32
CLPP-202ENST00000594780 PHF14O94880 888 aa17.06■□□□□ 0.32
CLPP-202ENST00000594780 ATP6V1AP38606 617 aa17.06■□□□□ 0.32
CLPP-202ENST00000594780 SLC39A6Q13433 755 aa17.06■□□□□ 0.32
CLPP-202ENST00000594780 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
CLPP-202ENST00000594780 MCM10Q7L590 875 aa17.06■□□□□ 0.32
CLPP-202ENST00000594780 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
CLPP-202ENST00000594780 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
CLPP-202ENST00000594780 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
CLPP-202ENST00000594780 LINC00116Q8NCU8 138 aa17.05■□□□□ 0.32
CLPP-202ENST00000594780 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
CLPP-202ENST00000594780 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
CLPP-202ENST00000594780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.04■□□□□ 0.32
CLPP-202ENST00000594780 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
CLPP-202ENST00000594780 TEFQ10587 303 aa17.04■□□□□ 0.32
CLPP-202ENST00000594780 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
CLPP-202ENST00000594780 SIPA1L3O60292 1781 aaPredicted RBP17.04■□□□□ 0.32
CLPP-202ENST00000594780 C10orf71Q711Q0 1435 aa17.04■□□□□ 0.32
CLPP-202ENST00000594780 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
CLPP-202ENST00000594780 AK7Q96M32 723 aa17.03■□□□□ 0.32
CLPP-202ENST00000594780 C4AP0C0L4 1744 aa17.03■□□□□ 0.32
CLPP-202ENST00000594780 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
CLPP-202ENST00000594780 HSPA1AP0DMV8 641 aaKnown RBP17.02■□□□□ 0.32
CLPP-202ENST00000594780 HSPA1BP0DMV9 641 aaKnown RBP17.02■□□□□ 0.32
CLPP-202ENST00000594780 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
CLPP-202ENST00000594780 FSTL1Q12841 308 aa17.02■□□□□ 0.32
CLPP-202ENST00000594780 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
CLPP-202ENST00000594780 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
CLPP-202ENST00000594780 RIPK4P57078 832 aa17.01■□□□□ 0.31
CLPP-202ENST00000594780 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
CLPP-202ENST00000594780 BTBD11A6QL63 1104 aa17■□□□□ 0.31
CLPP-202ENST00000594780 KCNQ3O43525 872 aa17■□□□□ 0.31
CLPP-202ENST00000594780 ZNF790Q6PG37 636 aa17■□□□□ 0.31
CLPP-202ENST00000594780 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
CLPP-202ENST00000594780 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
CLPP-202ENST00000594780 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
CLPP-202ENST00000594780 ARHGAP27Q6ZUM4 889 aa16.99■□□□□ 0.31
CLPP-202ENST00000594780 UBR2Q8IWV8 1755 aa16.98■□□□□ 0.31
CLPP-202ENST00000594780 MMP10P09238 476 aa16.98■□□□□ 0.31
CLPP-202ENST00000594780 SSFA2P28290 1259 aa16.98■□□□□ 0.31
CLPP-202ENST00000594780 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
CLPP-202ENST00000594780 C9orf131Q5VYM1 1079 aa16.98■□□□□ 0.31
CLPP-202ENST00000594780 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
CLPP-202ENST00000594780 TTC5Q8N0Z6 440 aa16.98■□□□□ 0.31
CLPP-202ENST00000594780 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
CLPP-202ENST00000594780 COL5A3P25940 1745 aaPredicted RBP16.98■□□□□ 0.31
CLPP-202ENST00000594780 TJP1Q07157 1748 aa16.98■□□□□ 0.31
CLPP-202ENST00000594780 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
CLPP-202ENST00000594780 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
CLPP-202ENST00000594780 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
CLPP-202ENST00000594780 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
CLPP-202ENST00000594780 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
CLPP-202ENST00000594780 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
CLPP-202ENST00000594780 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
CLPP-202ENST00000594780 MYH14Q7Z406 1995 aaKnown RBP16.97■□□□□ 0.31
CLPP-202ENST00000594780 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.31
CLPP-202ENST00000594780 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.31
CLPP-202ENST00000594780 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.3
CLPP-202ENST00000594780 APAF1O14727 1248 aa16.95■□□□□ 0.3
CLPP-202ENST00000594780 GNPATO15228 680 aa16.95■□□□□ 0.3
CLPP-202ENST00000594780 DPEP1P16444 411 aa16.95■□□□□ 0.3
CLPP-202ENST00000594780 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
CLPP-202ENST00000594780 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
CLPP-202ENST00000594780 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
CLPP-202ENST00000594780 TGFB2P61812 414 aa16.94■□□□□ 0.3
CLPP-202ENST00000594780 LMOD3Q0VAK6 560 aa16.94■□□□□ 0.3
CLPP-202ENST00000594780 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
CLPP-202ENST00000594780 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
CLPP-202ENST00000594780 RRAGCQ9HB90 399 aa16.94■□□□□ 0.3
CLPP-202ENST00000594780 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
CLPP-202ENST00000594780 KCNA3P22001 575 aa16.92■□□□□ 0.3
CLPP-202ENST00000594780 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
CLPP-202ENST00000594780 RTCBQ9Y3I0 505 aaKnown RBP16.92■□□□□ 0.3
CLPP-202ENST00000594780 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
CLPP-202ENST00000594780 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
CLPP-202ENST00000594780 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
CLPP-202ENST00000594780 KDM3BQ7LBC6 1761 aa16.9■□□□□ 0.3
CLPP-202ENST00000594780 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
CLPP-202ENST00000594780 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
CLPP-202ENST00000594780 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
CLPP-202ENST00000594780 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
CLPP-202ENST00000594780 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
CLPP-202ENST00000594780 STARD3NLO95772 234 aa16.89■□□□□ 0.29
CLPP-202ENST00000594780 SNRPA1P09661 255 aaKnown RBP16.89■□□□□ 0.29
CLPP-202ENST00000594780 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
CLPP-202ENST00000594780 BABAM1Q9NWV8 329 aa16.89■□□□□ 0.29
CLPP-202ENST00000594780 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
CLPP-202ENST00000594780 CHL1O00533 1208 aa16.88■□□□□ 0.29
CLPP-202ENST00000594780 ADRA2BP18089 450 aa16.88■□□□□ 0.29
CLPP-202ENST00000594780 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
CLPP-202ENST00000594780 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
CLPP-202ENST00000594780 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
CLPP-202ENST00000594780 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
CLPP-202ENST00000594780 A1BGP04217 495 aa16.86■□□□□ 0.29
CLPP-202ENST00000594780 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
CLPP-202ENST00000594780 RFC4P35249 363 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms