RNA–Protein interactions for RNA: ENST00000594523.5

CALM3-206, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-206ENST00000594523 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
CALM3-206ENST00000594523 COL15A1P39059 1388 aa16.49■□□□□ 0.23
CALM3-206ENST00000594523 CHRNA5P30532 468 aa16.48■□□□□ 0.23
CALM3-206ENST00000594523 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
CALM3-206ENST00000594523 POLRMTO00411 1230 aaKnown RBP16.47■□□□□ 0.23
CALM3-206ENST00000594523 U2AF1L5P0DN76 240 aaPredicted RBP16.47■□□□□ 0.23
CALM3-206ENST00000594523 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
CALM3-206ENST00000594523 U2AF1Q01081 240 aaKnown RBP eCLIP16.47■□□□□ 0.23
CALM3-206ENST00000594523 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
CALM3-206ENST00000594523 KCNA3P22001 575 aa16.46■□□□□ 0.23
CALM3-206ENST00000594523 BICDL1Q6ZP65 573 aa16.46■□□□□ 0.23
CALM3-206ENST00000594523 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
CALM3-206ENST00000594523 TM4SF1P30408 202 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 NFIXQ14938 502 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 PIM2Q9P1W9 311 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 NARFQ9UHQ1 456 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
CALM3-206ENST00000594523 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
CALM3-206ENST00000594523 KCNQ3O43525 872 aa16.44■□□□□ 0.22
CALM3-206ENST00000594523 STARD3NLO95772 234 aa16.44■□□□□ 0.22
CALM3-206ENST00000594523 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
CALM3-206ENST00000594523 HEG1Q9ULI3 1381 aa16.43■□□□□ 0.22
CALM3-206ENST00000594523 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
CALM3-206ENST00000594523 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
CALM3-206ENST00000594523 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
CALM3-206ENST00000594523 MCM10Q7L590 875 aa16.42■□□□□ 0.22
CALM3-206ENST00000594523 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
CALM3-206ENST00000594523 SERPINB2P05120 415 aa16.41■□□□□ 0.22
CALM3-206ENST00000594523 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
CALM3-206ENST00000594523 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
CALM3-206ENST00000594523 CEMIPQ8WUJ3 1361 aa16.4■□□□□ 0.22
CALM3-206ENST00000594523 BRCA1P38398 1863 aaKnown RBP16.4■□□□□ 0.22
CALM3-206ENST00000594523 A1BGP04217 495 aa16.4■□□□□ 0.22
CALM3-206ENST00000594523 EIF5P55010 431 aaKnown RBP16.4■□□□□ 0.22
CALM3-206ENST00000594523 C9orf131Q5VYM1 1079 aa16.4■□□□□ 0.22
CALM3-206ENST00000594523 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
CALM3-206ENST00000594523 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
CALM3-206ENST00000594523 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
CALM3-206ENST00000594523 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
CALM3-206ENST00000594523 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
CALM3-206ENST00000594523 A0A087WZG4 1122 aa16.38■□□□□ 0.21
CALM3-206ENST00000594523 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
CALM3-206ENST00000594523 KIF3CO14782 793 aa16.38■□□□□ 0.21
CALM3-206ENST00000594523 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
CALM3-206ENST00000594523 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
CALM3-206ENST00000594523 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
CALM3-206ENST00000594523 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
CALM3-206ENST00000594523 NMRK2Q9NPI5 230 aa16.37■□□□□ 0.21
CALM3-206ENST00000594523 RNF181Q9P0P0 153 aa16.37■□□□□ 0.21
CALM3-206ENST00000594523 RASSF7Q02833 373 aa16.36■□□□□ 0.21
CALM3-206ENST00000594523 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
CALM3-206ENST00000594523 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
CALM3-206ENST00000594523 NPHP1O15259 732 aa16.35■□□□□ 0.21
CALM3-206ENST00000594523 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
CALM3-206ENST00000594523 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
CALM3-206ENST00000594523 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
CALM3-206ENST00000594523 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
CALM3-206ENST00000594523 NRXN2Q9P2S2 1712 aa16.34■□□□□ 0.21
CALM3-206ENST00000594523 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CALM3-206ENST00000594523 H0YIN7 160 aa16.33■□□□□ 0.2
CALM3-206ENST00000594523 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
CALM3-206ENST00000594523 NEFMP07197 916 aa16.33■□□□□ 0.2
CALM3-206ENST00000594523 HSPA6P17066 643 aa16.33■□□□□ 0.2
CALM3-206ENST00000594523 ZNF622Q969S3 477 aaKnown RBP eCLIP16.33■□□□□ 0.2
CALM3-206ENST00000594523 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
CALM3-206ENST00000594523 PRR5LQ6MZQ0 368 aa16.32■□□□□ 0.2
CALM3-206ENST00000594523 TTLL6Q8N841 843 aa16.32■□□□□ 0.2
CALM3-206ENST00000594523 THUMPD2Q9BTF0 503 aaKnown RBP16.32■□□□□ 0.2
CALM3-206ENST00000594523 CNBD1Q8NA66 436 aa16.31■□□□□ 0.2
CALM3-206ENST00000594523 SETDB2Q96T68 719 aa16.31■□□□□ 0.2
CALM3-206ENST00000594523 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
CALM3-206ENST00000594523 FAM177BA6PVY3 158 aa16.29■□□□□ 0.2
CALM3-206ENST00000594523 TOMM70O94826 608 aa16.29■□□□□ 0.2
CALM3-206ENST00000594523 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
CALM3-206ENST00000594523 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
CALM3-206ENST00000594523 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 KDM2BQ8NHM5 1336 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
CALM3-206ENST00000594523 C21orf2O43822 256 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 PDE6BP35913 854 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 PRELPP51888 382 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 ST5P78524 1137 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
CALM3-206ENST00000594523 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 BRIP1Q9BX63 1249 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 ANKRD31Q8N7Z5 1873 aa16.28■□□□□ 0.2
CALM3-206ENST00000594523 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
CALM3-206ENST00000594523 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
CALM3-206ENST00000594523 BCORQ6W2J9 1755 aa16.27■□□□□ 0.2
CALM3-206ENST00000594523 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
CALM3-206ENST00000594523 NFKBIEO00221 500 aa16.26■□□□□ 0.19
CALM3-206ENST00000594523 LMNB1P20700 586 aa16.26■□□□□ 0.19
CALM3-206ENST00000594523 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
CALM3-206ENST00000594523 NBPF5PQ86XG9 351 aaPredicted RBP16.26■□□□□ 0.19
CALM3-206ENST00000594523 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
CALM3-206ENST00000594523 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms