RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 LMCD1Q9NZU5 365 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 PNMA2Q9UL42 364 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 V9GYY5 206 aaPredicted RBP8.69□□□□□ -1.02
LINC00347-202ENST00000594461 FHAD1B1AJZ9 1412 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 IVLP07476 585 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 PECAM1P16284 738 aaPredicted RBP8.69□□□□□ -1.02
LINC00347-202ENST00000594461 CHMLP26374 656 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 KMT5BQ4FZB7 885 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 A1CFQ9NQ94 594 aaKnown RBP8.69□□□□□ -1.02
LINC00347-202ENST00000594461 AKAP2Q9Y2D5 859 aa8.69□□□□□ -1.02
LINC00347-202ENST00000594461 CUL7Q14999 1698 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 ZSCAN9O15535 394 aaPredicted RBP8.68□□□□□ -1.02
LINC00347-202ENST00000594461 NEDD9Q14511 834 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 ZRSR1Q15695 479 aaKnown RBP8.68□□□□□ -1.02
LINC00347-202ENST00000594461 MAMSTRQ6ZN01 415 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 TRIM42Q8IWZ5 723 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 ELOA2Q8IYF1 753 aaPredicted RBP8.68□□□□□ -1.02
LINC00347-202ENST00000594461 IRF2BPLQ9H1B7 796 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 SHTN1A0MZ66 631 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 U2AF1L5P0DN76 240 aaPredicted RBP8.68□□□□□ -1.02
LINC00347-202ENST00000594461 DDIT3P35638 169 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 U2AF1Q01081 240 aaKnown RBP eCLIP8.68□□□□□ -1.02
LINC00347-202ENST00000594461 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
LINC00347-202ENST00000594461 ZSCAN16Q9H4T2 348 aaPredicted RBP8.68□□□□□ -1.02
LINC00347-202ENST00000594461 FMNL1O95466 1100 aaPredicted RBP8.67□□□□□ -1.02
LINC00347-202ENST00000594461 CORO7P57737 925 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 ZSCAN23Q3MJ62 389 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 CLEC17AQ6ZS10 378 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 ARL10Q8N8L6 244 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 FAM163AQ96GL9 167 aaPredicted RBP8.67□□□□□ -1.02
LINC00347-202ENST00000594461 PICK1Q9NRD5 415 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
LINC00347-202ENST00000594461 GRIN2AQ12879 1464 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 CHD1O14646 1710 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 CNTLNQ9NXG0 1405 aa8.67□□□□□ -1.02
LINC00347-202ENST00000594461 SMTNL1A8MU46 457 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 SEC24BO95487 1268 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 PYGLP06737 847 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 TPP2P29144 1249 aaPredicted RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 GOLGA2Q08379 1002 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 SF3B2Q13435 895 aaKnown RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 RAB3GAP1Q15042 981 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 TEKT1Q969V4 418 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 MRFAP1L1Q96HT8 127 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 CLIP1P30622 1438 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 EME2A4GXA9 379 aaPredicted RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 BAG4O95429 457 aaKnown RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 TRPC1P48995 793 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 INF2Q27J81 1249 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 ZFYVE27Q5T4F4 411 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 ANKRD18AQ8IVF6 992 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 POLR3CQ9BUI4 534 aaPredicted RBP8.66□□□□□ -1.02
LINC00347-202ENST00000594461 SYNJ2O15056 1496 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 CCDC144AA2RUR9 1427 aa8.66□□□□□ -1.02
LINC00347-202ENST00000594461 MAGI1Q96QZ7 1491 aaPredicted RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 KIF5CO60282 957 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 NAT2P11245 290 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 PRIM1P49642 420 aaKnown RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 CTCFLQ8NI51 663 aaPredicted RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 AK7Q96M32 723 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 ZNF24P17028 368 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 E2F5Q15329 346 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 ACBD5Q5T8D3 534 aaPredicted RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 SAMD3Q8N6K7 520 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 LSM14AQ8ND56 463 aaKnown RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 TBC1D5Q92609 795 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 SMARCE1Q969G3 411 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 TRIM7Q9C029 511 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 UNC45AQ9H3U1 944 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 PUF60Q9UHX1 559 aaKnown RBP8.65□□□□□ -1.02
LINC00347-202ENST00000594461 CEP170Q5SW79 1584 aa8.65□□□□□ -1.02
LINC00347-202ENST00000594461 PTPRCP08575 1304 aa8.65□□□□□ -1.03
LINC00347-202ENST00000594461 ARHGAP31Q2M1Z3 1444 aa8.65□□□□□ -1.03
LINC00347-202ENST00000594461 NCOA3Q9Y6Q9 1424 aa8.65□□□□□ -1.03
LINC00347-202ENST00000594461 HTATSF1O43719 755 aaKnown RBP8.64□□□□□ -1.03
LINC00347-202ENST00000594461 RTN2O75298 545 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 PYGBP11216 843 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 VCAM1P19320 739 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 DBN1Q16643 649 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 AKNAD1Q5T1N1 836 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 LRRC31Q6UY01 552 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 C17orf53Q8N3J3 647 aaPredicted RBP8.64□□□□□ -1.03
LINC00347-202ENST00000594461 C3orf20Q8ND61 904 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 SRRTQ9BXP5 876 aaKnown RBP8.64□□□□□ -1.03
LINC00347-202ENST00000594461 PSD3Q9NYI0 1048 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 RABL2BQ9UNT1 228 aa8.64□□□□□ -1.03
LINC00347-202ENST00000594461 THRAP3Q9Y2W1 955 aaKnown RBP8.64□□□□□ -1.03
LINC00347-202ENST00000594461 CTDP1Q9Y5B0 961 aaPredicted RBP8.64□□□□□ -1.03
LINC00347-202ENST00000594461 XBP1P17861 261 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms