RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ZBTB1Q9Y2K1 713 aa23.64■■□□□ 1.37
SHKBP1-203ENST00000594298 COL3A1P02461 1466 aaPredicted RBP23.63■■□□□ 1.37
SHKBP1-203ENST00000594298 TOMM70O94826 608 aa23.63■■□□□ 1.37
SHKBP1-203ENST00000594298 C9orf131Q5VYM1 1079 aa23.63■■□□□ 1.37
SHKBP1-203ENST00000594298 ARFGEF1Q9Y6D6 1849 aa23.63■■□□□ 1.37
SHKBP1-203ENST00000594298 CHRNA5P30532 468 aa23.62■■□□□ 1.37
SHKBP1-203ENST00000594298 NFIXQ14938 502 aa23.62■■□□□ 1.37
SHKBP1-203ENST00000594298 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
SHKBP1-203ENST00000594298 NMRK2Q9NPI5 230 aa23.6■■□□□ 1.37
SHKBP1-203ENST00000594298 TTC5Q8N0Z6 440 aa23.59■■□□□ 1.37
SHKBP1-203ENST00000594298 GAS2L2Q8NHY3 880 aa23.59■■□□□ 1.37
SHKBP1-203ENST00000594298 UBR2Q8IWV8 1755 aa23.58■■□□□ 1.37
SHKBP1-203ENST00000594298 STARD3NLO95772 234 aa23.58■■□□□ 1.37
SHKBP1-203ENST00000594298 APLP1P51693 650 aa23.58■■□□□ 1.37
SHKBP1-203ENST00000594298 NRXN2Q9P2S2 1712 aa23.57■■□□□ 1.36
SHKBP1-203ENST00000594298 GNAT3A8MTJ3 354 aa23.57■■□□□ 1.36
SHKBP1-203ENST00000594298 U2SURPO15042 1029 aaKnown RBP23.57■■□□□ 1.36
SHKBP1-203ENST00000594298 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
SHKBP1-203ENST00000594298 IL17REQ8NFR9 667 aa23.57■■□□□ 1.36
SHKBP1-203ENST00000594298 SERPINB2P05120 415 aa23.56■■□□□ 1.36
SHKBP1-203ENST00000594298 CANXP27824 592 aaKnown RBP23.56■■□□□ 1.36
SHKBP1-203ENST00000594298 RNF181Q9P0P0 153 aa23.56■■□□□ 1.36
SHKBP1-203ENST00000594298 VIRMAQ69YN4 1812 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 A0A087WZG4 1122 aa23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 TEFQ10587 303 aa23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 ZNF790Q6PG37 636 aa23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 ZNF496Q96IT1 587 aaPredicted RBP23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 TEX13AQ9BXU3 409 aaPredicted RBP23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 KDM2BQ8NHM5 1336 aa23.55■■□□□ 1.36
SHKBP1-203ENST00000594298 HEG1Q9ULI3 1381 aa23.54■■□□□ 1.36
SHKBP1-203ENST00000594298 IFFO2Q5TF58 517 aa23.54■■□□□ 1.36
SHKBP1-203ENST00000594298 RBM46Q8TBY0 533 aaKnown RBP23.54■■□□□ 1.36
SHKBP1-203ENST00000594298 ZC3H4Q9UPT8 1303 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-203ENST00000594298 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
SHKBP1-203ENST00000594298 AFDNP55196 1824 aaKnown RBP23.5■■□□□ 1.35
SHKBP1-203ENST00000594298 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
SHKBP1-203ENST00000594298 TTLL6Q8N841 843 aa23.5■■□□□ 1.35
SHKBP1-203ENST00000594298 IL6STP40189 918 aaPredicted RBP23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 FSTL1Q12841 308 aa23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 CNGB1Q14028 1251 aaPredicted RBP23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 DNAJC5GQ8N7S2 189 aa23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 FMNL2Q96PY5 1086 aa23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 CARMIL3Q8ND23 1372 aa23.49■■□□□ 1.35
SHKBP1-203ENST00000594298 H0YIN7 160 aa23.48■■□□□ 1.35
SHKBP1-203ENST00000594298 CFAP53Q96M91 514 aa23.48■■□□□ 1.35
SHKBP1-203ENST00000594298 RSPH6AQ9H0K4 717 aa23.48■■□□□ 1.35
SHKBP1-203ENST00000594298 SIPA1L3O60292 1781 aaPredicted RBP23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 DLEC1Q9Y238 1755 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 LMNB1P20700 586 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 RASSF7Q02833 373 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 TBC1D9BQ66K14 1250 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 BICDL1Q6ZP65 573 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 PHACTR3Q96KR7 559 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 PDZRN3Q9UPQ7 1066 aa23.47■■□□□ 1.35
SHKBP1-203ENST00000594298 BRIP1Q9BX63 1249 aa23.46■■□□□ 1.35
SHKBP1-203ENST00000594298 RRAGCQ9HB90 399 aa23.46■■□□□ 1.35
SHKBP1-203ENST00000594298 SCN7AQ01118 1682 aa23.45■■□□□ 1.34
SHKBP1-203ENST00000594298 TBC1D2BQ9UPU7 963 aa23.45■■□□□ 1.34
SHKBP1-203ENST00000594298 SBF1O95248 1867 aa23.45■■□□□ 1.34
SHKBP1-203ENST00000594298 BTBD11A6QL63 1104 aa23.44■■□□□ 1.34
SHKBP1-203ENST00000594298 PRELPP51888 382 aa23.44■■□□□ 1.34
SHKBP1-203ENST00000594298 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
SHKBP1-203ENST00000594298 A1BGP04217 495 aa23.43■■□□□ 1.34
SHKBP1-203ENST00000594298 PDE6BP35913 854 aa23.43■■□□□ 1.34
SHKBP1-203ENST00000594298 TNRC6CQ9HCJ0 1690 aaKnown RBP23.43■■□□□ 1.34
SHKBP1-203ENST00000594298 GLTPD2A6NH11 291 aa23.42■■□□□ 1.34
SHKBP1-203ENST00000594298 NFKBIEO00221 500 aa23.42■■□□□ 1.34
SHKBP1-203ENST00000594298 KCNQ3O43525 872 aa23.42■■□□□ 1.34
SHKBP1-203ENST00000594298 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
SHKBP1-203ENST00000594298 PRR5LQ6MZQ0 368 aa23.42■■□□□ 1.34
SHKBP1-203ENST00000594298 ZNF330Q9Y3S2 320 aaPredicted RBP23.42■■□□□ 1.34
SHKBP1-203ENST00000594298 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
SHKBP1-203ENST00000594298 PPP2R1AP30153 589 aa23.4■■□□□ 1.34
SHKBP1-203ENST00000594298 SETDB2Q96T68 719 aa23.4■■□□□ 1.34
SHKBP1-203ENST00000594298 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.33
SHKBP1-203ENST00000594298 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.33
SHKBP1-203ENST00000594298 SMC1BQ8NDV3 1235 aa23.39■■□□□ 1.33
SHKBP1-203ENST00000594298 ZNF622Q969S3 477 aaKnown RBP eCLIP23.39■■□□□ 1.33
SHKBP1-203ENST00000594298 WDR90Q96KV7 1748 aa23.39■■□□□ 1.33
SHKBP1-203ENST00000594298 VEGFAP15692 232 aaPredicted RBP23.38■■□□□ 1.33
SHKBP1-203ENST00000594298 DZIP3Q86Y13 1208 aaKnown RBP23.38■■□□□ 1.33
SHKBP1-203ENST00000594298 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
SHKBP1-203ENST00000594298 RTF1Q92541 710 aaKnown RBP23.38■■□□□ 1.33
SHKBP1-203ENST00000594298 USP16Q9Y5T5 823 aa23.38■■□□□ 1.33
SHKBP1-203ENST00000594298 ANKRD31Q8N7Z5 1873 aa23.37■■□□□ 1.33
SHKBP1-203ENST00000594298 HTATSF1O43719 755 aaKnown RBP23.36■■□□□ 1.33
SHKBP1-203ENST00000594298 SNRPA1P09661 255 aaKnown RBP23.36■■□□□ 1.33
SHKBP1-203ENST00000594298 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
SHKBP1-203ENST00000594298 KLRG1Q96E93 195 aa23.36■■□□□ 1.33
SHKBP1-203ENST00000594298 C21orf2O43822 256 aa23.35■■□□□ 1.33
SHKBP1-203ENST00000594298 ST5P78524 1137 aa23.35■■□□□ 1.33
SHKBP1-203ENST00000594298 STYK1Q6J9G0 422 aa23.35■■□□□ 1.33
SHKBP1-203ENST00000594298 MCM10Q7L590 875 aa23.35■■□□□ 1.33
SHKBP1-203ENST00000594298 CCDC24Q8N4L8 307 aa23.35■■□□□ 1.33
SHKBP1-203ENST00000594298 LTBP3Q9NS15 1303 aa23.34■■□□□ 1.33
SHKBP1-203ENST00000594298 PRAMEF22A3QJZ6 481 aa23.34■■□□□ 1.33
SHKBP1-203ENST00000594298 RGL2O15211 777 aa23.34■■□□□ 1.33
SHKBP1-203ENST00000594298 SRGNP10124 158 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms