RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 SLC52A2Q9HAB3 445 aa21.03■□□□□ 0.96
USHBP1-204ENST00000594190 SALL2Q9Y467 1007 aaPredicted RBP21.03■□□□□ 0.96
USHBP1-204ENST00000594190 LMOD3Q0VAK6 560 aa21.02■□□□□ 0.96
USHBP1-204ENST00000594190 MTHFSDQ2M296 383 aaKnown RBP21.02■□□□□ 0.96
USHBP1-204ENST00000594190 RTCBQ9Y3I0 505 aaKnown RBP21.02■□□□□ 0.96
USHBP1-204ENST00000594190 ATP10DQ9P241 1426 aa21.02■□□□□ 0.96
USHBP1-204ENST00000594190 E9PSI1 815 aa21.01■□□□□ 0.95
USHBP1-204ENST00000594190 RNMTO43148 476 aaKnown RBP21.01■□□□□ 0.95
USHBP1-204ENST00000594190 WWC1Q8IX03 1113 aa21.01■□□□□ 0.95
USHBP1-204ENST00000594190 GPBP1L1Q9HC44 474 aaPredicted RBP21.01■□□□□ 0.95
USHBP1-204ENST00000594190 GYS1P13807 737 aa21■□□□□ 0.95
USHBP1-204ENST00000594190 NFE2L2Q16236 605 aa21■□□□□ 0.95
USHBP1-204ENST00000594190 TRAPPC3LQ5T215 181 aa21■□□□□ 0.95
USHBP1-204ENST00000594190 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
USHBP1-204ENST00000594190 C10orf71Q711Q0 1435 aa20.99■□□□□ 0.95
USHBP1-204ENST00000594190 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
USHBP1-204ENST00000594190 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
USHBP1-204ENST00000594190 CALD1Q05682 793 aaKnown RBP20.99■□□□□ 0.95
USHBP1-204ENST00000594190 MMP10P09238 476 aa20.98■□□□□ 0.95
USHBP1-204ENST00000594190 INTS5Q6P9B9 1019 aaKnown RBP20.98■□□□□ 0.95
USHBP1-204ENST00000594190 IL16Q14005 1332 aa20.98■□□□□ 0.95
USHBP1-204ENST00000594190 RIPK4P57078 832 aa20.97■□□□□ 0.95
USHBP1-204ENST00000594190 ADCY9O60503 1353 aa20.97■□□□□ 0.95
USHBP1-204ENST00000594190 SLFN5Q08AF3 891 aa20.96■□□□□ 0.95
USHBP1-204ENST00000594190 NLGN1Q8N2Q7 840 aa20.96■□□□□ 0.95
USHBP1-204ENST00000594190 NRXN2Q9P2S2 1712 aa20.95■□□□□ 0.94
USHBP1-204ENST00000594190 ARFGEF1Q9Y6D6 1849 aa20.95■□□□□ 0.94
USHBP1-204ENST00000594190 NEUROD2Q15784 382 aa20.95■□□□□ 0.94
USHBP1-204ENST00000594190 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
USHBP1-204ENST00000594190 RRP7AQ9Y3A4 280 aaKnown RBP20.95■□□□□ 0.94
USHBP1-204ENST00000594190 AFDNP55196 1824 aaKnown RBP20.94■□□□□ 0.94
USHBP1-204ENST00000594190 SLC39A6Q13433 755 aa20.94■□□□□ 0.94
USHBP1-204ENST00000594190 TRMT2AQ8IZ69 625 aaKnown RBP20.94■□□□□ 0.94
USHBP1-204ENST00000594190 ZNF526Q8TF50 670 aaPredicted RBP20.94■□□□□ 0.94
USHBP1-204ENST00000594190 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
USHBP1-204ENST00000594190 USP42Q9H9J4 1324 aaKnown RBP20.94■□□□□ 0.94
USHBP1-204ENST00000594190 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
USHBP1-204ENST00000594190 HSPA6P17066 643 aa20.93■□□□□ 0.94
USHBP1-204ENST00000594190 DNAJC10Q8IXB1 793 aa20.93■□□□□ 0.94
USHBP1-204ENST00000594190 MYH16Q9H6N6 1097 aa20.93■□□□□ 0.94
USHBP1-204ENST00000594190 CEP350Q5VT06 3117 aa20.92■□□□□ 0.94
USHBP1-204ENST00000594190 RFC4P35249 363 aa20.92■□□□□ 0.94
USHBP1-204ENST00000594190 IL17REQ8NFR9 667 aa20.92■□□□□ 0.94
USHBP1-204ENST00000594190 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
USHBP1-204ENST00000594190 CEMIPQ8WUJ3 1361 aa20.92■□□□□ 0.94
USHBP1-204ENST00000594190 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
USHBP1-204ENST00000594190 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
USHBP1-204ENST00000594190 DUSP27Q5VZP5 1158 aa20.91■□□□□ 0.94
USHBP1-204ENST00000594190 DLG5Q8TDM6 1919 aa20.91■□□□□ 0.94
USHBP1-204ENST00000594190 CDCA7LQ96GN5 454 aa20.91■□□□□ 0.94
USHBP1-204ENST00000594190 SRP68Q9UHB9 627 aaKnown RBP20.91■□□□□ 0.94
USHBP1-204ENST00000594190 TGFB2P61812 414 aa20.9■□□□□ 0.94
USHBP1-204ENST00000594190 VSIG10Q8N0Z9 540 aa20.9■□□□□ 0.94
USHBP1-204ENST00000594190 KCNA3P22001 575 aa20.89■□□□□ 0.93
USHBP1-204ENST00000594190 DDR1Q08345 913 aa20.89■□□□□ 0.93
USHBP1-204ENST00000594190 FKBP8Q14318 412 aa20.89■□□□□ 0.93
USHBP1-204ENST00000594190 CCDC87Q9NVE4 849 aa20.89■□□□□ 0.93
USHBP1-204ENST00000594190 DLEC1Q9Y238 1755 aa20.88■□□□□ 0.93
USHBP1-204ENST00000594190 TM4SF1P30408 202 aa20.88■□□□□ 0.93
USHBP1-204ENST00000594190 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
USHBP1-204ENST00000594190 NEFLP07196 543 aa20.87■□□□□ 0.93
USHBP1-204ENST00000594190 SCN7AQ01118 1682 aa20.86■□□□□ 0.93
USHBP1-204ENST00000594190 GNAT3A8MTJ3 354 aa20.86■□□□□ 0.93
USHBP1-204ENST00000594190 ZBTB1Q9Y2K1 713 aa20.86■□□□□ 0.93
USHBP1-204ENST00000594190 A0A0G2JLW4 131 aa20.85■□□□□ 0.93
USHBP1-204ENST00000594190 POLRMTO00411 1230 aaKnown RBP20.85■□□□□ 0.93
USHBP1-204ENST00000594190 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
USHBP1-204ENST00000594190 BCL2L12Q9HB09 334 aa20.85■□□□□ 0.93
USHBP1-204ENST00000594190 COL15A1P39059 1388 aa20.85■□□□□ 0.93
USHBP1-204ENST00000594190 GNAI1P63096 354 aa20.84■□□□□ 0.93
USHBP1-204ENST00000594190 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
USHBP1-204ENST00000594190 IFT57Q9NWB7 429 aa20.84■□□□□ 0.93
USHBP1-204ENST00000594190 RCAN3Q9UKA8 241 aa20.84■□□□□ 0.93
USHBP1-204ENST00000594190 PARP3Q9Y6F1 533 aa20.84■□□□□ 0.93
USHBP1-204ENST00000594190 SBF1O95248 1867 aa20.84■□□□□ 0.93
USHBP1-204ENST00000594190 DPEP1P16444 411 aa20.83■□□□□ 0.93
USHBP1-204ENST00000594190 ZNF790Q6PG37 636 aa20.83■□□□□ 0.93
USHBP1-204ENST00000594190 ZNF496Q96IT1 587 aaPredicted RBP20.83■□□□□ 0.93
USHBP1-204ENST00000594190 NARFQ9UHQ1 456 aa20.83■□□□□ 0.93
USHBP1-204ENST00000594190 HEG1Q9ULI3 1381 aa20.83■□□□□ 0.92
USHBP1-204ENST00000594190 BCORQ6W2J9 1755 aa20.82■□□□□ 0.92
USHBP1-204ENST00000594190 USPL1Q5W0Q7 1092 aa20.82■□□□□ 0.92
USHBP1-204ENST00000594190 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
USHBP1-204ENST00000594190 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
USHBP1-204ENST00000594190 EIF5P55010 431 aaKnown RBP20.81■□□□□ 0.92
USHBP1-204ENST00000594190 SPINK5Q9NQ38 1064 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-204ENST00000594190 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
USHBP1-204ENST00000594190 KIF3CO14782 793 aa20.8■□□□□ 0.92
USHBP1-204ENST00000594190 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
USHBP1-204ENST00000594190 NFIXQ14938 502 aa20.79■□□□□ 0.92
USHBP1-204ENST00000594190 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
USHBP1-204ENST00000594190 KCNQ3O43525 872 aa20.78■□□□□ 0.92
USHBP1-204ENST00000594190 TEFQ10587 303 aa20.78■□□□□ 0.92
USHBP1-204ENST00000594190 ERICH6BQ5W0A0 696 aa20.78■□□□□ 0.92
USHBP1-204ENST00000594190 BABAM1Q9NWV8 329 aa20.78■□□□□ 0.92
USHBP1-204ENST00000594190 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
USHBP1-204ENST00000594190 ZPR1O75312 459 aa20.77■□□□□ 0.92
USHBP1-204ENST00000594190 ZNF853P0CG23 659 aa20.77■□□□□ 0.92
USHBP1-204ENST00000594190 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
USHBP1-204ENST00000594190 BCS1LQ9Y276 419 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms