RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
SMG9-202ENST00000594081 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
SMG9-202ENST00000594081 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
SMG9-202ENST00000594081 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
SMG9-202ENST00000594081 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
SMG9-202ENST00000594081 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
SMG9-202ENST00000594081 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
SMG9-202ENST00000594081 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
SMG9-202ENST00000594081 COL15A1P39059 1388 aa11.74□□□□□ -0.53
SMG9-202ENST00000594081 MRC1P22897 1456 aa11.74□□□□□ -0.53
SMG9-202ENST00000594081 NFKBIEO00221 500 aa11.73□□□□□ -0.53
SMG9-202ENST00000594081 ZPR1O75312 459 aa11.73□□□□□ -0.53
SMG9-202ENST00000594081 MTHFSP49914 203 aa11.73□□□□□ -0.53
SMG9-202ENST00000594081 AMOTQ4VCS5 1084 aa11.73□□□□□ -0.53
SMG9-202ENST00000594081 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
SMG9-202ENST00000594081 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
SMG9-202ENST00000594081 POTECB2RU33 542 aa11.72□□□□□ -0.53
SMG9-202ENST00000594081 NFIXQ14938 502 aa11.72□□□□□ -0.53
SMG9-202ENST00000594081 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
SMG9-202ENST00000594081 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
SMG9-202ENST00000594081 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
SMG9-202ENST00000594081 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
SMG9-202ENST00000594081 AEBP1Q8IUX7 1158 aa11.71□□□□□ -0.53
SMG9-202ENST00000594081 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
SMG9-202ENST00000594081 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
SMG9-202ENST00000594081 ARFGEF2Q9Y6D5 1785 aa11.71□□□□□ -0.54
SMG9-202ENST00000594081 FOXN1O15353 648 aa11.7□□□□□ -0.54
SMG9-202ENST00000594081 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
SMG9-202ENST00000594081 CNTNAP1P78357 1384 aa11.69□□□□□ -0.54
SMG9-202ENST00000594081 SLC34A2O95436 690 aa11.69□□□□□ -0.54
SMG9-202ENST00000594081 SERPINB2P05120 415 aa11.69□□□□□ -0.54
SMG9-202ENST00000594081 DPY19L2Q6NUT2 758 aa11.69□□□□□ -0.54
SMG9-202ENST00000594081 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
SMG9-202ENST00000594081 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
SMG9-202ENST00000594081 H0YIN7 160 aa11.68□□□□□ -0.54
SMG9-202ENST00000594081 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
SMG9-202ENST00000594081 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
SMG9-202ENST00000594081 CYP19A1P11511 503 aaPredicted RBP11.68□□□□□ -0.54
SMG9-202ENST00000594081 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
SMG9-202ENST00000594081 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
SMG9-202ENST00000594081 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
SMG9-202ENST00000594081 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
SMG9-202ENST00000594081 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
SMG9-202ENST00000594081 SCN4AP35499 1836 aa11.67□□□□□ -0.54
SMG9-202ENST00000594081 BCORQ6W2J9 1755 aa11.67□□□□□ -0.54
SMG9-202ENST00000594081 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
SMG9-202ENST00000594081 ADAMTSL1Q8N6G6 1762 aa11.66□□□□□ -0.54
SMG9-202ENST00000594081 SLX4Q8IY92 1834 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 PASKQ96RG2 1323 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 C21orf2O43822 256 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 SLC39A6Q13433 755 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 ZNF622Q969S3 477 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMG9-202ENST00000594081 AIDAQ96BJ3 306 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 TAOK3Q9H2K8 898 aa11.65□□□□□ -0.54
SMG9-202ENST00000594081 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
SMG9-202ENST00000594081 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
SMG9-202ENST00000594081 DDNO94850 711 aaPredicted RBP11.64□□□□□ -0.55
SMG9-202ENST00000594081 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
SMG9-202ENST00000594081 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
SMG9-202ENST00000594081 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
SMG9-202ENST00000594081 PDE6BP35913 854 aa11.63□□□□□ -0.55
SMG9-202ENST00000594081 LDHDQ86WU2 507 aa11.63□□□□□ -0.55
SMG9-202ENST00000594081 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
SMG9-202ENST00000594081 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
SMG9-202ENST00000594081 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
SMG9-202ENST00000594081 VEGFBP49765 207 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 PRR5LQ6MZQ0 368 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 BRIP1Q9BX63 1249 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
SMG9-202ENST00000594081 SIPA1L3O60292 1781 aaPredicted RBP11.62□□□□□ -0.55
SMG9-202ENST00000594081 TMEM88BA6NKF7 163 aa11.61□□□□□ -0.55
SMG9-202ENST00000594081 IL13P35225 146 aa11.61□□□□□ -0.55
SMG9-202ENST00000594081 LBX1P52954 281 aa11.61□□□□□ -0.55
SMG9-202ENST00000594081 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
SMG9-202ENST00000594081 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
SMG9-202ENST00000594081 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
SMG9-202ENST00000594081 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
SMG9-202ENST00000594081 A0A087WZG4 1122 aa11.6□□□□□ -0.55
SMG9-202ENST00000594081 EIF5P55010 431 aaKnown RBP11.6□□□□□ -0.55
SMG9-202ENST00000594081 ABHD8Q96I13 439 aa11.6□□□□□ -0.55
SMG9-202ENST00000594081 TAF1DQ9H5J8 278 aaPredicted RBP11.6□□□□□ -0.55
SMG9-202ENST00000594081 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
SMG9-202ENST00000594081 HSPA8P11142 646 aaKnown RBP11.59□□□□□ -0.55
SMG9-202ENST00000594081 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
SMG9-202ENST00000594081 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
SMG9-202ENST00000594081 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
SMG9-202ENST00000594081 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
SMG9-202ENST00000594081 CNBD1Q8NA66 436 aa11.59□□□□□ -0.55
SMG9-202ENST00000594081 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
SMG9-202ENST00000594081 ZNF330Q9Y3S2 320 aaPredicted RBP11.59□□□□□ -0.55
SMG9-202ENST00000594081 ZNF541Q9H0D2 1346 aa11.59□□□□□ -0.55
SMG9-202ENST00000594081 STARD3NLO95772 234 aa11.58□□□□□ -0.56
SMG9-202ENST00000594081 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
SMG9-202ENST00000594081 SRGNP10124 158 aa11.58□□□□□ -0.56
SMG9-202ENST00000594081 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms