RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.27
VRK3-205ENST00000593919 BCL9O00512 1426 aa16.76■□□□□ 0.27
VRK3-205ENST00000593919 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
VRK3-205ENST00000593919 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
VRK3-205ENST00000593919 A0A0G2JS52 829 aa16.75■□□□□ 0.27
VRK3-205ENST00000593919 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
VRK3-205ENST00000593919 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
VRK3-205ENST00000593919 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
VRK3-205ENST00000593919 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
VRK3-205ENST00000593919 MSH5O43196 834 aa16.74■□□□□ 0.27
VRK3-205ENST00000593919 ANXA1P04083 346 aa16.74■□□□□ 0.27
VRK3-205ENST00000593919 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
VRK3-205ENST00000593919 AAMPQ13685 434 aa16.74■□□□□ 0.27
VRK3-205ENST00000593919 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
VRK3-205ENST00000593919 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
VRK3-205ENST00000593919 ASAP1Q9ULH1 1129 aa16.73■□□□□ 0.27
VRK3-205ENST00000593919 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
VRK3-205ENST00000593919 F6X3S4 739 aa16.73■□□□□ 0.27
VRK3-205ENST00000593919 PRIM1P49642 420 aaKnown RBP16.73■□□□□ 0.27
VRK3-205ENST00000593919 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
VRK3-205ENST00000593919 EP400Q96L91 3159 aa16.72■□□□□ 0.27
VRK3-205ENST00000593919 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
VRK3-205ENST00000593919 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
VRK3-205ENST00000593919 ATG3Q9NT62 314 aa16.71■□□□□ 0.27
VRK3-205ENST00000593919 PDIA6Q15084 440 aa16.71■□□□□ 0.27
VRK3-205ENST00000593919 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
VRK3-205ENST00000593919 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
VRK3-205ENST00000593919 ZBTB40Q9NUA8 1239 aa16.7■□□□□ 0.26
VRK3-205ENST00000593919 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
VRK3-205ENST00000593919 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
VRK3-205ENST00000593919 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
VRK3-205ENST00000593919 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
VRK3-205ENST00000593919 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
VRK3-205ENST00000593919 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
VRK3-205ENST00000593919 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
VRK3-205ENST00000593919 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
VRK3-205ENST00000593919 KDM2BQ8NHM5 1336 aa16.68■□□□□ 0.26
VRK3-205ENST00000593919 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
VRK3-205ENST00000593919 MYL6BP14649 208 aa16.68■□□□□ 0.26
VRK3-205ENST00000593919 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
VRK3-205ENST00000593919 SBF2Q86WG5 1849 aa16.67■□□□□ 0.26
VRK3-205ENST00000593919 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
VRK3-205ENST00000593919 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
VRK3-205ENST00000593919 CHMP4BQ9H444 224 aaKnown RBP16.67■□□□□ 0.26
VRK3-205ENST00000593919 ADCY9O60503 1353 aa16.67■□□□□ 0.26
VRK3-205ENST00000593919 TJP1Q07157 1748 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 PI4KAP2A4QPH2 592 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
VRK3-205ENST00000593919 LRP10Q7Z4F1 713 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 PI4KAP1Q8N8J0 262 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 KCNQ2O43526 872 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
VRK3-205ENST00000593919 IGHDP01880 384 aa16.65■□□□□ 0.26
VRK3-205ENST00000593919 FBXO41Q8TF61 875 aa16.65■□□□□ 0.26
VRK3-205ENST00000593919 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
VRK3-205ENST00000593919 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
VRK3-205ENST00000593919 ERBB4Q15303 1308 aa16.65■□□□□ 0.26
VRK3-205ENST00000593919 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
VRK3-205ENST00000593919 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 BTAF1O14981 1849 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 NBPF14Q5TI25 921 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
VRK3-205ENST00000593919 DNAJC10Q8IXB1 793 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
VRK3-205ENST00000593919 ARFGEF2Q9Y6D5 1785 aa16.63■□□□□ 0.25
VRK3-205ENST00000593919 A1BGP04217 495 aa16.63■□□□□ 0.25
VRK3-205ENST00000593919 ERICH6Q7L0X2 663 aa16.63■□□□□ 0.25
VRK3-205ENST00000593919 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
VRK3-205ENST00000593919 XAGE3Q8WTP9 111 aa16.63■□□□□ 0.25
VRK3-205ENST00000593919 MEIS3Q99687 375 aa16.63■□□□□ 0.25
VRK3-205ENST00000593919 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
VRK3-205ENST00000593919 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
VRK3-205ENST00000593919 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
VRK3-205ENST00000593919 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
VRK3-205ENST00000593919 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
VRK3-205ENST00000593919 CICQ96RK0 1608 aaPredicted RBP16.62■□□□□ 0.25
VRK3-205ENST00000593919 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
VRK3-205ENST00000593919 DDX58O95786 925 aaKnown RBP16.62■□□□□ 0.25
VRK3-205ENST00000593919 PDE4AP27815 886 aa16.62■□□□□ 0.25
VRK3-205ENST00000593919 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
VRK3-205ENST00000593919 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
VRK3-205ENST00000593919 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
VRK3-205ENST00000593919 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
VRK3-205ENST00000593919 NUP188Q5SRE5 1749 aa16.61■□□□□ 0.25
VRK3-205ENST00000593919 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
VRK3-205ENST00000593919 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
VRK3-205ENST00000593919 STARD3NLO95772 234 aa16.6■□□□□ 0.25
VRK3-205ENST00000593919 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
VRK3-205ENST00000593919 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
VRK3-205ENST00000593919 AFDNP55196 1824 aaKnown RBP16.6■□□□□ 0.25
VRK3-205ENST00000593919 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
VRK3-205ENST00000593919 SIK1P57059 783 aa16.59■□□□□ 0.25
VRK3-205ENST00000593919 HDAC1Q13547 482 aaPredicted RBP16.59■□□□□ 0.25
VRK3-205ENST00000593919 RIC3Q7Z5B4 369 aa16.59■□□□□ 0.25
VRK3-205ENST00000593919 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms