RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC39A6Q13433 755 aa19.94■□□□□ 0.78
PNKP-202ENST00000593706 SOS1Q07889 1333 aaPredicted RBP19.94■□□□□ 0.78
PNKP-202ENST00000593706 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
PNKP-202ENST00000593706 CC2D1BQ5T0F9 858 aaKnown RBP19.93■□□□□ 0.78
PNKP-202ENST00000593706 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
PNKP-202ENST00000593706 POLRMTO00411 1230 aaKnown RBP19.92■□□□□ 0.78
PNKP-202ENST00000593706 TOMM70O94826 608 aa19.92■□□□□ 0.78
PNKP-202ENST00000593706 CHRNA5P30532 468 aa19.92■□□□□ 0.78
PNKP-202ENST00000593706 C9orf131Q5VYM1 1079 aa19.92■□□□□ 0.78
PNKP-202ENST00000593706 ANKRD31Q8N7Z5 1873 aa19.92■□□□□ 0.78
PNKP-202ENST00000593706 CYP19A1P11511 503 aaPredicted RBP19.91■□□□□ 0.78
PNKP-202ENST00000593706 MTHFSDQ2M296 383 aaKnown RBP19.91■□□□□ 0.78
PNKP-202ENST00000593706 NMRK2Q9NPI5 230 aa19.91■□□□□ 0.78
PNKP-202ENST00000593706 COL3A1P02461 1466 aaPredicted RBP19.91■□□□□ 0.78
PNKP-202ENST00000593706 RNF181Q9P0P0 153 aa19.9■□□□□ 0.78
PNKP-202ENST00000593706 ZBTB1Q9Y2K1 713 aa19.9■□□□□ 0.78
PNKP-202ENST00000593706 PCNTO95613 3336 aa19.9■□□□□ 0.78
PNKP-202ENST00000593706 COL11A2P13942 1736 aaPredicted RBP19.89■□□□□ 0.77
PNKP-202ENST00000593706 TM4SF1P30408 202 aa19.89■□□□□ 0.77
PNKP-202ENST00000593706 APLP1P51693 650 aa19.89■□□□□ 0.77
PNKP-202ENST00000593706 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
PNKP-202ENST00000593706 BCORQ6W2J9 1755 aa19.89■□□□□ 0.77
PNKP-202ENST00000593706 C16orf71Q8IYS4 520 aaPredicted RBP19.89■□□□□ 0.77
PNKP-202ENST00000593706 TTC5Q8N0Z6 440 aa19.89■□□□□ 0.77
PNKP-202ENST00000593706 DICER1Q9UPY3 1922 aaKnown RBP19.89■□□□□ 0.77
PNKP-202ENST00000593706 KDM2BQ8NHM5 1336 aa19.88■□□□□ 0.77
PNKP-202ENST00000593706 IFFO2Q5TF58 517 aa19.88■□□□□ 0.77
PNKP-202ENST00000593706 NARFQ9UHQ1 456 aa19.88■□□□□ 0.77
PNKP-202ENST00000593706 VSIG10Q8N0Z9 540 aa19.87■□□□□ 0.77
PNKP-202ENST00000593706 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
PNKP-202ENST00000593706 PER1O15534 1290 aaPredicted RBP19.86■□□□□ 0.77
PNKP-202ENST00000593706 NFIXQ14938 502 aa19.86■□□□□ 0.77
PNKP-202ENST00000593706 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
PNKP-202ENST00000593706 FER1L6Q2WGJ9 1857 aa19.85■□□□□ 0.77
PNKP-202ENST00000593706 ARFGEF2Q9Y6D5 1785 aa19.85■□□□□ 0.77
PNKP-202ENST00000593706 STARD3NLO95772 234 aa19.84■□□□□ 0.77
PNKP-202ENST00000593706 TEFQ10587 303 aa19.84■□□□□ 0.77
PNKP-202ENST00000593706 RBM46Q8TBY0 533 aaKnown RBP19.84■□□□□ 0.77
PNKP-202ENST00000593706 CARMIL3Q8ND23 1372 aa19.83■□□□□ 0.76
PNKP-202ENST00000593706 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.76
PNKP-202ENST00000593706 GNAT3A8MTJ3 354 aa19.82■□□□□ 0.76
PNKP-202ENST00000593706 SERPINB2P05120 415 aa19.82■□□□□ 0.76
PNKP-202ENST00000593706 RASSF7Q02833 373 aa19.82■□□□□ 0.76
PNKP-202ENST00000593706 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
PNKP-202ENST00000593706 BCL2L12Q9HB09 334 aa19.82■□□□□ 0.76
PNKP-202ENST00000593706 ZNF330Q9Y3S2 320 aaPredicted RBP19.82■□□□□ 0.76
PNKP-202ENST00000593706 BICDL1Q6ZP65 573 aa19.81■□□□□ 0.76
PNKP-202ENST00000593706 HEG1Q9ULI3 1381 aa19.81■□□□□ 0.76
PNKP-202ENST00000593706 A0A087WZG4 1122 aa19.8■□□□□ 0.76
PNKP-202ENST00000593706 C2CD5Q86YS7 1000 aa19.8■□□□□ 0.76
PNKP-202ENST00000593706 ZC3H4Q9UPT8 1303 aaKnown RBP19.79■□□□□ 0.76
PNKP-202ENST00000593706 DLG5Q8TDM6 1919 aa19.79■□□□□ 0.76
PNKP-202ENST00000593706 ZNF790Q6PG37 636 aa19.79■□□□□ 0.76
PNKP-202ENST00000593706 TTLL6Q8N841 843 aa19.79■□□□□ 0.76
PNKP-202ENST00000593706 ZNF496Q96IT1 587 aaPredicted RBP19.79■□□□□ 0.76
PNKP-202ENST00000593706 RRAGCQ9HB90 399 aa19.79■□□□□ 0.76
PNKP-202ENST00000593706 H0YIN7 160 aa19.78■□□□□ 0.76
PNKP-202ENST00000593706 LMNB1P20700 586 aa19.78■□□□□ 0.76
PNKP-202ENST00000593706 EIF5P55010 431 aaKnown RBP19.78■□□□□ 0.76
PNKP-202ENST00000593706 FSTL1Q12841 308 aa19.78■□□□□ 0.76
PNKP-202ENST00000593706 NPM2Q86SE8 214 aaKnown RBP19.78■□□□□ 0.76
PNKP-202ENST00000593706 TEX13AQ9BXU3 409 aaPredicted RBP19.78■□□□□ 0.76
PNKP-202ENST00000593706 LAMB4A4D0S4 1761 aa19.78■□□□□ 0.76
PNKP-202ENST00000593706 IL17REQ8NFR9 667 aa19.77■□□□□ 0.76
PNKP-202ENST00000593706 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
PNKP-202ENST00000593706 CFAP53Q96M91 514 aa19.76■□□□□ 0.75
PNKP-202ENST00000593706 FMNL2Q96PY5 1086 aa19.76■□□□□ 0.75
PNKP-202ENST00000593706 NPHP1O15259 732 aa19.75■□□□□ 0.75
PNKP-202ENST00000593706 TBC1D9BQ66K14 1250 aa19.75■□□□□ 0.75
PNKP-202ENST00000593706 CEMIPQ8WUJ3 1361 aa19.74■□□□□ 0.75
PNKP-202ENST00000593706 PRKAR2BP31323 418 aa19.74■□□□□ 0.75
PNKP-202ENST00000593706 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
PNKP-202ENST00000593706 DNAJC5GQ8N7S2 189 aa19.74■□□□□ 0.75
PNKP-202ENST00000593706 TBC1D2BQ9UPU7 963 aa19.74■□□□□ 0.75
PNKP-202ENST00000593706 PDE6BP35913 854 aa19.73■□□□□ 0.75
PNKP-202ENST00000593706 HTRA3P83110 453 aa19.73■□□□□ 0.75
PNKP-202ENST00000593706 ZNF622Q969S3 477 aaKnown RBP eCLIP19.73■□□□□ 0.75
PNKP-202ENST00000593706 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
PNKP-202ENST00000593706 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
PNKP-202ENST00000593706 PDZRN3Q9UPQ7 1066 aa19.72■□□□□ 0.75
PNKP-202ENST00000593706 GLTPD2A6NH11 291 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 NFKBIEO00221 500 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 A1BGP04217 495 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 PRELPP51888 382 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 PRR5LQ6MZQ0 368 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 CCDC24Q8N4L8 307 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 CNBD1Q8NA66 436 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
PNKP-202ENST00000593706 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
PNKP-202ENST00000593706 KLRG1Q96E93 195 aa19.7■□□□□ 0.74
PNKP-202ENST00000593706 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
PNKP-202ENST00000593706 SETDB2Q96T68 719 aa19.7■□□□□ 0.74
PNKP-202ENST00000593706 BRIP1Q9BX63 1249 aa19.7■□□□□ 0.74
PNKP-202ENST00000593706 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
PNKP-202ENST00000593706 VEGFAP15692 232 aaPredicted RBP19.69■□□□□ 0.74
PNKP-202ENST00000593706 ST5P78524 1137 aa19.69■□□□□ 0.74
PNKP-202ENST00000593706 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
PNKP-202ENST00000593706 KDM3BQ7LBC6 1761 aa19.69■□□□□ 0.74
PNKP-202ENST00000593706 NUP98P52948 1817 aa19.69■□□□□ 0.74
PNKP-202ENST00000593706 C21orf2O43822 256 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms