RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 TRIM27P14373 513 aa14.74□□□□□ -0.05
CACNA1A-213ENST00000593267 FAM196AQ6ZSG2 479 aa14.74□□□□□ -0.05
CACNA1A-213ENST00000593267 PRAMEF22A3QJZ6 481 aa14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 MS4A1P11836 297 aa14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 EZH2Q15910 746 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 CRBNQ96SW2 442 aa14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 STK31Q9BXU1 1019 aa14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 TNNQ9UQP3 1299 aa14.73□□□□□ -0.05
CACNA1A-213ENST00000593267 PTPRCP08575 1304 aa14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 BTAF1O14981 1849 aa14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 RLBP1P12271 317 aa14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 PRIM1P49642 420 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 DZIP1LQ8IYY4 767 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 EXOC6Q8TAG9 804 aa14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 ATG3Q9NT62 314 aa14.72□□□□□ -0.05
CACNA1A-213ENST00000593267 ABCC4O15439 1325 aa14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 APBA3O96018 575 aa14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 PANK1Q8TE04 598 aa14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 NECTIN2Q92692 538 aa14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 API5Q9BZZ5 524 aaKnown RBP14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 ASAP1Q9ULH1 1129 aa14.71□□□□□ -0.05
CACNA1A-213ENST00000593267 VSIG10Q8N0Z9 540 aa14.7□□□□□ -0.06
CACNA1A-213ENST00000593267 SYTL4Q96C24 671 aaPredicted RBP14.7□□□□□ -0.06
CACNA1A-213ENST00000593267 ACSBG1Q96GR2 724 aa14.7□□□□□ -0.06
CACNA1A-213ENST00000593267 CHPF2Q9P2E5 772 aa14.7□□□□□ -0.06
CACNA1A-213ENST00000593267 DBF4Q9UBU7 674 aaPredicted RBP14.7□□□□□ -0.06
CACNA1A-213ENST00000593267 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 RREB1Q92766 1687 aa14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 FLIIQ13045 1269 aa14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 G2E3Q7L622 706 aa14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 FTSJ3Q8IY81 847 aaKnown RBP14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 CLUAP1Q96AJ1 413 aa14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 CAMKK2Q96RR4 588 aa14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
CACNA1A-213ENST00000593267 ERBB4Q15303 1308 aa14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 MVPQ14764 893 aaKnown RBP14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 DDX21Q9NR30 783 aaKnown RBP eCLIP14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 PPP4R2Q9NY27 417 aa14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 COG6Q9Y2V7 657 aa14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 LY75O60449 1722 aa14.68□□□□□ -0.06
CACNA1A-213ENST00000593267 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
CACNA1A-213ENST00000593267 KCNQ2O43526 872 aa14.67□□□□□ -0.06
CACNA1A-213ENST00000593267 PDIA6Q15084 440 aa14.67□□□□□ -0.06
CACNA1A-213ENST00000593267 PALLDQ8WX93 1383 aa14.66□□□□□ -0.06
CACNA1A-213ENST00000593267 PROSER3Q2NL68 480 aa14.66□□□□□ -0.06
CACNA1A-213ENST00000593267 TMEM57Q8N5G2 664 aa14.66□□□□□ -0.06
CACNA1A-213ENST00000593267 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
CACNA1A-213ENST00000593267 PHAXQ9H814 394 aaKnown RBP14.66□□□□□ -0.06
CACNA1A-213ENST00000593267 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
CACNA1A-213ENST00000593267 AAMPQ13685 434 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 NBPF14Q5TI25 921 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 SLC4A9Q96Q91 983 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 NUP188Q5SRE5 1749 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
CACNA1A-213ENST00000593267 ANXA1P04083 346 aa14.64□□□□□ -0.07
CACNA1A-213ENST00000593267 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-213ENST00000593267 INTS3Q68E01 1043 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-213ENST00000593267 ITPRIPQ8IWB1 547 aa14.64□□□□□ -0.07
CACNA1A-213ENST00000593267 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-213ENST00000593267 ADCY9O60503 1353 aa14.63□□□□□ -0.07
CACNA1A-213ENST00000593267 DNAJC10Q8IXB1 793 aa14.63□□□□□ -0.07
CACNA1A-213ENST00000593267 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
CACNA1A-213ENST00000593267 NBPF10Q6P3W6 841 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-213ENST00000593267 PTF1AQ7RTS3 328 aa14.62□□□□□ -0.07
CACNA1A-213ENST00000593267 NBPF15Q8N660 670 aa14.62□□□□□ -0.07
CACNA1A-213ENST00000593267 ATP10DQ9P241 1426 aa14.62□□□□□ -0.07
CACNA1A-213ENST00000593267 TAF1LQ8IZX4 1826 aa14.62□□□□□ -0.07
CACNA1A-213ENST00000593267 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
CACNA1A-213ENST00000593267 F6X3S4 739 aa14.61□□□□□ -0.07
CACNA1A-213ENST00000593267 CYP19A1P11511 503 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-213ENST00000593267 SIK1P57059 783 aa14.61□□□□□ -0.07
CACNA1A-213ENST00000593267 STARD3NLO95772 234 aa14.6□□□□□ -0.07
CACNA1A-213ENST00000593267 MYL6BP14649 208 aa14.6□□□□□ -0.07
CACNA1A-213ENST00000593267 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-213ENST00000593267 BCL11BQ9C0K0 894 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-213ENST00000593267 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-213ENST00000593267 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-213ENST00000593267 ZBTB7BO15156 539 aaPredicted RBP14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 DDX58O95786 925 aaKnown RBP14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 A1BGP04217 495 aa14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 KSR2Q6VAB6 950 aa14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 XAGE3Q8WTP9 111 aa14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 DNAAF4Q8WXU2 420 aa14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
CACNA1A-213ENST00000593267 MYH14Q7Z406 1995 aaKnown RBP14.58□□□□□ -0.07
CACNA1A-213ENST00000593267 AFDNP55196 1824 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-213ENST00000593267 PI4KAP2A4QPH2 592 aa14.58□□□□□ -0.08
CACNA1A-213ENST00000593267 ATP6V1AP38606 617 aa14.58□□□□□ -0.08
CACNA1A-213ENST00000593267 ITPK1Q13572 414 aa14.58□□□□□ -0.08
CACNA1A-213ENST00000593267 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.08
CACNA1A-213ENST00000593267 COPS6Q7L5N1 327 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms