RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 DALRD3Q5D0E6 543 aaKnown RBP23.71■■□□□ 1.39
RETREG3-212ENST00000593251 DIAPH1O60610 1272 aaKnown RBP23.69■■□□□ 1.38
RETREG3-212ENST00000593251 CNGB1Q14028 1251 aaPredicted RBP23.69■■□□□ 1.38
RETREG3-212ENST00000593251 ZBTB1Q9Y2K1 713 aa23.69■■□□□ 1.38
RETREG3-212ENST00000593251 COL15A1P39059 1388 aa23.68■■□□□ 1.38
RETREG3-212ENST00000593251 NRXN2Q9P2S2 1712 aa23.68■■□□□ 1.38
RETREG3-212ENST00000593251 PER1O15534 1290 aaPredicted RBP23.68■■□□□ 1.38
RETREG3-212ENST00000593251 TOMM70O94826 608 aa23.68■■□□□ 1.38
RETREG3-212ENST00000593251 IFFO2Q5TF58 517 aa23.68■■□□□ 1.38
RETREG3-212ENST00000593251 DLEC1Q9Y238 1755 aa23.68■■□□□ 1.38
RETREG3-212ENST00000593251 RNF181Q9P0P0 153 aa23.66■■□□□ 1.38
RETREG3-212ENST00000593251 NARFQ9UHQ1 456 aa23.66■■□□□ 1.38
RETREG3-212ENST00000593251 CCDC88AQ3V6T2 1871 aa23.66■■□□□ 1.38
RETREG3-212ENST00000593251 NFIXQ14938 502 aa23.65■■□□□ 1.38
RETREG3-212ENST00000593251 SIPA1L3O60292 1781 aaPredicted RBP23.65■■□□□ 1.38
RETREG3-212ENST00000593251 APLP1P51693 650 aa23.64■■□□□ 1.37
RETREG3-212ENST00000593251 BCL2L12Q9HB09 334 aa23.64■■□□□ 1.37
RETREG3-212ENST00000593251 WDR90Q96KV7 1748 aa23.64■■□□□ 1.37
RETREG3-212ENST00000593251 COL3A1P02461 1466 aaPredicted RBP23.63■■□□□ 1.37
RETREG3-212ENST00000593251 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
RETREG3-212ENST00000593251 TNRC6CQ9HCJ0 1690 aaKnown RBP23.62■■□□□ 1.37
RETREG3-212ENST00000593251 U2SURPO15042 1029 aaKnown RBP23.61■■□□□ 1.37
RETREG3-212ENST00000593251 SERPINB2P05120 415 aa23.61■■□□□ 1.37
RETREG3-212ENST00000593251 VSIG10Q8N0Z9 540 aa23.61■■□□□ 1.37
RETREG3-212ENST00000593251 RASSF7Q02833 373 aa23.6■■□□□ 1.37
RETREG3-212ENST00000593251 TTC5Q8N0Z6 440 aa23.6■■□□□ 1.37
RETREG3-212ENST00000593251 ANKRD31Q8N7Z5 1873 aa23.6■■□□□ 1.37
RETREG3-212ENST00000593251 BICDL1Q6ZP65 573 aa23.59■■□□□ 1.37
RETREG3-212ENST00000593251 C16orf71Q8IYS4 520 aaPredicted RBP23.59■■□□□ 1.37
RETREG3-212ENST00000593251 CARMIL3Q8ND23 1372 aa23.59■■□□□ 1.37
RETREG3-212ENST00000593251 KDM2BQ8NHM5 1336 aa23.59■■□□□ 1.37
RETREG3-212ENST00000593251 SCN7AQ01118 1682 aa23.58■■□□□ 1.37
RETREG3-212ENST00000593251 RBM46Q8TBY0 533 aaKnown RBP23.58■■□□□ 1.37
RETREG3-212ENST00000593251 RRAGCQ9HB90 399 aa23.58■■□□□ 1.37
RETREG3-212ENST00000593251 TIAM2Q8IVF5 1701 aa23.57■■□□□ 1.36
RETREG3-212ENST00000593251 DNAJC5GQ8N7S2 189 aa23.57■■□□□ 1.36
RETREG3-212ENST00000593251 IL17REQ8NFR9 667 aa23.57■■□□□ 1.36
RETREG3-212ENST00000593251 ZNF496Q96IT1 587 aaPredicted RBP23.57■■□□□ 1.36
RETREG3-212ENST00000593251 STARD3NLO95772 234 aa23.56■■□□□ 1.36
RETREG3-212ENST00000593251 EIF5P55010 431 aaKnown RBP23.56■■□□□ 1.36
RETREG3-212ENST00000593251 TEFQ10587 303 aa23.56■■□□□ 1.36
RETREG3-212ENST00000593251 C2CD5Q86YS7 1000 aa23.56■■□□□ 1.36
RETREG3-212ENST00000593251 GNAT3A8MTJ3 354 aa23.55■■□□□ 1.36
RETREG3-212ENST00000593251 HTRA3P83110 453 aa23.55■■□□□ 1.36
RETREG3-212ENST00000593251 ZNF330Q9Y3S2 320 aaPredicted RBP23.55■■□□□ 1.36
RETREG3-212ENST00000593251 CACNA1SQ13698 1873 aa23.55■■□□□ 1.36
RETREG3-212ENST00000593251 HEG1Q9ULI3 1381 aa23.54■■□□□ 1.36
RETREG3-212ENST00000593251 COL11A2P13942 1736 aaPredicted RBP23.54■■□□□ 1.36
RETREG3-212ENST00000593251 PRELPP51888 382 aa23.54■■□□□ 1.36
RETREG3-212ENST00000593251 ZNF790Q6PG37 636 aa23.54■■□□□ 1.36
RETREG3-212ENST00000593251 GAS2L2Q8NHY3 880 aa23.54■■□□□ 1.36
RETREG3-212ENST00000593251 NPC1L1Q9UHC9 1359 aa23.53■■□□□ 1.36
RETREG3-212ENST00000593251 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
RETREG3-212ENST00000593251 TTLL6Q8N841 843 aa23.53■■□□□ 1.36
RETREG3-212ENST00000593251 A0A087WZG4 1122 aa23.52■■□□□ 1.36
RETREG3-212ENST00000593251 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
RETREG3-212ENST00000593251 H0YIN7 160 aa23.51■■□□□ 1.35
RETREG3-212ENST00000593251 LMNB1P20700 586 aa23.51■■□□□ 1.35
RETREG3-212ENST00000593251 CCDC24Q8N4L8 307 aa23.51■■□□□ 1.35
RETREG3-212ENST00000593251 BCORQ6W2J9 1755 aa23.5■■□□□ 1.35
RETREG3-212ENST00000593251 FSTL1Q12841 308 aa23.5■■□□□ 1.35
RETREG3-212ENST00000593251 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
RETREG3-212ENST00000593251 KCNQ3O43525 872 aa23.49■■□□□ 1.35
RETREG3-212ENST00000593251 A1BGP04217 495 aa23.49■■□□□ 1.35
RETREG3-212ENST00000593251 PHACTR3Q96KR7 559 aa23.49■■□□□ 1.35
RETREG3-212ENST00000593251 TEX13AQ9BXU3 409 aaPredicted RBP23.49■■□□□ 1.35
RETREG3-212ENST00000593251 FER1L6Q2WGJ9 1857 aa23.48■■□□□ 1.35
RETREG3-212ENST00000593251 FMNL2Q96PY5 1086 aa23.48■■□□□ 1.35
RETREG3-212ENST00000593251 ZNF219Q9P2Y4 722 aaPredicted RBP23.48■■□□□ 1.35
RETREG3-212ENST00000593251 NFKBIEO00221 500 aa23.47■■□□□ 1.35
RETREG3-212ENST00000593251 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
RETREG3-212ENST00000593251 IL6STP40189 918 aaPredicted RBP23.47■■□□□ 1.35
RETREG3-212ENST00000593251 PRR5LQ6MZQ0 368 aa23.47■■□□□ 1.35
RETREG3-212ENST00000593251 ZNF622Q969S3 477 aaKnown RBP eCLIP23.47■■□□□ 1.35
RETREG3-212ENST00000593251 ZC3H4Q9UPT8 1303 aaKnown RBP23.47■■□□□ 1.35
RETREG3-212ENST00000593251 CEMIPQ8WUJ3 1361 aa23.47■■□□□ 1.35
RETREG3-212ENST00000593251 GLTPD2A6NH11 291 aa23.45■■□□□ 1.34
RETREG3-212ENST00000593251 BTBD11A6QL63 1104 aa23.45■■□□□ 1.34
RETREG3-212ENST00000593251 RSPH6AQ9H0K4 717 aa23.45■■□□□ 1.34
RETREG3-212ENST00000593251 SLX4Q8IY92 1834 aa23.45■■□□□ 1.34
RETREG3-212ENST00000593251 C21orf2O43822 256 aa23.44■■□□□ 1.34
RETREG3-212ENST00000593251 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
RETREG3-212ENST00000593251 SMC1BQ8NDV3 1235 aa23.44■■□□□ 1.34
RETREG3-212ENST00000593251 KLRG1Q96E93 195 aa23.44■■□□□ 1.34
RETREG3-212ENST00000593251 BRIP1Q9BX63 1249 aa23.44■■□□□ 1.34
RETREG3-212ENST00000593251 CAMTA2O94983 1202 aa23.43■■□□□ 1.34
RETREG3-212ENST00000593251 PDE6BP35913 854 aa23.43■■□□□ 1.34
RETREG3-212ENST00000593251 NPM2Q86SE8 214 aaKnown RBP23.43■■□□□ 1.34
RETREG3-212ENST00000593251 CFAP53Q96M91 514 aa23.43■■□□□ 1.34
RETREG3-212ENST00000593251 ARFGEF2Q9Y6D5 1785 aa23.42■■□□□ 1.34
RETREG3-212ENST00000593251 PRAMEF22A3QJZ6 481 aa23.42■■□□□ 1.34
RETREG3-212ENST00000593251 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
RETREG3-212ENST00000593251 NPHP1O15259 732 aa23.41■■□□□ 1.34
RETREG3-212ENST00000593251 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
RETREG3-212ENST00000593251 SETDB2Q96T68 719 aa23.41■■□□□ 1.34
RETREG3-212ENST00000593251 MCM10Q7L590 875 aa23.4■■□□□ 1.34
RETREG3-212ENST00000593251 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
RETREG3-212ENST00000593251 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
RETREG3-212ENST00000593251 PDZRN3Q9UPQ7 1066 aa23.39■■□□□ 1.33
RETREG3-212ENST00000593251 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms