RNA–Protein interactions for RNA: ENST00000593205.5

BECN1-220, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-220ENST00000593205 N4BP2Q86UW6 1770 aaPredicted RBP20.62■□□□□ 0.89
BECN1-220ENST00000593205 COL15A1P39059 1388 aa20.62■□□□□ 0.89
BECN1-220ENST00000593205 BTBD11A6QL63 1104 aa20.62■□□□□ 0.89
BECN1-220ENST00000593205 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
BECN1-220ENST00000593205 GRIN3BO60391 1043 aa20.61■□□□□ 0.89
BECN1-220ENST00000593205 CANXP27824 592 aaKnown RBP20.61■□□□□ 0.89
BECN1-220ENST00000593205 TM4SF1P30408 202 aa20.61■□□□□ 0.89
BECN1-220ENST00000593205 BCL2L12Q9HB09 334 aa20.61■□□□□ 0.89
BECN1-220ENST00000593205 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
BECN1-220ENST00000593205 DLG5Q8TDM6 1919 aa20.61■□□□□ 0.89
BECN1-220ENST00000593205 RALBP1Q15311 655 aa20.6■□□□□ 0.89
BECN1-220ENST00000593205 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
BECN1-220ENST00000593205 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
BECN1-220ENST00000593205 PRAMEF22A3QJZ6 481 aa20.59■□□□□ 0.89
BECN1-220ENST00000593205 STARD3NLO95772 234 aa20.59■□□□□ 0.89
BECN1-220ENST00000593205 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
BECN1-220ENST00000593205 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
BECN1-220ENST00000593205 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
BECN1-220ENST00000593205 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.89
BECN1-220ENST00000593205 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.89
BECN1-220ENST00000593205 ZPR1O75312 459 aa20.58■□□□□ 0.89
BECN1-220ENST00000593205 TGFB2P61812 414 aa20.58■□□□□ 0.89
BECN1-220ENST00000593205 A1BGP04217 495 aa20.57■□□□□ 0.88
BECN1-220ENST00000593205 DPEP1P16444 411 aa20.57■□□□□ 0.88
BECN1-220ENST00000593205 KCNA3P22001 575 aa20.57■□□□□ 0.88
BECN1-220ENST00000593205 USP16Q9Y5T5 823 aa20.57■□□□□ 0.88
BECN1-220ENST00000593205 NFIXQ14938 502 aa20.56■□□□□ 0.88
BECN1-220ENST00000593205 TEX13AQ9BXU3 409 aaPredicted RBP20.56■□□□□ 0.88
BECN1-220ENST00000593205 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
BECN1-220ENST00000593205 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
BECN1-220ENST00000593205 AFDNP55196 1824 aaKnown RBP20.55■□□□□ 0.88
BECN1-220ENST00000593205 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
BECN1-220ENST00000593205 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
BECN1-220ENST00000593205 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
BECN1-220ENST00000593205 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
BECN1-220ENST00000593205 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
BECN1-220ENST00000593205 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
BECN1-220ENST00000593205 SCN7AQ01118 1682 aa20.52■□□□□ 0.88
BECN1-220ENST00000593205 IL6STP40189 918 aaPredicted RBP20.52■□□□□ 0.88
BECN1-220ENST00000593205 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
BECN1-220ENST00000593205 BCS1LQ9Y276 419 aa20.51■□□□□ 0.87
BECN1-220ENST00000593205 ZNF330Q9Y3S2 320 aaPredicted RBP20.51■□□□□ 0.87
BECN1-220ENST00000593205 KDM3BQ7LBC6 1761 aa20.51■□□□□ 0.87
BECN1-220ENST00000593205 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
BECN1-220ENST00000593205 CHRNA5P30532 468 aa20.5■□□□□ 0.87
BECN1-220ENST00000593205 ADCY9O60503 1353 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 A0A087WZG4 1122 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 SERPINB2P05120 415 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 NEFMP07197 916 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 TBC1D9BQ66K14 1250 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
BECN1-220ENST00000593205 CARMIL3Q8ND23 1372 aa20.48■□□□□ 0.87
BECN1-220ENST00000593205 NBPF26B4DH59 902 aa20.48■□□□□ 0.87
BECN1-220ENST00000593205 NBPF10Q6P3W6 841 aaKnown RBP20.48■□□□□ 0.87
BECN1-220ENST00000593205 NBPF15Q8N660 670 aa20.48■□□□□ 0.87
BECN1-220ENST00000593205 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
BECN1-220ENST00000593205 BCORQ6W2J9 1755 aa20.47■□□□□ 0.87
BECN1-220ENST00000593205 PNNQ9H307 717 aaKnown RBP20.47■□□□□ 0.87
BECN1-220ENST00000593205 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
BECN1-220ENST00000593205 ATP10DQ9P241 1426 aa20.46■□□□□ 0.87
BECN1-220ENST00000593205 EIF4A1P60842 406 aaKnown RBP20.45■□□□□ 0.86
BECN1-220ENST00000593205 CCDC146Q8IYE0 955 aa20.45■□□□□ 0.86
BECN1-220ENST00000593205 PIM2Q9P1W9 311 aa20.45■□□□□ 0.86
BECN1-220ENST00000593205 ARFGEF1Q9Y6D6 1849 aa20.45■□□□□ 0.86
BECN1-220ENST00000593205 LAMB4A4D0S4 1761 aa20.44■□□□□ 0.86
BECN1-220ENST00000593205 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
BECN1-220ENST00000593205 RIPK4P57078 832 aa20.44■□□□□ 0.86
BECN1-220ENST00000593205 DZIP3Q86Y13 1208 aaKnown RBP20.44■□□□□ 0.86
BECN1-220ENST00000593205 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
BECN1-220ENST00000593205 CCDC24Q8N4L8 307 aa20.43■□□□□ 0.86
BECN1-220ENST00000593205 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
BECN1-220ENST00000593205 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
BECN1-220ENST00000593205 ARHGAP27Q6ZUM4 889 aa20.42■□□□□ 0.86
BECN1-220ENST00000593205 PNISRQ8TF01 805 aaKnown RBP20.42■□□□□ 0.86
BECN1-220ENST00000593205 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
BECN1-220ENST00000593205 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
BECN1-220ENST00000593205 DALRD3Q5D0E6 543 aaKnown RBP20.41■□□□□ 0.86
BECN1-220ENST00000593205 PRR5LQ6MZQ0 368 aa20.41■□□□□ 0.86
BECN1-220ENST00000593205 NEUROD2Q15784 382 aa20.38■□□□□ 0.85
BECN1-220ENST00000593205 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
BECN1-220ENST00000593205 C2CD5Q86YS7 1000 aa20.38■□□□□ 0.85
BECN1-220ENST00000593205 ZNF526Q8TF50 670 aaPredicted RBP20.38■□□□□ 0.85
BECN1-220ENST00000593205 SETDB2Q96T68 719 aa20.38■□□□□ 0.85
BECN1-220ENST00000593205 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
BECN1-220ENST00000593205 COL11A2P13942 1736 aaPredicted RBP20.38■□□□□ 0.85
BECN1-220ENST00000593205 C1QTNF8P60827 252 aa20.37■□□□□ 0.85
BECN1-220ENST00000593205 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
BECN1-220ENST00000593205 HLFQ16534 295 aa20.37■□□□□ 0.85
BECN1-220ENST00000593205 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
BECN1-220ENST00000593205 TSPYL4Q9UJ04 414 aa20.37■□□□□ 0.85
BECN1-220ENST00000593205 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
BECN1-220ENST00000593205 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
BECN1-220ENST00000593205 BRIP1Q9BX63 1249 aa20.36■□□□□ 0.85
BECN1-220ENST00000593205 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
BECN1-220ENST00000593205 H0YIN7 160 aa20.34■□□□□ 0.85
BECN1-220ENST00000593205 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
BECN1-220ENST00000593205 TTLL7Q6ZT98 887 aa20.34■□□□□ 0.85
BECN1-220ENST00000593205 CNBD1Q8NA66 436 aa20.34■□□□□ 0.85
BECN1-220ENST00000593205 GPBP1L1Q9HC44 474 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms