RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ADCY9O60503 1353 aa24.03■■□□□ 1.44
CIRBP-243ENST00000593128 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
CIRBP-243ENST00000593128 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
CIRBP-243ENST00000593128 ZNF330Q9Y3S2 320 aaPredicted RBP24.03■■□□□ 1.44
CIRBP-243ENST00000593128 U2AF1L5P0DN76 240 aaPredicted RBP24.02■■□□□ 1.44
CIRBP-243ENST00000593128 U2AF1Q01081 240 aaKnown RBP eCLIP24.02■■□□□ 1.44
CIRBP-243ENST00000593128 VSIG10Q8N0Z9 540 aa24.02■■□□□ 1.44
CIRBP-243ENST00000593128 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
CIRBP-243ENST00000593128 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
CIRBP-243ENST00000593128 POLRMTO00411 1230 aaKnown RBP24.01■■□□□ 1.43
CIRBP-243ENST00000593128 STARD3NLO95772 234 aa24.01■■□□□ 1.43
CIRBP-243ENST00000593128 PPP2R1AP30153 589 aa24.01■■□□□ 1.43
CIRBP-243ENST00000593128 CHRNA5P30532 468 aa24■■□□□ 1.43
CIRBP-243ENST00000593128 ZNF496Q96IT1 587 aaPredicted RBP24■■□□□ 1.43
CIRBP-243ENST00000593128 PIM2Q9P1W9 311 aa24■■□□□ 1.43
CIRBP-243ENST00000593128 NARFQ9UHQ1 456 aa24■■□□□ 1.43
CIRBP-243ENST00000593128 SIPA1L3O60292 1781 aaPredicted RBP24■■□□□ 1.43
CIRBP-243ENST00000593128 TM4SF1P30408 202 aa23.99■■□□□ 1.43
CIRBP-243ENST00000593128 ZNF790Q6PG37 636 aa23.99■■□□□ 1.43
CIRBP-243ENST00000593128 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
CIRBP-243ENST00000593128 KCNA3P22001 575 aa23.98■■□□□ 1.43
CIRBP-243ENST00000593128 NFIXQ14938 502 aa23.98■■□□□ 1.43
CIRBP-243ENST00000593128 BICDL1Q6ZP65 573 aa23.98■■□□□ 1.43
CIRBP-243ENST00000593128 AFDNP55196 1824 aaKnown RBP23.98■■□□□ 1.43
CIRBP-243ENST00000593128 DALRD3Q5D0E6 543 aaKnown RBP23.97■■□□□ 1.43
CIRBP-243ENST00000593128 HEG1Q9ULI3 1381 aa23.97■■□□□ 1.43
CIRBP-243ENST00000593128 BTBD11A6QL63 1104 aa23.96■■□□□ 1.43
CIRBP-243ENST00000593128 ARFGEF1Q9Y6D6 1849 aa23.96■■□□□ 1.43
CIRBP-243ENST00000593128 RTF1Q92541 710 aaKnown RBP23.95■■□□□ 1.42
CIRBP-243ENST00000593128 FMNL2Q96PY5 1086 aa23.95■■□□□ 1.42
CIRBP-243ENST00000593128 KCNQ3O43525 872 aa23.94■■□□□ 1.42
CIRBP-243ENST00000593128 NPM2Q86SE8 214 aaKnown RBP23.94■■□□□ 1.42
CIRBP-243ENST00000593128 BCL2L12Q9HB09 334 aa23.94■■□□□ 1.42
CIRBP-243ENST00000593128 A0A087WZG4 1122 aa23.93■■□□□ 1.42
CIRBP-243ENST00000593128 SERPINB2P05120 415 aa23.93■■□□□ 1.42
CIRBP-243ENST00000593128 MCM10Q7L590 875 aa23.93■■□□□ 1.42
CIRBP-243ENST00000593128 TEX13AQ9BXU3 409 aaPredicted RBP23.93■■□□□ 1.42
CIRBP-243ENST00000593128 TBC1D2BQ9UPU7 963 aa23.92■■□□□ 1.42
CIRBP-243ENST00000593128 CEMIPQ8WUJ3 1361 aa23.91■■□□□ 1.42
CIRBP-243ENST00000593128 A1BGP04217 495 aa23.91■■□□□ 1.42
CIRBP-243ENST00000593128 EIF5P55010 431 aaKnown RBP23.91■■□□□ 1.42
CIRBP-243ENST00000593128 C9orf131Q5VYM1 1079 aa23.91■■□□□ 1.42
CIRBP-243ENST00000593128 DCTN1Q14203 1278 aa23.9■■□□□ 1.42
CIRBP-243ENST00000593128 NRXN2Q9P2S2 1712 aa23.88■■□□□ 1.41
CIRBP-243ENST00000593128 PIP4K2AP48426 406 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-243ENST00000593128 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
CIRBP-243ENST00000593128 C2CD5Q86YS7 1000 aa23.88■■□□□ 1.41
CIRBP-243ENST00000593128 SCN7AQ01118 1682 aa23.88■■□□□ 1.41
CIRBP-243ENST00000593128 KIF3CO14782 793 aa23.87■■□□□ 1.41
CIRBP-243ENST00000593128 NPHP1O15259 732 aa23.87■■□□□ 1.41
CIRBP-243ENST00000593128 NEFMP07197 916 aa23.87■■□□□ 1.41
CIRBP-243ENST00000593128 RNF181Q9P0P0 153 aa23.87■■□□□ 1.41
CIRBP-243ENST00000593128 IL6STP40189 918 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-243ENST00000593128 CCDC24Q8N4L8 307 aa23.86■■□□□ 1.41
CIRBP-243ENST00000593128 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
CIRBP-243ENST00000593128 PRAMEF22A3QJZ6 481 aa23.85■■□□□ 1.41
CIRBP-243ENST00000593128 DLEC1Q9Y238 1755 aa23.84■■□□□ 1.41
CIRBP-243ENST00000593128 H0YIN7 160 aa23.84■■□□□ 1.41
CIRBP-243ENST00000593128 NMRK2Q9NPI5 230 aa23.84■■□□□ 1.41
CIRBP-243ENST00000593128 USP16Q9Y5T5 823 aa23.84■■□□□ 1.41
CIRBP-243ENST00000593128 RASSF7Q02833 373 aa23.83■■□□□ 1.41
CIRBP-243ENST00000593128 DZIP3Q86Y13 1208 aaKnown RBP23.83■■□□□ 1.41
CIRBP-243ENST00000593128 HSPA6P17066 643 aa23.82■■□□□ 1.4
CIRBP-243ENST00000593128 TTLL6Q8N841 843 aa23.82■■□□□ 1.4
CIRBP-243ENST00000593128 ZNF622Q969S3 477 aaKnown RBP eCLIP23.82■■□□□ 1.4
CIRBP-243ENST00000593128 DLG5Q8TDM6 1919 aa23.81■■□□□ 1.4
CIRBP-243ENST00000593128 SNRPA1P09661 255 aaKnown RBP23.81■■□□□ 1.4
CIRBP-243ENST00000593128 SETDB2Q96T68 719 aa23.81■■□□□ 1.4
CIRBP-243ENST00000593128 MIS18AQ9NYP9 233 aa23.81■■□□□ 1.4
CIRBP-243ENST00000593128 ZNF219Q9P2Y4 722 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-243ENST00000593128 SBF1O95248 1867 aa23.81■■□□□ 1.4
CIRBP-243ENST00000593128 ANKRD31Q8N7Z5 1873 aa23.81■■□□□ 1.4
CIRBP-243ENST00000593128 BCORQ6W2J9 1755 aa23.8■■□□□ 1.4
CIRBP-243ENST00000593128 CAMTA2O94983 1202 aa23.79■■□□□ 1.4
CIRBP-243ENST00000593128 PRR5LQ6MZQ0 368 aa23.79■■□□□ 1.4
CIRBP-243ENST00000593128 C16orf71Q8IYS4 520 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-243ENST00000593128 CEP350Q5VT06 3117 aa23.78■■□□□ 1.4
CIRBP-243ENST00000593128 HTATSF1O43719 755 aaKnown RBP23.78■■□□□ 1.4
CIRBP-243ENST00000593128 CNBD1Q8NA66 436 aa23.78■■□□□ 1.4
CIRBP-243ENST00000593128 COL11A2P13942 1736 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-243ENST00000593128 PDE6BP35913 854 aa23.77■■□□□ 1.4
CIRBP-243ENST00000593128 TAF7Q15545 349 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-243ENST00000593128 KDM2BQ8NHM5 1336 aa23.77■■□□□ 1.4
CIRBP-243ENST00000593128 CACNA1SQ13698 1873 aa23.77■■□□□ 1.4
CIRBP-243ENST00000593128 TOMM70O94826 608 aa23.76■■□□□ 1.39
CIRBP-243ENST00000593128 ST5P78524 1137 aa23.76■■□□□ 1.39
CIRBP-243ENST00000593128 BRIP1Q9BX63 1249 aa23.76■■□□□ 1.39
CIRBP-243ENST00000593128 MAPK8IP3Q9UPT6 1336 aa23.76■■□□□ 1.39
CIRBP-243ENST00000593128 CCDC88AQ3V6T2 1871 aa23.75■■□□□ 1.39
CIRBP-243ENST00000593128 NGEFQ8N5V2 710 aa23.74■■□□□ 1.39
CIRBP-243ENST00000593128 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
CIRBP-243ENST00000593128 RRAGCQ9HB90 399 aa23.74■■□□□ 1.39
CIRBP-243ENST00000593128 ZNF652Q9Y2D9 606 aa23.74■■□□□ 1.39
CIRBP-243ENST00000593128 FAM177BA6PVY3 158 aa23.73■■□□□ 1.39
CIRBP-243ENST00000593128 C21orf2O43822 256 aa23.73■■□□□ 1.39
CIRBP-243ENST00000593128 LMNB1P20700 586 aa23.73■■□□□ 1.39
CIRBP-243ENST00000593128 NBPF5PQ86XG9 351 aaPredicted RBP23.73■■□□□ 1.39
CIRBP-243ENST00000593128 LAMB4A4D0S4 1761 aa23.73■■□□□ 1.39
CIRBP-243ENST00000593128 NBPF26B4DH59 902 aa23.72■■□□□ 1.39
CIRBP-243ENST00000593128 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms