RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
CIRBP-241ENST00000593048 NARFQ9UHQ1 456 aa21.56■■□□□ 1.04
CIRBP-241ENST00000593048 FCHSD2O94868 740 aa21.55■■□□□ 1.04
CIRBP-241ENST00000593048 DDR1Q08345 913 aa21.55■■□□□ 1.04
CIRBP-241ENST00000593048 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
CIRBP-241ENST00000593048 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-241ENST00000593048 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-241ENST00000593048 COL15A1P39059 1388 aa21.55■■□□□ 1.04
CIRBP-241ENST00000593048 ADAMTS7Q9UKP4 1686 aa21.55■■□□□ 1.04
CIRBP-241ENST00000593048 KIF13BQ9NQT8 1826 aa21.55■■□□□ 1.04
CIRBP-241ENST00000593048 TM4SF1P30408 202 aa21.54■■□□□ 1.04
CIRBP-241ENST00000593048 ZNF526Q8TF50 670 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-241ENST00000593048 GPBP1L1Q9HC44 474 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-241ENST00000593048 KIAA1551Q9HCM1 1747 aa21.53■■□□□ 1.04
CIRBP-241ENST00000593048 BTBD11A6QL63 1104 aa21.53■■□□□ 1.04
CIRBP-241ENST00000593048 ARHGAP27Q6ZUM4 889 aa21.53■■□□□ 1.04
CIRBP-241ENST00000593048 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
CIRBP-241ENST00000593048 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
CIRBP-241ENST00000593048 HEG1Q9ULI3 1381 aa21.52■■□□□ 1.04
CIRBP-241ENST00000593048 A0A087WZG4 1122 aa21.52■■□□□ 1.04
CIRBP-241ENST00000593048 POLRMTO00411 1230 aaKnown RBP21.52■■□□□ 1.04
CIRBP-241ENST00000593048 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
CIRBP-241ENST00000593048 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
CIRBP-241ENST00000593048 ZNF330Q9Y3S2 320 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-241ENST00000593048 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-241ENST00000593048 NEFMP07197 916 aa21.5■■□□□ 1.03
CIRBP-241ENST00000593048 CEMIPQ8WUJ3 1361 aa21.49■■□□□ 1.03
CIRBP-241ENST00000593048 KCNA3P22001 575 aa21.49■■□□□ 1.03
CIRBP-241ENST00000593048 NFIXQ14938 502 aa21.49■■□□□ 1.03
CIRBP-241ENST00000593048 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
CIRBP-241ENST00000593048 DALRD3Q5D0E6 543 aaKnown RBP21.48■■□□□ 1.03
CIRBP-241ENST00000593048 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
CIRBP-241ENST00000593048 MCM10Q7L590 875 aa21.48■■□□□ 1.03
CIRBP-241ENST00000593048 KCNQ3O43525 872 aa21.47■■□□□ 1.03
CIRBP-241ENST00000593048 SERPINB2P05120 415 aa21.47■■□□□ 1.03
CIRBP-241ENST00000593048 CHRNA5P30532 468 aa21.47■■□□□ 1.03
CIRBP-241ENST00000593048 BICDL1Q6ZP65 573 aa21.47■■□□□ 1.03
CIRBP-241ENST00000593048 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
CIRBP-241ENST00000593048 HSPA6P17066 643 aa21.46■■□□□ 1.03
CIRBP-241ENST00000593048 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
CIRBP-241ENST00000593048 A1BGP04217 495 aa21.45■■□□□ 1.02
CIRBP-241ENST00000593048 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-241ENST00000593048 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
CIRBP-241ENST00000593048 TBC1D2BQ9UPU7 963 aa21.45■■□□□ 1.02
CIRBP-241ENST00000593048 BRCA1P38398 1863 aaKnown RBP21.45■■□□□ 1.02
CIRBP-241ENST00000593048 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
CIRBP-241ENST00000593048 KIF3CO14782 793 aa21.43■■□□□ 1.02
CIRBP-241ENST00000593048 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
CIRBP-241ENST00000593048 TBC1D9BQ66K14 1250 aa21.41■■□□□ 1.02
CIRBP-241ENST00000593048 PNNQ9H307 717 aaKnown RBP21.41■■□□□ 1.02
CIRBP-241ENST00000593048 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
CIRBP-241ENST00000593048 SIPA1L3O60292 1781 aaPredicted RBP21.41■■□□□ 1.02
CIRBP-241ENST00000593048 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-241ENST00000593048 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
CIRBP-241ENST00000593048 H0YIN7 160 aa21.39■■□□□ 1.01
CIRBP-241ENST00000593048 NPHP1O15259 732 aa21.39■■□□□ 1.01
CIRBP-241ENST00000593048 C2CD5Q86YS7 1000 aa21.39■■□□□ 1.01
CIRBP-241ENST00000593048 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
CIRBP-241ENST00000593048 PIP4K2AP48426 406 aaPredicted RBP21.38■■□□□ 1.01
CIRBP-241ENST00000593048 DZIP3Q86Y13 1208 aaKnown RBP21.38■■□□□ 1.01
CIRBP-241ENST00000593048 SETDB2Q96T68 719 aa21.38■■□□□ 1.01
CIRBP-241ENST00000593048 MAPK8IP3Q9UPT6 1336 aa21.37■■□□□ 1.01
CIRBP-241ENST00000593048 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
CIRBP-241ENST00000593048 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
CIRBP-241ENST00000593048 CAMTA2O94983 1202 aa21.36■■□□□ 1.01
CIRBP-241ENST00000593048 TTLL6Q8N841 843 aa21.36■■□□□ 1.01
CIRBP-241ENST00000593048 RNF181Q9P0P0 153 aa21.36■■□□□ 1.01
CIRBP-241ENST00000593048 CARMIL3Q8ND23 1372 aa21.36■■□□□ 1.01
CIRBP-241ENST00000593048 PDE6BP35913 854 aa21.35■■□□□ 1.01
CIRBP-241ENST00000593048 RALBP1Q15311 655 aa21.35■■□□□ 1.01
CIRBP-241ENST00000593048 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
CIRBP-241ENST00000593048 PNISRQ8TF01 805 aaKnown RBP21.35■■□□□ 1.01
CIRBP-241ENST00000593048 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
CIRBP-241ENST00000593048 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
CIRBP-241ENST00000593048 CCDC24Q8N4L8 307 aa21.34■■□□□ 1.01
CIRBP-241ENST00000593048 ZNF622Q969S3 477 aaKnown RBP eCLIP21.34■■□□□ 1.01
CIRBP-241ENST00000593048 BRIP1Q9BX63 1249 aa21.34■■□□□ 1.01
CIRBP-241ENST00000593048 PDZRN3Q9UPQ7 1066 aa21.34■■□□□ 1.01
CIRBP-241ENST00000593048 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
CIRBP-241ENST00000593048 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1.01
CIRBP-241ENST00000593048 CNBD1Q8NA66 436 aa21.33■■□□□ 1.01
CIRBP-241ENST00000593048 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
CIRBP-241ENST00000593048 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
CIRBP-241ENST00000593048 ST5P78524 1137 aa21.32■■□□□ 1
CIRBP-241ENST00000593048 CLEC4GQ6UXB4 293 aa21.31■■□□□ 1
CIRBP-241ENST00000593048 RASSF7Q02833 373 aa21.3■■□□□ 1
CIRBP-241ENST00000593048 NMRK2Q9NPI5 230 aa21.3■■□□□ 1
CIRBP-241ENST00000593048 SCN7AQ01118 1682 aa21.3■■□□□ 1
CIRBP-241ENST00000593048 TOMM70O94826 608 aa21.29■■□□□ 1
CIRBP-241ENST00000593048 NBPF5PQ86XG9 351 aaPredicted RBP21.29■■□□□ 1
CIRBP-241ENST00000593048 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
CIRBP-241ENST00000593048 THUMPD2Q9BTF0 503 aaKnown RBP21.29■■□□□ 1
CIRBP-241ENST00000593048 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
CIRBP-241ENST00000593048 NBPF26B4DH59 902 aa21.28■■□□□ 1
CIRBP-241ENST00000593048 NBPF10Q6P3W6 841 aaKnown RBP21.28■■□□□ 1
CIRBP-241ENST00000593048 NBPF15Q8N660 670 aa21.28■■□□□ 1
CIRBP-241ENST00000593048 ZNF219Q9P2Y4 722 aaPredicted RBP21.28■■□□□ 1
CIRBP-241ENST00000593048 LMNB1P20700 586 aa21.27■■□□□ 1
CIRBP-241ENST00000593048 APLP1P51693 650 aa21.27■■□□□ 1
CIRBP-241ENST00000593048 NGEFQ8N5V2 710 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms