RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 PLEKHF1Q96S99 279 aa22.36■■□□□ 1.17
AP3D1-212ENST00000592488 PARP3Q9Y6F1 533 aa22.36■■□□□ 1.17
AP3D1-212ENST00000592488 MAPK8IP3Q9UPT6 1336 aa22.35■■□□□ 1.17
AP3D1-212ENST00000592488 C10orf71Q711Q0 1435 aa22.35■■□□□ 1.17
AP3D1-212ENST00000592488 ZPR1O75312 459 aa22.35■■□□□ 1.17
AP3D1-212ENST00000592488 YBX3P16989 372 aaKnown RBP eCLIP22.35■■□□□ 1.17
AP3D1-212ENST00000592488 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
AP3D1-212ENST00000592488 FKBP8Q14318 412 aa22.35■■□□□ 1.17
AP3D1-212ENST00000592488 KIF13BQ9NQT8 1826 aa22.34■■□□□ 1.17
AP3D1-212ENST00000592488 DLG5Q8TDM6 1919 aa22.34■■□□□ 1.17
AP3D1-212ENST00000592488 GRIN3BO60391 1043 aa22.34■■□□□ 1.17
AP3D1-212ENST00000592488 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
AP3D1-212ENST00000592488 KCNQ3O43525 872 aa22.33■■□□□ 1.17
AP3D1-212ENST00000592488 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
AP3D1-212ENST00000592488 USPL1Q5W0Q7 1092 aa22.33■■□□□ 1.17
AP3D1-212ENST00000592488 NARFQ9UHQ1 456 aa22.33■■□□□ 1.17
AP3D1-212ENST00000592488 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
AP3D1-212ENST00000592488 EIF5P55010 431 aaKnown RBP22.3■■□□□ 1.16
AP3D1-212ENST00000592488 DDR1Q08345 913 aa22.3■■□□□ 1.16
AP3D1-212ENST00000592488 TAF7Q15545 349 aaPredicted RBP22.3■■□□□ 1.16
AP3D1-212ENST00000592488 KIAA1551Q9HCM1 1747 aa22.29■■□□□ 1.16
AP3D1-212ENST00000592488 A0A087WZG4 1122 aa22.29■■□□□ 1.16
AP3D1-212ENST00000592488 TGFB2P61812 414 aa22.29■■□□□ 1.16
AP3D1-212ENST00000592488 TM4SF1P30408 202 aa22.28■■□□□ 1.16
AP3D1-212ENST00000592488 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
AP3D1-212ENST00000592488 POLRMTO00411 1230 aaKnown RBP22.27■■□□□ 1.16
AP3D1-212ENST00000592488 SNRPA1P09661 255 aaKnown RBP22.27■■□□□ 1.16
AP3D1-212ENST00000592488 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
AP3D1-212ENST00000592488 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
AP3D1-212ENST00000592488 N4BP2Q86UW6 1770 aaPredicted RBP22.26■■□□□ 1.15
AP3D1-212ENST00000592488 A1BGP04217 495 aa22.26■■□□□ 1.15
AP3D1-212ENST00000592488 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
AP3D1-212ENST00000592488 BCL2L12Q9HB09 334 aa22.26■■□□□ 1.15
AP3D1-212ENST00000592488 ZNF330Q9Y3S2 320 aaPredicted RBP22.26■■□□□ 1.15
AP3D1-212ENST00000592488 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
AP3D1-212ENST00000592488 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
AP3D1-212ENST00000592488 SCN7AQ01118 1682 aa22.25■■□□□ 1.15
AP3D1-212ENST00000592488 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
AP3D1-212ENST00000592488 A0A0G2JLW4 131 aa22.24■■□□□ 1.15
AP3D1-212ENST00000592488 PRAMEF22A3QJZ6 481 aa22.24■■□□□ 1.15
AP3D1-212ENST00000592488 NFIXQ14938 502 aa22.24■■□□□ 1.15
AP3D1-212ENST00000592488 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
AP3D1-212ENST00000592488 ZNF784Q8NCA9 323 aaPredicted RBP22.24■■□□□ 1.15
AP3D1-212ENST00000592488 THUMPD2Q9BTF0 503 aaKnown RBP22.24■■□□□ 1.15
AP3D1-212ENST00000592488 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
AP3D1-212ENST00000592488 DPEP1P16444 411 aa22.23■■□□□ 1.15
AP3D1-212ENST00000592488 RIPK4P57078 832 aa22.22■■□□□ 1.15
AP3D1-212ENST00000592488 NRXN2Q9P2S2 1712 aa22.21■■□□□ 1.15
AP3D1-212ENST00000592488 TBC1D2BQ9UPU7 963 aa22.21■■□□□ 1.15
AP3D1-212ENST00000592488 AFDNP55196 1824 aaKnown RBP22.21■■□□□ 1.15
AP3D1-212ENST00000592488 LAMB4A4D0S4 1761 aa22.2■■□□□ 1.14
AP3D1-212ENST00000592488 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
AP3D1-212ENST00000592488 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.14
AP3D1-212ENST00000592488 BRCA1P38398 1863 aaKnown RBP22.2■■□□□ 1.14
AP3D1-212ENST00000592488 PIP4K2AP48426 406 aaPredicted RBP22.19■■□□□ 1.14
AP3D1-212ENST00000592488 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
AP3D1-212ENST00000592488 BCS1LQ9Y276 419 aa22.19■■□□□ 1.14
AP3D1-212ENST00000592488 BCORQ6W2J9 1755 aa22.18■■□□□ 1.14
AP3D1-212ENST00000592488 SERPINB2P05120 415 aa22.18■■□□□ 1.14
AP3D1-212ENST00000592488 BICDL1Q6ZP65 573 aa22.18■■□□□ 1.14
AP3D1-212ENST00000592488 DZIP3Q86Y13 1208 aaKnown RBP22.18■■□□□ 1.14
AP3D1-212ENST00000592488 CAMTA2O94983 1202 aa22.17■■□□□ 1.14
AP3D1-212ENST00000592488 EIF4A1P60842 406 aaKnown RBP22.17■■□□□ 1.14
AP3D1-212ENST00000592488 TBC1D9BQ66K14 1250 aa22.17■■□□□ 1.14
AP3D1-212ENST00000592488 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
AP3D1-212ENST00000592488 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
AP3D1-212ENST00000592488 NBPF26B4DH59 902 aa22.16■■□□□ 1.14
AP3D1-212ENST00000592488 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
AP3D1-212ENST00000592488 KCNA3P22001 575 aa22.16■■□□□ 1.14
AP3D1-212ENST00000592488 NBPF10Q6P3W6 841 aaKnown RBP22.16■■□□□ 1.14
AP3D1-212ENST00000592488 NBPF15Q8N660 670 aa22.16■■□□□ 1.14
AP3D1-212ENST00000592488 PIM2Q9P1W9 311 aa22.16■■□□□ 1.14
AP3D1-212ENST00000592488 RRP7AQ9Y3A4 280 aaKnown RBP22.16■■□□□ 1.14
AP3D1-212ENST00000592488 CARMIL3Q8ND23 1372 aa22.15■■□□□ 1.14
AP3D1-212ENST00000592488 CHRNA5P30532 468 aa22.15■■□□□ 1.14
AP3D1-212ENST00000592488 TSPYL4Q9UJ04 414 aa22.15■■□□□ 1.14
AP3D1-212ENST00000592488 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
AP3D1-212ENST00000592488 ARFGEF1Q9Y6D6 1849 aa22.13■■□□□ 1.13
AP3D1-212ENST00000592488 DALRD3Q5D0E6 543 aaKnown RBP22.13■■□□□ 1.13
AP3D1-212ENST00000592488 BABAM1Q9NWV8 329 aa22.13■■□□□ 1.13
AP3D1-212ENST00000592488 ZNF316A6NFI3 1004 aaPredicted RBP22.12■■□□□ 1.13
AP3D1-212ENST00000592488 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
AP3D1-212ENST00000592488 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
AP3D1-212ENST00000592488 CLEC4GQ6UXB4 293 aa22.11■■□□□ 1.13
AP3D1-212ENST00000592488 ATP10DQ9P241 1426 aa22.11■■□□□ 1.13
AP3D1-212ENST00000592488 ADCY9O60503 1353 aa22.11■■□□□ 1.13
AP3D1-212ENST00000592488 RGL2O15211 777 aa22.1■■□□□ 1.13
AP3D1-212ENST00000592488 PRR5LQ6MZQ0 368 aa22.1■■□□□ 1.13
AP3D1-212ENST00000592488 DLEC1Q9Y238 1755 aa22.1■■□□□ 1.13
AP3D1-212ENST00000592488 ARHGAP27Q6ZUM4 889 aa22.09■■□□□ 1.13
AP3D1-212ENST00000592488 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
AP3D1-212ENST00000592488 C2CD5Q86YS7 1000 aa22.08■■□□□ 1.13
AP3D1-212ENST00000592488 CNBD1Q8NA66 436 aa22.08■■□□□ 1.13
AP3D1-212ENST00000592488 ERBB4Q15303 1308 aa22.07■■□□□ 1.12
AP3D1-212ENST00000592488 ANKRD31Q8N7Z5 1873 aa22.07■■□□□ 1.12
AP3D1-212ENST00000592488 H0YIN7 160 aa22.07■■□□□ 1.12
AP3D1-212ENST00000592488 NPHP1O15259 732 aa22.07■■□□□ 1.12
AP3D1-212ENST00000592488 BRIP1Q9BX63 1249 aa22.07■■□□□ 1.12
AP3D1-212ENST00000592488 PDE6BP35913 854 aa22.06■■□□□ 1.12
AP3D1-212ENST00000592488 PDZRN3Q9UPQ7 1066 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms