RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 SBF1O95248 1867 aa24.92■■□□□ 1.58
CIRBP-238ENST00000592412 ZBTB1Q9Y2K1 713 aa24.91■■□□□ 1.58
CIRBP-238ENST00000592412 WDR90Q96KV7 1748 aa24.91■■□□□ 1.58
CIRBP-238ENST00000592412 RBM46Q8TBY0 533 aaKnown RBP24.9■■□□□ 1.58
CIRBP-238ENST00000592412 BCL2L12Q9HB09 334 aa24.9■■□□□ 1.58
CIRBP-238ENST00000592412 RNF181Q9P0P0 153 aa24.9■■□□□ 1.58
CIRBP-238ENST00000592412 COL15A1P39059 1388 aa24.9■■□□□ 1.58
CIRBP-238ENST00000592412 ZPR1O75312 459 aa24.89■■□□□ 1.58
CIRBP-238ENST00000592412 NFIXQ14938 502 aa24.89■■□□□ 1.58
CIRBP-238ENST00000592412 MTHFSDQ2M296 383 aaKnown RBP24.89■■□□□ 1.58
CIRBP-238ENST00000592412 UBR2Q8IWV8 1755 aa24.89■■□□□ 1.57
CIRBP-238ENST00000592412 KIF7Q2M1P5 1343 aa24.88■■□□□ 1.57
CIRBP-238ENST00000592412 NARFQ9UHQ1 456 aa24.88■■□□□ 1.57
CIRBP-238ENST00000592412 DLEC1Q9Y238 1755 aa24.87■■□□□ 1.57
CIRBP-238ENST00000592412 PER1O15534 1290 aaPredicted RBP24.86■■□□□ 1.57
CIRBP-238ENST00000592412 PRELPP51888 382 aa24.86■■□□□ 1.57
CIRBP-238ENST00000592412 HTRA3P83110 453 aa24.86■■□□□ 1.57
CIRBP-238ENST00000592412 RASSF7Q02833 373 aa24.86■■□□□ 1.57
CIRBP-238ENST00000592412 TNRC6CQ9HCJ0 1690 aaKnown RBP24.85■■□□□ 1.57
CIRBP-238ENST00000592412 CARMIL3Q8ND23 1372 aa24.84■■□□□ 1.57
CIRBP-238ENST00000592412 RRAGCQ9HB90 399 aa24.84■■□□□ 1.57
CIRBP-238ENST00000592412 KDM2BQ8NHM5 1336 aa24.84■■□□□ 1.57
CIRBP-238ENST00000592412 COL3A1P02461 1466 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-238ENST00000592412 VSIG10Q8N0Z9 540 aa24.83■■□□□ 1.57
CIRBP-238ENST00000592412 DIAPH1O60610 1272 aaKnown RBP24.81■■□□□ 1.56
CIRBP-238ENST00000592412 SERPINB2P05120 415 aa24.81■■□□□ 1.56
CIRBP-238ENST00000592412 FSTL1Q12841 308 aa24.81■■□□□ 1.56
CIRBP-238ENST00000592412 C16orf71Q8IYS4 520 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-238ENST00000592412 CANXP27824 592 aaKnown RBP24.79■■□□□ 1.56
CIRBP-238ENST00000592412 EIF5P55010 431 aaKnown RBP24.79■■□□□ 1.56
CIRBP-238ENST00000592412 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
CIRBP-238ENST00000592412 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
CIRBP-238ENST00000592412 KLRG1Q96E93 195 aa24.78■■□□□ 1.56
CIRBP-238ENST00000592412 SIPA1L3O60292 1781 aaPredicted RBP24.77■■□□□ 1.56
CIRBP-238ENST00000592412 ANKRD31Q8N7Z5 1873 aa24.77■■□□□ 1.56
CIRBP-238ENST00000592412 SCN7AQ01118 1682 aa24.77■■□□□ 1.56
CIRBP-238ENST00000592412 ZC3H4Q9UPT8 1303 aaKnown RBP24.77■■□□□ 1.56
CIRBP-238ENST00000592412 TIAM2Q8IVF5 1701 aa24.76■■□□□ 1.55
CIRBP-238ENST00000592412 NFKBIEO00221 500 aa24.76■■□□□ 1.55
CIRBP-238ENST00000592412 JMYQ8N9B5 988 aa24.76■■□□□ 1.55
CIRBP-238ENST00000592412 IL17REQ8NFR9 667 aa24.76■■□□□ 1.55
CIRBP-238ENST00000592412 ZNF496Q96IT1 587 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-238ENST00000592412 LMNB1P20700 586 aa24.75■■□□□ 1.55
CIRBP-238ENST00000592412 C2CD5Q86YS7 1000 aa24.75■■□□□ 1.55
CIRBP-238ENST00000592412 TTLL6Q8N841 843 aa24.75■■□□□ 1.55
CIRBP-238ENST00000592412 BICDL1Q6ZP65 573 aa24.74■■□□□ 1.55
CIRBP-238ENST00000592412 HEG1Q9ULI3 1381 aa24.74■■□□□ 1.55
CIRBP-238ENST00000592412 COL11A2P13942 1736 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-238ENST00000592412 TBC1D9BQ66K14 1250 aa24.73■■□□□ 1.55
CIRBP-238ENST00000592412 CCDC88AQ3V6T2 1871 aa24.72■■□□□ 1.55
CIRBP-238ENST00000592412 GLTPD2A6NH11 291 aa24.72■■□□□ 1.55
CIRBP-238ENST00000592412 STARD3NLO95772 234 aa24.72■■□□□ 1.55
CIRBP-238ENST00000592412 ZNF790Q6PG37 636 aa24.72■■□□□ 1.55
CIRBP-238ENST00000592412 TTC5Q8N0Z6 440 aa24.72■■□□□ 1.55
CIRBP-238ENST00000592412 H0YIN7 160 aa24.71■■□□□ 1.55
CIRBP-238ENST00000592412 SMC1BQ8NDV3 1235 aa24.71■■□□□ 1.55
CIRBP-238ENST00000592412 NPC1L1Q9UHC9 1359 aa24.7■■□□□ 1.55
CIRBP-238ENST00000592412 A0A087WZG4 1122 aa24.69■■□□□ 1.54
CIRBP-238ENST00000592412 GNAT3A8MTJ3 354 aa24.69■■□□□ 1.54
CIRBP-238ENST00000592412 POTECB2RU33 542 aa24.69■■□□□ 1.54
CIRBP-238ENST00000592412 PRR5LQ6MZQ0 368 aa24.69■■□□□ 1.54
CIRBP-238ENST00000592412 CCDC24Q8N4L8 307 aa24.69■■□□□ 1.54
CIRBP-238ENST00000592412 TBC1D2BQ9UPU7 963 aa24.69■■□□□ 1.54
CIRBP-238ENST00000592412 CEMIPQ8WUJ3 1361 aa24.68■■□□□ 1.54
CIRBP-238ENST00000592412 U2SURPO15042 1029 aaKnown RBP24.68■■□□□ 1.54
CIRBP-238ENST00000592412 TEFQ10587 303 aa24.68■■□□□ 1.54
CIRBP-238ENST00000592412 FER1L6Q2WGJ9 1857 aa24.67■■□□□ 1.54
CIRBP-238ENST00000592412 VEGFAP15692 232 aaPredicted RBP24.67■■□□□ 1.54
CIRBP-238ENST00000592412 GAS2L2Q8NHY3 880 aa24.67■■□□□ 1.54
CIRBP-238ENST00000592412 BRIP1Q9BX63 1249 aa24.67■■□□□ 1.54
CIRBP-238ENST00000592412 KCNQ3O43525 872 aa24.66■■□□□ 1.54
CIRBP-238ENST00000592412 IL6STP40189 918 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-238ENST00000592412 COL13A1Q5TAT6 717 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-238ENST00000592412 BCORQ6W2J9 1755 aa24.65■■□□□ 1.54
CIRBP-238ENST00000592412 CAMTA2O94983 1202 aa24.65■■□□□ 1.54
CIRBP-238ENST00000592412 A1BGP04217 495 aa24.65■■□□□ 1.54
CIRBP-238ENST00000592412 CNGB1Q14028 1251 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-238ENST00000592412 PHACTR3Q96KR7 559 aa24.65■■□□□ 1.54
CIRBP-238ENST00000592412 TEX13AQ9BXU3 409 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-238ENST00000592412 ZNF330Q9Y3S2 320 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-238ENST00000592412 C21orf2O43822 256 aa24.64■■□□□ 1.54
CIRBP-238ENST00000592412 ZNF622Q969S3 477 aaKnown RBP eCLIP24.64■■□□□ 1.54
CIRBP-238ENST00000592412 DICER1Q9UPY3 1922 aaKnown RBP24.63■■□□□ 1.53
CIRBP-238ENST00000592412 PDE6BP35913 854 aa24.63■■□□□ 1.53
CIRBP-238ENST00000592412 FMNL2Q96PY5 1086 aa24.63■■□□□ 1.53
CIRBP-238ENST00000592412 ZNF219Q9P2Y4 722 aaPredicted RBP24.63■■□□□ 1.53
CIRBP-238ENST00000592412 RSPH6AQ9H0K4 717 aa24.61■■□□□ 1.53
CIRBP-238ENST00000592412 PDZRN3Q9UPQ7 1066 aa24.61■■□□□ 1.53
CIRBP-238ENST00000592412 SLX4Q8IY92 1834 aa24.61■■□□□ 1.53
CIRBP-238ENST00000592412 PRAMEF22A3QJZ6 481 aa24.59■■□□□ 1.53
CIRBP-238ENST00000592412 PRKAR2BP31323 418 aa24.59■■□□□ 1.53
CIRBP-238ENST00000592412 PIP4K2AP48426 406 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-238ENST00000592412 CNBD1Q8NA66 436 aa24.59■■□□□ 1.53
CIRBP-238ENST00000592412 USP16Q9Y5T5 823 aa24.59■■□□□ 1.53
CIRBP-238ENST00000592412 ARFGEF2Q9Y6D5 1785 aa24.59■■□□□ 1.53
CIRBP-238ENST00000592412 LTBP3Q9NS15 1303 aa24.59■■□□□ 1.53
CIRBP-238ENST00000592412 CACNA1SQ13698 1873 aa24.58■■□□□ 1.53
CIRBP-238ENST00000592412 BTBD11A6QL63 1104 aa24.58■■□□□ 1.53
CIRBP-238ENST00000592412 SETDB2Q96T68 719 aa24.58■■□□□ 1.53
CIRBP-238ENST00000592412 SRGNP10124 158 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms