RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 COL15A1P39059 1388 aa24.62■■□□□ 1.53
CIRBP-237ENST00000592234 FCHSD2O94868 740 aa24.61■■□□□ 1.53
CIRBP-237ENST00000592234 AFDNP55196 1824 aaKnown RBP24.61■■□□□ 1.53
CIRBP-237ENST00000592234 IL17REQ8NFR9 667 aa24.6■■□□□ 1.53
CIRBP-237ENST00000592234 NARFQ9UHQ1 456 aa24.6■■□□□ 1.53
CIRBP-237ENST00000592234 POLRMTO00411 1230 aaKnown RBP24.59■■□□□ 1.53
CIRBP-237ENST00000592234 TM4SF1P30408 202 aa24.59■■□□□ 1.53
CIRBP-237ENST00000592234 NUDCQ9Y266 331 aa24.59■■□□□ 1.53
CIRBP-237ENST00000592234 KCNA3P22001 575 aa24.58■■□□□ 1.53
CIRBP-237ENST00000592234 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
CIRBP-237ENST00000592234 PRKAR2BP31323 418 aa24.58■■□□□ 1.53
CIRBP-237ENST00000592234 ARHGAP27Q6ZUM4 889 aa24.58■■□□□ 1.53
CIRBP-237ENST00000592234 PIM2Q9P1W9 311 aa24.58■■□□□ 1.53
CIRBP-237ENST00000592234 STARD3NLO95772 234 aa24.57■■□□□ 1.52
CIRBP-237ENST00000592234 ZNF790Q6PG37 636 aa24.57■■□□□ 1.52
CIRBP-237ENST00000592234 RSPH6AQ9H0K4 717 aa24.57■■□□□ 1.52
CIRBP-237ENST00000592234 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
CIRBP-237ENST00000592234 ZNF496Q96IT1 587 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-237ENST00000592234 PHACTR3Q96KR7 559 aa24.56■■□□□ 1.52
CIRBP-237ENST00000592234 HEG1Q9ULI3 1381 aa24.55■■□□□ 1.52
CIRBP-237ENST00000592234 U2AF1L5P0DN76 240 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-237ENST00000592234 U2AF1Q01081 240 aaKnown RBP eCLIP24.54■■□□□ 1.527e-7■■■■□ 23.3
CIRBP-237ENST00000592234 NFIXQ14938 502 aa24.54■■□□□ 1.52
CIRBP-237ENST00000592234 TEX13AQ9BXU3 409 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-237ENST00000592234 NRXN2Q9P2S2 1712 aa24.54■■□□□ 1.52
CIRBP-237ENST00000592234 CEMIPQ8WUJ3 1361 aa24.54■■□□□ 1.52
CIRBP-237ENST00000592234 CHRNA5P30532 468 aa24.53■■□□□ 1.52
CIRBP-237ENST00000592234 DALRD3Q5D0E6 543 aaKnown RBP24.53■■□□□ 1.52
CIRBP-237ENST00000592234 A0A087WZG4 1122 aa24.52■■□□□ 1.52
CIRBP-237ENST00000592234 FMNL2Q96PY5 1086 aa24.52■■□□□ 1.52
CIRBP-237ENST00000592234 BCL2L12Q9HB09 334 aa24.52■■□□□ 1.52
CIRBP-237ENST00000592234 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
CIRBP-237ENST00000592234 EIF5P55010 431 aaKnown RBP24.51■■□□□ 1.51
CIRBP-237ENST00000592234 SERPINB2P05120 415 aa24.5■■□□□ 1.51
CIRBP-237ENST00000592234 ZNF330Q9Y3S2 320 aaPredicted RBP24.5■■□□□ 1.51
CIRBP-237ENST00000592234 RTF1Q92541 710 aaKnown RBP24.49■■□□□ 1.51
CIRBP-237ENST00000592234 SBF1O95248 1867 aa24.48■■□□□ 1.51
CIRBP-237ENST00000592234 SCN7AQ01118 1682 aa24.48■■□□□ 1.51
CIRBP-237ENST00000592234 DLEC1Q9Y238 1755 aa24.48■■□□□ 1.51
CIRBP-237ENST00000592234 KCNQ3O43525 872 aa24.47■■□□□ 1.51
CIRBP-237ENST00000592234 BICDL1Q6ZP65 573 aa24.47■■□□□ 1.51
CIRBP-237ENST00000592234 KIF3CO14782 793 aa24.46■■□□□ 1.51
CIRBP-237ENST00000592234 IL6STP40189 918 aaPredicted RBP24.46■■□□□ 1.51
CIRBP-237ENST00000592234 C9orf131Q5VYM1 1079 aa24.46■■□□□ 1.51
CIRBP-237ENST00000592234 NPM2Q86SE8 214 aaKnown RBP24.46■■□□□ 1.51
CIRBP-237ENST00000592234 MCM10Q7L590 875 aa24.45■■□□□ 1.5
CIRBP-237ENST00000592234 TBC1D2BQ9UPU7 963 aa24.45■■□□□ 1.5
CIRBP-237ENST00000592234 A1BGP04217 495 aa24.44■■□□□ 1.5
CIRBP-237ENST00000592234 DLG5Q8TDM6 1919 aa24.43■■□□□ 1.5
CIRBP-237ENST00000592234 TBC1D9BQ66K14 1250 aa24.43■■□□□ 1.5
CIRBP-237ENST00000592234 CEP350Q5VT06 3117 aa24.42■■□□□ 1.5
CIRBP-237ENST00000592234 ANKRD31Q8N7Z5 1873 aa24.42■■□□□ 1.5
CIRBP-237ENST00000592234 BCORQ6W2J9 1755 aa24.42■■□□□ 1.5
CIRBP-237ENST00000592234 CARMIL3Q8ND23 1372 aa24.42■■□□□ 1.5
CIRBP-237ENST00000592234 HSPA6P17066 643 aa24.41■■□□□ 1.5
CIRBP-237ENST00000592234 DCTN1Q14203 1278 aa24.41■■□□□ 1.5
CIRBP-237ENST00000592234 C2CD5Q86YS7 1000 aa24.41■■□□□ 1.5
CIRBP-237ENST00000592234 RNF181Q9P0P0 153 aa24.41■■□□□ 1.5
CIRBP-237ENST00000592234 H0YIN7 160 aa24.4■■□□□ 1.5
CIRBP-237ENST00000592234 HTATSF1O43719 755 aaKnown RBP24.4■■□□□ 1.5
CIRBP-237ENST00000592234 NEFMP07197 916 aa24.4■■□□□ 1.5
CIRBP-237ENST00000592234 USP16Q9Y5T5 823 aa24.4■■□□□ 1.5
CIRBP-237ENST00000592234 CCDC88AQ3V6T2 1871 aa24.4■■□□□ 1.5
CIRBP-237ENST00000592234 TTLL6Q8N841 843 aa24.39■■□□□ 1.49
CIRBP-237ENST00000592234 SNRPA1P09661 255 aaKnown RBP24.38■■□□□ 1.49
CIRBP-237ENST00000592234 NMRK2Q9NPI5 230 aa24.38■■□□□ 1.49
CIRBP-237ENST00000592234 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
CIRBP-237ENST00000592234 CAMTA2O94983 1202 aa24.37■■□□□ 1.49
CIRBP-237ENST00000592234 DZIP3Q86Y13 1208 aaKnown RBP24.37■■□□□ 1.49
CIRBP-237ENST00000592234 TOMM70O94826 608 aa24.36■■□□□ 1.49
CIRBP-237ENST00000592234 PIP4K2AP48426 406 aaPredicted RBP24.36■■□□□ 1.49
CIRBP-237ENST00000592234 RASSF7Q02833 373 aa24.36■■□□□ 1.49
CIRBP-237ENST00000592234 SETDB2Q96T68 719 aa24.36■■□□□ 1.49
CIRBP-237ENST00000592234 NPHP1O15259 732 aa24.35■■□□□ 1.49
CIRBP-237ENST00000592234 PDE6BP35913 854 aa24.35■■□□□ 1.49
CIRBP-237ENST00000592234 TAF7Q15545 349 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-237ENST00000592234 PRR5LQ6MZQ0 368 aa24.35■■□□□ 1.49
CIRBP-237ENST00000592234 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
CIRBP-237ENST00000592234 COL11A2P13942 1736 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-237ENST00000592234 KDM2BQ8NHM5 1336 aa24.35■■□□□ 1.49
CIRBP-237ENST00000592234 CCDC24Q8N4L8 307 aa24.34■■□□□ 1.49
CIRBP-237ENST00000592234 BRIP1Q9BX63 1249 aa24.34■■□□□ 1.49
CIRBP-237ENST00000592234 CACNA1SQ13698 1873 aa24.34■■□□□ 1.49
CIRBP-237ENST00000592234 CNBD1Q8NA66 436 aa24.33■■□□□ 1.49
CIRBP-237ENST00000592234 ZNF622Q969S3 477 aaKnown RBP eCLIP24.33■■□□□ 1.49
CIRBP-237ENST00000592234 LAMB4A4D0S4 1761 aa24.33■■□□□ 1.49
CIRBP-237ENST00000592234 TNRC6CQ9HCJ0 1690 aaKnown RBP24.33■■□□□ 1.49
CIRBP-237ENST00000592234 LMNB1P20700 586 aa24.31■■□□□ 1.48
CIRBP-237ENST00000592234 ST5P78524 1137 aa24.31■■□□□ 1.48
CIRBP-237ENST00000592234 C16orf71Q8IYS4 520 aaPredicted RBP24.31■■□□□ 1.48
CIRBP-237ENST00000592234 MIS18AQ9NYP9 233 aa24.31■■□□□ 1.48
CIRBP-237ENST00000592234 KDM3BQ7LBC6 1761 aa24.31■■□□□ 1.48
CIRBP-237ENST00000592234 CLEC4GQ6UXB4 293 aa24.3■■□□□ 1.48
CIRBP-237ENST00000592234 ZNF652Q9Y2D9 606 aa24.3■■□□□ 1.48
CIRBP-237ENST00000592234 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
CIRBP-237ENST00000592234 PLEKHF1Q96S99 279 aa24.29■■□□□ 1.48
CIRBP-237ENST00000592234 PNNQ9H307 717 aaKnown RBP24.29■■□□□ 1.48
CIRBP-237ENST00000592234 ZC3H4Q9UPT8 1303 aaKnown RBP24.29■■□□□ 1.48
CIRBP-237ENST00000592234 FER1L6Q2WGJ9 1857 aa24.28■■□□□ 1.48
CIRBP-237ENST00000592234 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms