RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
SMAD4-214ENST00000592186 RC3H1Q5TC82 1133 aaKnown RBP13.7□□□□□ -0.22
SMAD4-214ENST00000592186 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
SMAD4-214ENST00000592186 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
SMAD4-214ENST00000592186 CAMKK2Q96RR4 588 aa13.7□□□□□ -0.22
SMAD4-214ENST00000592186 BTAF1O14981 1849 aa13.7□□□□□ -0.22
SMAD4-214ENST00000592186 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
SMAD4-214ENST00000592186 ITPK1Q13572 414 aa13.69□□□□□ -0.22
SMAD4-214ENST00000592186 PROM2Q8N271 834 aa13.69□□□□□ -0.22
SMAD4-214ENST00000592186 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
SMAD4-214ENST00000592186 PRAMEF22A3QJZ6 481 aa13.68□□□□□ -0.22
SMAD4-214ENST00000592186 NPM2Q86SE8 214 aaKnown RBP13.68□□□□□ -0.22
SMAD4-214ENST00000592186 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMAD4-214ENST00000592186 CCDC87Q9NVE4 849 aa13.68□□□□□ -0.22
SMAD4-214ENST00000592186 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
SMAD4-214ENST00000592186 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
SMAD4-214ENST00000592186 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
SMAD4-214ENST00000592186 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
SMAD4-214ENST00000592186 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
SMAD4-214ENST00000592186 A1BGP04217 495 aa13.66□□□□□ -0.22
SMAD4-214ENST00000592186 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
SMAD4-214ENST00000592186 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
SMAD4-214ENST00000592186 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
SMAD4-214ENST00000592186 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
SMAD4-214ENST00000592186 EZH2Q15910 746 aaKnown RBP13.66□□□□□ -0.22
SMAD4-214ENST00000592186 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
SMAD4-214ENST00000592186 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
SMAD4-214ENST00000592186 KCNQ4P56696 695 aa13.65□□□□□ -0.22
SMAD4-214ENST00000592186 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
SMAD4-214ENST00000592186 DEFB132Q7Z7B7 95 aa13.65□□□□□ -0.22
SMAD4-214ENST00000592186 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
SMAD4-214ENST00000592186 LY75O60449 1722 aa13.65□□□□□ -0.22
SMAD4-214ENST00000592186 TNS1Q9HBL0 1735 aaKnown RBP13.65□□□□□ -0.22
SMAD4-214ENST00000592186 A0A087WZG4 1122 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
SMAD4-214ENST00000592186 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 NBPF14Q5TI25 921 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 SSH1Q8WYL5 1049 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 AK7Q96M32 723 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 SMC4Q9NTJ3 1288 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 RTCBQ9Y3I0 505 aaKnown RBP13.64□□□□□ -0.23
SMAD4-214ENST00000592186 RGPD3A6NKT7 1758 aaPredicted RBP13.64□□□□□ -0.23
SMAD4-214ENST00000592186 RGPD4Q7Z3J3 1758 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 CICQ96RK0 1608 aaPredicted RBP13.64□□□□□ -0.23
SMAD4-214ENST00000592186 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
SMAD4-214ENST00000592186 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
SMAD4-214ENST00000592186 PDIA6Q15084 440 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 FLAD1Q8NFF5 587 aa13.64□□□□□ -0.23
SMAD4-214ENST00000592186 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
SMAD4-214ENST00000592186 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
SMAD4-214ENST00000592186 MYL6BP14649 208 aa13.63□□□□□ -0.23
SMAD4-214ENST00000592186 NBPF10Q6P3W6 841 aaKnown RBP13.63□□□□□ -0.23
SMAD4-214ENST00000592186 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
SMAD4-214ENST00000592186 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
SMAD4-214ENST00000592186 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.63□□□□□ -0.23
SMAD4-214ENST00000592186 ARHGAP45Q92619 1136 aa13.63□□□□□ -0.23
SMAD4-214ENST00000592186 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
SMAD4-214ENST00000592186 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
SMAD4-214ENST00000592186 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
SMAD4-214ENST00000592186 GNPATO15228 680 aa13.62□□□□□ -0.23
SMAD4-214ENST00000592186 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
SMAD4-214ENST00000592186 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
SMAD4-214ENST00000592186 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
SMAD4-214ENST00000592186 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
SMAD4-214ENST00000592186 PTPRCP08575 1304 aa13.61□□□□□ -0.23
SMAD4-214ENST00000592186 RGL2O15211 777 aa13.61□□□□□ -0.23
SMAD4-214ENST00000592186 BCAR3O75815 825 aa13.61□□□□□ -0.23
SMAD4-214ENST00000592186 MS4A1P11836 297 aa13.61□□□□□ -0.23
SMAD4-214ENST00000592186 SSFA2P28290 1259 aa13.61□□□□□ -0.23
SMAD4-214ENST00000592186 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
SMAD4-214ENST00000592186 C5P01031 1676 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 TJP1Q07157 1748 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 FLIIQ13045 1269 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 SLC15A2Q16348 729 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 KIF6Q6ZMV9 814 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 LRP10Q7Z4F1 713 aa13.6□□□□□ -0.23
SMAD4-214ENST00000592186 API5Q9BZZ5 524 aaKnown RBP13.6□□□□□ -0.23
SMAD4-214ENST00000592186 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
SMAD4-214ENST00000592186 RFC4P35249 363 aa13.59□□□□□ -0.23
SMAD4-214ENST00000592186 FKBP5Q13451 457 aaPredicted RBP13.59□□□□□ -0.23
SMAD4-214ENST00000592186 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
SMAD4-214ENST00000592186 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
SMAD4-214ENST00000592186 ARXQ96QS3 562 aa13.59□□□□□ -0.23
SMAD4-214ENST00000592186 BCL2L13Q9BXK5 485 aa13.59□□□□□ -0.23
SMAD4-214ENST00000592186 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
SMAD4-214ENST00000592186 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
SMAD4-214ENST00000592186 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
SMAD4-214ENST00000592186 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.24
SMAD4-214ENST00000592186 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
SMAD4-214ENST00000592186 ZPR1O75312 459 aa13.58□□□□□ -0.24
SMAD4-214ENST00000592186 ANXA1P04083 346 aa13.58□□□□□ -0.24
SMAD4-214ENST00000592186 PIP4K2AP48426 406 aaPredicted RBP13.58□□□□□ -0.24
SMAD4-214ENST00000592186 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
SMAD4-214ENST00000592186 ZKSCAN2Q63HK3 967 aa13.58□□□□□ -0.24
SMAD4-214ENST00000592186 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
SMAD4-214ENST00000592186 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
SMAD4-214ENST00000592186 FRAT1Q92837 279 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms