RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
POLR2E-208ENST00000591709 FER1L6Q2WGJ9 1857 aa23.3■■□□□ 1.32
POLR2E-208ENST00000591709 COL11A2P13942 1736 aaPredicted RBP23.28■■□□□ 1.32
POLR2E-208ENST00000591709 GLTPD2A6NH11 291 aa23.28■■□□□ 1.32
POLR2E-208ENST00000591709 VEGFAP15692 232 aaPredicted RBP23.28■■□□□ 1.32
POLR2E-208ENST00000591709 LMNB1P20700 586 aa23.28■■□□□ 1.32
POLR2E-208ENST00000591709 MTHFSP49914 203 aa23.28■■□□□ 1.32
POLR2E-208ENST00000591709 TM4SF1P30408 202 aa23.27■■□□□ 1.32
POLR2E-208ENST00000591709 C1orf141Q5JVX7 400 aa23.27■■□□□ 1.32
POLR2E-208ENST00000591709 USPL1Q5W0Q7 1092 aa23.27■■□□□ 1.32
POLR2E-208ENST00000591709 NFATC2IPQ8NCF5 419 aa23.27■■□□□ 1.32
POLR2E-208ENST00000591709 ZPR1O75312 459 aa23.26■■□□□ 1.31
POLR2E-208ENST00000591709 INTS5Q6P9B9 1019 aaKnown RBP23.26■■□□□ 1.31
POLR2E-208ENST00000591709 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
POLR2E-208ENST00000591709 AEBP1Q8IUX7 1158 aa23.25■■□□□ 1.31
POLR2E-208ENST00000591709 SOS1Q07889 1333 aaPredicted RBP23.24■■□□□ 1.31
POLR2E-208ENST00000591709 UBR2Q8IWV8 1755 aa23.23■■□□□ 1.31
POLR2E-208ENST00000591709 DNAJC10Q8IXB1 793 aa23.23■■□□□ 1.31
POLR2E-208ENST00000591709 CARMIL3Q8ND23 1372 aa23.23■■□□□ 1.31
POLR2E-208ENST00000591709 NFIXQ14938 502 aa23.22■■□□□ 1.31
POLR2E-208ENST00000591709 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
POLR2E-208ENST00000591709 COL15A1P39059 1388 aa23.22■■□□□ 1.31
POLR2E-208ENST00000591709 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
POLR2E-208ENST00000591709 ARFGEF2Q9Y6D5 1785 aa23.2■■□□□ 1.3
POLR2E-208ENST00000591709 MRC1P22897 1456 aa23.2■■□□□ 1.3
POLR2E-208ENST00000591709 NFKBIEO00221 500 aa23.2■■□□□ 1.3
POLR2E-208ENST00000591709 TTLL6Q8N841 843 aa23.2■■□□□ 1.3
POLR2E-208ENST00000591709 POTECB2RU33 542 aa23.18■■□□□ 1.3
POLR2E-208ENST00000591709 SERPINB2P05120 415 aa23.18■■□□□ 1.3
POLR2E-208ENST00000591709 C2CD5Q86YS7 1000 aa23.18■■□□□ 1.3
POLR2E-208ENST00000591709 NARFQ9UHQ1 456 aa23.18■■□□□ 1.3
POLR2E-208ENST00000591709 SLX4Q8IY92 1834 aa23.17■■□□□ 1.3
POLR2E-208ENST00000591709 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
POLR2E-208ENST00000591709 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
POLR2E-208ENST00000591709 SCN4AP35499 1836 aa23.15■■□□□ 1.3
POLR2E-208ENST00000591709 CYP19A1P11511 503 aaPredicted RBP23.15■■□□□ 1.3
POLR2E-208ENST00000591709 SULT6B1Q6IMI4 303 aa23.15■■□□□ 1.3
POLR2E-208ENST00000591709 BCL2L12Q9HB09 334 aa23.15■■□□□ 1.3
POLR2E-208ENST00000591709 DPY19L2Q6NUT2 758 aa23.14■■□□□ 1.29
POLR2E-208ENST00000591709 H0YIN7 160 aa23.13■■□□□ 1.29
POLR2E-208ENST00000591709 SLC39A6Q13433 755 aa23.13■■□□□ 1.29
POLR2E-208ENST00000591709 SLC52A2Q9HAB3 445 aa23.13■■□□□ 1.29
POLR2E-208ENST00000591709 BICDL1Q6ZP65 573 aa23.12■■□□□ 1.29
POLR2E-208ENST00000591709 CREBZFQ9NS37 354 aa23.12■■□□□ 1.29
POLR2E-208ENST00000591709 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
POLR2E-208ENST00000591709 POTEIP0CG38 1075 aa23.11■■□□□ 1.29
POLR2E-208ENST00000591709 POTEJP0CG39 1038 aa23.11■■□□□ 1.29
POLR2E-208ENST00000591709 ERFEQ4G0M1 354 aa23.11■■□□□ 1.29
POLR2E-208ENST00000591709 BCORQ6W2J9 1755 aa23.11■■□□□ 1.29
POLR2E-208ENST00000591709 FOXN1O15353 648 aa23.1■■□□□ 1.29
POLR2E-208ENST00000591709 AKAP4Q5JQC9 854 aa23.1■■□□□ 1.29
POLR2E-208ENST00000591709 CHADLQ6NUI6 762 aa23.1■■□□□ 1.29
POLR2E-208ENST00000591709 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
POLR2E-208ENST00000591709 C21orf2O43822 256 aa23.09■■□□□ 1.29
POLR2E-208ENST00000591709 ZNF622Q969S3 477 aaKnown RBP eCLIP23.09■■□□□ 1.29
POLR2E-208ENST00000591709 SIPA1L3O60292 1781 aaPredicted RBP23.08■■□□□ 1.29
POLR2E-208ENST00000591709 CNTNAP1P78357 1384 aa23.07■■□□□ 1.28
POLR2E-208ENST00000591709 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
POLR2E-208ENST00000591709 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
POLR2E-208ENST00000591709 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
POLR2E-208ENST00000591709 CCDC24Q8N4L8 307 aa23.06■■□□□ 1.28
POLR2E-208ENST00000591709 DDNO94850 711 aaPredicted RBP23.05■■□□□ 1.28
POLR2E-208ENST00000591709 MORC1Q86VD1 984 aa23.05■■□□□ 1.28
POLR2E-208ENST00000591709 PANK3Q9H999 370 aa23.05■■□□□ 1.28
POLR2E-208ENST00000591709 HSPA5P11021 654 aaKnown RBP23.04■■□□□ 1.28
POLR2E-208ENST00000591709 IL13P35225 146 aa23.04■■□□□ 1.28
POLR2E-208ENST00000591709 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
POLR2E-208ENST00000591709 TAOK3Q9H2K8 898 aa23.04■■□□□ 1.28
POLR2E-208ENST00000591709 ADAMTSL1Q8N6G6 1762 aa23.03■■□□□ 1.28
POLR2E-208ENST00000591709 LTBP3Q9NS15 1303 aa23.03■■□□□ 1.28
POLR2E-208ENST00000591709 PDE6BP35913 854 aa23.02■■□□□ 1.28
POLR2E-208ENST00000591709 PRR5LQ6MZQ0 368 aa23.02■■□□□ 1.28
POLR2E-208ENST00000591709 PRDM10Q9NQV6 1147 aa23.02■■□□□ 1.28
POLR2E-208ENST00000591709 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
POLR2E-208ENST00000591709 BRIP1Q9BX63 1249 aa23.01■■□□□ 1.27
POLR2E-208ENST00000591709 PASKQ96RG2 1323 aa23.01■■□□□ 1.27
POLR2E-208ENST00000591709 EIF5P55010 431 aaKnown RBP23■■□□□ 1.27
POLR2E-208ENST00000591709 AIDAQ96BJ3 306 aa23■■□□□ 1.27
POLR2E-208ENST00000591709 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
POLR2E-208ENST00000591709 ZNF330Q9Y3S2 320 aaPredicted RBP23■■□□□ 1.27
POLR2E-208ENST00000591709 HMOX1P09601 288 aa22.99■■□□□ 1.27
POLR2E-208ENST00000591709 CTCFP49711 727 aaPredicted RBP22.99■■□□□ 1.27
POLR2E-208ENST00000591709 A0A087WZG4 1122 aa22.98■■□□□ 1.27
POLR2E-208ENST00000591709 LDHDQ86WU2 507 aa22.98■■□□□ 1.27
POLR2E-208ENST00000591709 IQCA1LA6NCM1 817 aa22.97■■□□□ 1.27
POLR2E-208ENST00000591709 STARD3NLO95772 234 aa22.97■■□□□ 1.27
POLR2E-208ENST00000591709 VEGFBP49765 207 aa22.97■■□□□ 1.27
POLR2E-208ENST00000591709 PRPF40BQ6NWY9 871 aaKnown RBP22.97■■□□□ 1.27
POLR2E-208ENST00000591709 TBC1D2BQ9UPU7 963 aa22.97■■□□□ 1.27
POLR2E-208ENST00000591709 NPHP1O15259 732 aa22.96■■□□□ 1.27
POLR2E-208ENST00000591709 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
POLR2E-208ENST00000591709 SLC34A2O95436 690 aa22.95■■□□□ 1.26
POLR2E-208ENST00000591709 LBX1P52954 281 aa22.95■■□□□ 1.26
POLR2E-208ENST00000591709 MTHFSDQ2M296 383 aaKnown RBP22.95■■□□□ 1.26
POLR2E-208ENST00000591709 CNBD1Q8NA66 436 aa22.95■■□□□ 1.26
POLR2E-208ENST00000591709 CNKSR1Q969H4 720 aa22.95■■□□□ 1.26
POLR2E-208ENST00000591709 TAF1DQ9H5J8 278 aaPredicted RBP22.95■■□□□ 1.26
POLR2E-208ENST00000591709 TRPM7Q96QT4 1865 aa22.94■■□□□ 1.26
POLR2E-208ENST00000591709 TMEM88BA6NKF7 163 aa22.94■■□□□ 1.26
POLR2E-208ENST00000591709 EAPPQ56P03 285 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms