RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 SMC1BQ8NDV3 1235 aa13.54□□□□□ -0.24
RETREG3-211ENST00000591547 SCN11AQ9UI33 1791 aa13.53□□□□□ -0.24
RETREG3-211ENST00000591547 DLEC1Q9Y238 1755 aa13.52□□□□□ -0.25
RETREG3-211ENST00000591547 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
RETREG3-211ENST00000591547 POTECB2RU33 542 aa13.51□□□□□ -0.25
RETREG3-211ENST00000591547 SLC39A6Q13433 755 aa13.51□□□□□ -0.25
RETREG3-211ENST00000591547 NFIXQ14938 502 aa13.51□□□□□ -0.25
RETREG3-211ENST00000591547 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
RETREG3-211ENST00000591547 NRXN2Q9P2S2 1712 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-211ENST00000591547 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 ZPR1O75312 459 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 C1orf141Q5JVX7 400 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
RETREG3-211ENST00000591547 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-211ENST00000591547 NFKBIEO00221 500 aa13.49□□□□□ -0.25
RETREG3-211ENST00000591547 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-211ENST00000591547 LMNB1P20700 586 aa13.49□□□□□ -0.25
RETREG3-211ENST00000591547 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
RETREG3-211ENST00000591547 SERPINB2P05120 415 aa13.48□□□□□ -0.25
RETREG3-211ENST00000591547 CYP19A1P11511 503 aaPredicted RBP13.48□□□□□ -0.25
RETREG3-211ENST00000591547 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
RETREG3-211ENST00000591547 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
RETREG3-211ENST00000591547 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
RETREG3-211ENST00000591547 ANKRD31Q8N7Z5 1873 aa13.47□□□□□ -0.25
RETREG3-211ENST00000591547 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
RETREG3-211ENST00000591547 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
RETREG3-211ENST00000591547 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
RETREG3-211ENST00000591547 PANK3Q9H999 370 aa13.47□□□□□ -0.25
RETREG3-211ENST00000591547 NARFQ9UHQ1 456 aa13.47□□□□□ -0.25
RETREG3-211ENST00000591547 COL15A1P39059 1388 aa13.46□□□□□ -0.25
RETREG3-211ENST00000591547 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
RETREG3-211ENST00000591547 CACNA1SQ13698 1873 aa13.46□□□□□ -0.26
RETREG3-211ENST00000591547 COL11A2P13942 1736 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-211ENST00000591547 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
RETREG3-211ENST00000591547 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
RETREG3-211ENST00000591547 ZC3H4Q9UPT8 1303 aaKnown RBP13.44□□□□□ -0.26
RETREG3-211ENST00000591547 C21orf2O43822 256 aa13.44□□□□□ -0.26
RETREG3-211ENST00000591547 IL13P35225 146 aa13.44□□□□□ -0.26
RETREG3-211ENST00000591547 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
RETREG3-211ENST00000591547 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.26
RETREG3-211ENST00000591547 DICER1Q9UPY3 1922 aaKnown RBP13.44□□□□□ -0.26
RETREG3-211ENST00000591547 H0YIN7 160 aa13.43□□□□□ -0.26
RETREG3-211ENST00000591547 RNMTO43148 476 aaKnown RBP13.43□□□□□ -0.26
RETREG3-211ENST00000591547 FER1L6Q2WGJ9 1857 aa13.43□□□□□ -0.26
RETREG3-211ENST00000591547 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
RETREG3-211ENST00000591547 HMOX1P09601 288 aa13.42□□□□□ -0.26
RETREG3-211ENST00000591547 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
RETREG3-211ENST00000591547 FOXN1O15353 648 aa13.41□□□□□ -0.26
RETREG3-211ENST00000591547 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-211ENST00000591547 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
RETREG3-211ENST00000591547 MRC1P22897 1456 aa13.41□□□□□ -0.26
RETREG3-211ENST00000591547 SLX4Q8IY92 1834 aa13.41□□□□□ -0.26
RETREG3-211ENST00000591547 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
RETREG3-211ENST00000591547 MTHFSDQ2M296 383 aaKnown RBP13.4□□□□□ -0.26
RETREG3-211ENST00000591547 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
RETREG3-211ENST00000591547 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
RETREG3-211ENST00000591547 PRR5LQ6MZQ0 368 aa13.39□□□□□ -0.27
RETREG3-211ENST00000591547 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
RETREG3-211ENST00000591547 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
RETREG3-211ENST00000591547 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-211ENST00000591547 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
RETREG3-211ENST00000591547 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
RETREG3-211ENST00000591547 SCN7AQ01118 1682 aa13.37□□□□□ -0.27
RETREG3-211ENST00000591547 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
RETREG3-211ENST00000591547 CNTNAP1P78357 1384 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 A1BGP04217 495 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 PDE6BP35913 854 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 PIP4K2AP48426 406 aaPredicted RBP13.35□□□□□ -0.27
RETREG3-211ENST00000591547 VEGFBP49765 207 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
RETREG3-211ENST00000591547 TAOK3Q9H2K8 898 aa13.35□□□□□ -0.27
RETREG3-211ENST00000591547 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-211ENST00000591547 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
RETREG3-211ENST00000591547 ARFGEF2Q9Y6D5 1785 aa13.34□□□□□ -0.27
RETREG3-211ENST00000591547 PASKQ96RG2 1323 aa13.34□□□□□ -0.27
RETREG3-211ENST00000591547 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-211ENST00000591547 A0A087WZG4 1122 aa13.33□□□□□ -0.28
RETREG3-211ENST00000591547 KCNQ3O43525 872 aa13.33□□□□□ -0.28
RETREG3-211ENST00000591547 STARD3NLO95772 234 aa13.33□□□□□ -0.28
RETREG3-211ENST00000591547 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-211ENST00000591547 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
RETREG3-211ENST00000591547 TAF1DQ9H5J8 278 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-211ENST00000591547 ZNF541Q9H0D2 1346 aa13.33□□□□□ -0.28
RETREG3-211ENST00000591547 CAMTA2O94983 1202 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-211ENST00000591547 SRGNP10124 158 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 LBX1P52954 281 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
RETREG3-211ENST00000591547 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-211ENST00000591547 IL17REQ8NFR9 667 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 LTBP3Q9NS15 1303 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
RETREG3-211ENST00000591547 SCN4AP35499 1836 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms