RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 ZNF790Q6PG37 636 aa25.17■■□□□ 1.62
GCDH-214ENST00000591043 LRRFIP2Q9Y608 721 aaKnown RBP25.17■■□□□ 1.62
GCDH-214ENST00000591043 RAB11FIP3O75154 756 aa25.16■■□□□ 1.62
GCDH-214ENST00000591043 GSPT1P15170 499 aaKnown RBP25.16■■□□□ 1.62
GCDH-214ENST00000591043 DDX21Q9NR30 783 aaKnown RBP eCLIP25.16■■□□□ 1.62
GCDH-214ENST00000591043 WDR17Q8IZU2 1322 aa25.16■■□□□ 1.62
GCDH-214ENST00000591043 PI4KAP2A4QPH2 592 aa25.16■■□□□ 1.62
GCDH-214ENST00000591043 KSR2Q6VAB6 950 aa25.16■■□□□ 1.62
GCDH-214ENST00000591043 PI4KAP1Q8N8J0 262 aa25.16■■□□□ 1.62
GCDH-214ENST00000591043 SSH3Q8TE77 659 aa25.16■■□□□ 1.62
GCDH-214ENST00000591043 CHRNA2Q15822 529 aa25.15■■□□□ 1.62
GCDH-214ENST00000591043 ADCY9O60503 1353 aa25.14■■□□□ 1.62
GCDH-214ENST00000591043 TOM1O60784 492 aa25.14■■□□□ 1.62
GCDH-214ENST00000591043 PRDM11Q9NQV5 511 aa25.14■■□□□ 1.62
GCDH-214ENST00000591043 HSP90AB4PQ58FF6 505 aa25.13■■□□□ 1.61
GCDH-214ENST00000591043 TBC1D2Q9BYX2 928 aa25.13■■□□□ 1.61
GCDH-214ENST00000591043 AOX1Q06278 1338 aa25.13■■□□□ 1.61
GCDH-214ENST00000591043 C5P01031 1676 aa25.13■■□□□ 1.61
GCDH-214ENST00000591043 POLA2Q14181 598 aa25.12■■□□□ 1.61
GCDH-214ENST00000591043 SNX21Q969T3 373 aa25.12■■□□□ 1.61
GCDH-214ENST00000591043 LAMB4A4D0S4 1761 aa25.12■■□□□ 1.61
GCDH-214ENST00000591043 C16orf71Q8IYS4 520 aaPredicted RBP25.11■■□□□ 1.61
GCDH-214ENST00000591043 TUBGCP6Q96RT7 1819 aa25.11■■□□□ 1.61
GCDH-214ENST00000591043 COL5A2P05997 1499 aaPredicted RBP25.11■■□□□ 1.61
GCDH-214ENST00000591043 PNMA6EA0A0J9YXQ4 647 aa25.1■■□□□ 1.61
GCDH-214ENST00000591043 HSCBQ8IWL3 235 aa25.1■■□□□ 1.61
GCDH-214ENST00000591043 TTC5Q8N0Z6 440 aa25.1■■□□□ 1.61
GCDH-214ENST00000591043 PCDH11XQ9BZA7 1347 aa25.1■■□□□ 1.61
GCDH-214ENST00000591043 PCDH11YQ9BZA8 1340 aa25.1■■□□□ 1.61
GCDH-214ENST00000591043 SMARCA5O60264 1052 aaPredicted RBP25.1■■□□□ 1.61
GCDH-214ENST00000591043 PDE1AP54750 535 aa25.1■■□□□ 1.61
GCDH-214ENST00000591043 MTX1Q13505 466 aa25.09■■□□□ 1.61
GCDH-214ENST00000591043 EXOC6BQ9Y2D4 811 aa25.09■■□□□ 1.61
GCDH-214ENST00000591043 SALL3Q9BXA9 1300 aa25.08■■□□□ 1.61
GCDH-214ENST00000591043 CYP27B1O15528 508 aa25.08■■□□□ 1.61
GCDH-214ENST00000591043 NFATC2IPQ8NCF5 419 aa25.08■■□□□ 1.61
GCDH-214ENST00000591043 LINS1Q8NG48 757 aa25.08■■□□□ 1.61
GCDH-214ENST00000591043 STAP2Q9UGK3 403 aa25.08■■□□□ 1.61
GCDH-214ENST00000591043 MAP3K2Q9Y2U5 619 aa25.08■■□□□ 1.61
GCDH-214ENST00000591043 APBB1O00213 710 aa25.08■■□□□ 1.6
GCDH-214ENST00000591043 SNRPA1P09661 255 aaKnown RBP25.08■■□□□ 1.6
GCDH-214ENST00000591043 SDSP20132 328 aa25.08■■□□□ 1.6
GCDH-214ENST00000591043 FMNL2Q96PY5 1086 aa25.08■■□□□ 1.6
GCDH-214ENST00000591043 CARD10Q9BWT7 1032 aa25.07■■□□□ 1.6
GCDH-214ENST00000591043 PPP1R42Q7Z4L9 355 aa25.06■■□□□ 1.6
GCDH-214ENST00000591043 REC8O95072 547 aa25.05■■□□□ 1.6
GCDH-214ENST00000591043 MX1P20591 662 aa25.05■■□□□ 1.6
GCDH-214ENST00000591043 CABP4P57796 275 aa25.05■■□□□ 1.6
GCDH-214ENST00000591043 NFKBIBQ15653 356 aa25.05■■□□□ 1.6
GCDH-214ENST00000591043 TOM1L2Q6ZVM7 507 aa25.05■■□□□ 1.6
GCDH-214ENST00000591043 OTUD7AQ8TE49 926 aaPredicted RBP25.05■■□□□ 1.6
GCDH-214ENST00000591043 UTYO14607 1347 aa25.05■■□□□ 1.6
GCDH-214ENST00000591043 LARP1Q6PKG0 1096 aaKnown RBP25.05■■□□□ 1.6
GCDH-214ENST00000591043 C9orf78Q9NZ63 289 aaPredicted RBP25.05■■□□□ 1.6
GCDH-214ENST00000591043 ERBB4Q15303 1308 aa25.04■■□□□ 1.6
GCDH-214ENST00000591043 ZCRB1Q8TBF4 217 aaKnown RBP25.04■■□□□ 1.6
GCDH-214ENST00000591043 KIF1BPQ96EK5 621 aa25.04■■□□□ 1.6
GCDH-214ENST00000591043 ERVV-2B6SEH9 535 aa25.03■■□□□ 1.6
GCDH-214ENST00000591043 SRGAP3O43295 1099 aa25.03■■□□□ 1.6
GCDH-214ENST00000591043 PDIA6Q15084 440 aa25.03■■□□□ 1.6
GCDH-214ENST00000591043 ANXA1P04083 346 aa25.03■■□□□ 1.6
GCDH-214ENST00000591043 NBPF7P0C2Y1 421 aaPredicted RBP25.03■■□□□ 1.6
GCDH-214ENST00000591043 NEXNQ0ZGT2 675 aa25.03■■□□□ 1.6
GCDH-214ENST00000591043 PROSER3Q2NL68 480 aa25.03■■□□□ 1.6
GCDH-214ENST00000591043 UBR2Q8IWV8 1755 aa25.02■■□□□ 1.6
GCDH-214ENST00000591043 IL2RBP14784 551 aa25.02■■□□□ 1.6
GCDH-214ENST00000591043 NKX1-1Q15270 411 aaPredicted RBP25.02■■□□□ 1.6
GCDH-214ENST00000591043 ANTXR1Q9H6X2 564 aa25.02■■□□□ 1.6
GCDH-214ENST00000591043 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
GCDH-214ENST00000591043 SURF6O75683 361 aaKnown RBP25.01■■□□□ 1.59
GCDH-214ENST00000591043 SLC39A6Q13433 755 aa25.01■■□□□ 1.59
GCDH-214ENST00000591043 ZNF496Q96IT1 587 aaPredicted RBP25.01■■□□□ 1.59
GCDH-214ENST00000591043 ERC1Q8IUD2 1116 aa25■■□□□ 1.59
GCDH-214ENST00000591043 PRAMEF22A3QJZ6 481 aa25■■□□□ 1.59
GCDH-214ENST00000591043 GRM8O00222 908 aa25■■□□□ 1.59
GCDH-214ENST00000591043 SHANK3Q9BYB0 1731 aa25■■□□□ 1.59
GCDH-214ENST00000591043 ERC2O15083 957 aa24.99■■□□□ 1.59
GCDH-214ENST00000591043 RIC3Q7Z5B4 369 aa24.99■■□□□ 1.59
GCDH-214ENST00000591043 RABEP1Q15276 862 aa24.98■■□□□ 1.59
GCDH-214ENST00000591043 RHPN1Q8TCX5 695 aa24.98■■□□□ 1.59
GCDH-214ENST00000591043 BCL11AQ9H165 835 aa24.98■■□□□ 1.59
GCDH-214ENST00000591043 AK9Q5TCS8 1911 aa24.98■■□□□ 1.59
GCDH-214ENST00000591043 EPB41L2O43491 1005 aaKnown RBP24.98■■□□□ 1.59
GCDH-214ENST00000591043 KIF2CQ99661 725 aa24.98■■□□□ 1.59
GCDH-214ENST00000591043 USP26Q9BXU7 913 aa24.98■■□□□ 1.59
GCDH-214ENST00000591043 GLI3P10071 1580 aa24.97■■□□□ 1.59
GCDH-214ENST00000591043 EVA1CP58658 441 aa24.97■■□□□ 1.59
GCDH-214ENST00000591043 COL14A1Q05707 1796 aaKnown RBP24.97■■□□□ 1.59
GCDH-214ENST00000591043 IL27Q8NEV9 243 aa24.96■■□□□ 1.59
GCDH-214ENST00000591043 METTL22Q9BUU2 404 aaPredicted RBP24.96■■□□□ 1.59
GCDH-214ENST00000591043 CHMP5Q9NZZ3 219 aa24.96■■□□□ 1.59
GCDH-214ENST00000591043 SLKQ9H2G2 1235 aaPredicted RBP24.95■■□□□ 1.59
GCDH-214ENST00000591043 ARFGEF2Q9Y6D5 1785 aa24.95■■□□□ 1.59
GCDH-214ENST00000591043 USP42Q9H9J4 1324 aaKnown RBP24.95■■□□□ 1.58
GCDH-214ENST00000591043 COL22A1Q8NFW1 1626 aaPredicted RBP24.94■■□□□ 1.58
GCDH-214ENST00000591043 COL15A1P39059 1388 aa24.94■■□□□ 1.58
GCDH-214ENST00000591043 AFDNP55196 1824 aaKnown RBP24.94■■□□□ 1.58
GCDH-214ENST00000591043 XAGE3Q8WTP9 111 aa24.94■■□□□ 1.58
GCDH-214ENST00000591043 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
GCDH-214ENST00000591043 AIMP1Q12904 312 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms