RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
GCDH-213ENST00000590627 CICQ96RK0 1608 aaPredicted RBP21.66■■□□□ 1.06
GCDH-213ENST00000590627 TGFB2P61812 414 aa21.66■■□□□ 1.06
GCDH-213ENST00000590627 RTF1Q92541 710 aaKnown RBP21.66■■□□□ 1.06
GCDH-213ENST00000590627 MYH14Q7Z406 1995 aaKnown RBP21.66■■□□□ 1.06
GCDH-213ENST00000590627 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
GCDH-213ENST00000590627 PXDNLA1KZ92 1463 aa21.65■■□□□ 1.06
GCDH-213ENST00000590627 RFC4P35249 363 aa21.65■■□□□ 1.06
GCDH-213ENST00000590627 KIAA1551Q9HCM1 1747 aa21.65■■□□□ 1.06
GCDH-213ENST00000590627 C10orf71Q711Q0 1435 aa21.64■■□□□ 1.06
GCDH-213ENST00000590627 SCN11AQ9UI33 1791 aa21.64■■□□□ 1.06
GCDH-213ENST00000590627 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.06
GCDH-213ENST00000590627 IL16Q14005 1332 aa21.64■■□□□ 1.05
GCDH-213ENST00000590627 GYS1P13807 737 aa21.64■■□□□ 1.05
GCDH-213ENST00000590627 CALD1Q05682 793 aaKnown RBP21.64■■□□□ 1.05
GCDH-213ENST00000590627 NFATC2IPQ8NCF5 419 aa21.64■■□□□ 1.05
GCDH-213ENST00000590627 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
GCDH-213ENST00000590627 WWC3Q9ULE0 1092 aa21.64■■□□□ 1.05
GCDH-213ENST00000590627 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
GCDH-213ENST00000590627 PTCD1O75127 700 aaKnown RBP21.63■■□□□ 1.05
GCDH-213ENST00000590627 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
GCDH-213ENST00000590627 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
GCDH-213ENST00000590627 MCM10Q7L590 875 aa21.62■■□□□ 1.05
GCDH-213ENST00000590627 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
GCDH-213ENST00000590627 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
GCDH-213ENST00000590627 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
GCDH-213ENST00000590627 THUMPD2Q9BTF0 503 aaKnown RBP21.61■■□□□ 1.05
GCDH-213ENST00000590627 PARP3Q9Y6F1 533 aa21.61■■□□□ 1.05
GCDH-213ENST00000590627 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
GCDH-213ENST00000590627 TJP1Q07157 1748 aa21.6■■□□□ 1.05
GCDH-213ENST00000590627 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
GCDH-213ENST00000590627 LGR6Q9HBX8 967 aa21.6■■□□□ 1.05
GCDH-213ENST00000590627 CEP350Q5VT06 3117 aa21.6■■□□□ 1.05
GCDH-213ENST00000590627 E9PSI1 815 aa21.58■■□□□ 1.05
GCDH-213ENST00000590627 ZNF853P0CG23 659 aa21.58■■□□□ 1.05
GCDH-213ENST00000590627 SLFN5Q08AF3 891 aa21.58■■□□□ 1.05
GCDH-213ENST00000590627 TRMT2AQ8IZ69 625 aaKnown RBP21.58■■□□□ 1.05
GCDH-213ENST00000590627 SLC52A2Q9HAB3 445 aa21.58■■□□□ 1.05
GCDH-213ENST00000590627 IFT57Q9NWB7 429 aa21.58■■□□□ 1.05
GCDH-213ENST00000590627 A0A0G2JLW4 131 aa21.57■■□□□ 1.04
GCDH-213ENST00000590627 ZNF526Q8TF50 670 aaPredicted RBP21.57■■□□□ 1.04
GCDH-213ENST00000590627 BCS1LQ9Y276 419 aa21.57■■□□□ 1.04
GCDH-213ENST00000590627 BRCA1P38398 1863 aaKnown RBP21.57■■□□□ 1.04
GCDH-213ENST00000590627 MRC1P22897 1456 aa21.57■■□□□ 1.04
GCDH-213ENST00000590627 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
GCDH-213ENST00000590627 CDCA7LQ96GN5 454 aa21.56■■□□□ 1.04
GCDH-213ENST00000590627 CFAP44Q96MT7 982 aa21.56■■□□□ 1.04
GCDH-213ENST00000590627 SPINK5Q9NQ38 1064 aaPredicted RBP21.56■■□□□ 1.04
GCDH-213ENST00000590627 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
GCDH-213ENST00000590627 DPEP1P16444 411 aa21.55■■□□□ 1.04
GCDH-213ENST00000590627 GNAI1P63096 354 aa21.55■■□□□ 1.04
GCDH-213ENST00000590627 CHL1O00533 1208 aa21.54■■□□□ 1.04
GCDH-213ENST00000590627 TAF7Q15545 349 aaPredicted RBP21.54■■□□□ 1.04
GCDH-213ENST00000590627 VIRMAQ69YN4 1812 aaKnown RBP21.54■■□□□ 1.04
GCDH-213ENST00000590627 TEFQ10587 303 aa21.53■■□□□ 1.04
GCDH-213ENST00000590627 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
GCDH-213ENST00000590627 MYH16Q9H6N6 1097 aa21.53■■□□□ 1.04
GCDH-213ENST00000590627 SRP68Q9UHB9 627 aaKnown RBP21.53■■□□□ 1.04
GCDH-213ENST00000590627 KCNA3P22001 575 aa21.52■■□□□ 1.04
GCDH-213ENST00000590627 FKBP8Q14318 412 aa21.52■■□□□ 1.04
GCDH-213ENST00000590627 ARFGEF1Q9Y6D6 1849 aa21.52■■□□□ 1.04
GCDH-213ENST00000590627 HSPA6P17066 643 aa21.51■■□□□ 1.03
GCDH-213ENST00000590627 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
GCDH-213ENST00000590627 DNAJC10Q8IXB1 793 aa21.51■■□□□ 1.03
GCDH-213ENST00000590627 KIF3CO14782 793 aa21.5■■□□□ 1.03
GCDH-213ENST00000590627 DDR1Q08345 913 aa21.5■■□□□ 1.03
GCDH-213ENST00000590627 ARHGAP27Q6ZUM4 889 aa21.5■■□□□ 1.03
GCDH-213ENST00000590627 PIM2Q9P1W9 311 aa21.5■■□□□ 1.03
GCDH-213ENST00000590627 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
GCDH-213ENST00000590627 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
GCDH-213ENST00000590627 ZPR1O75312 459 aa21.49■■□□□ 1.03
GCDH-213ENST00000590627 CYP19A1P11511 503 aaPredicted RBP21.49■■□□□ 1.03
GCDH-213ENST00000590627 TM4SF1P30408 202 aa21.49■■□□□ 1.03
GCDH-213ENST00000590627 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
GCDH-213ENST00000590627 FANCIQ9NVI1 1328 aa21.49■■□□□ 1.03
GCDH-213ENST00000590627 SIPA1L3O60292 1781 aaPredicted RBP21.48■■□□□ 1.03
GCDH-213ENST00000590627 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
GCDH-213ENST00000590627 VSIG10Q8N0Z9 540 aa21.48■■□□□ 1.03
GCDH-213ENST00000590627 LAS1LQ9Y4W2 734 aaKnown RBP21.48■■□□□ 1.03
GCDH-213ENST00000590627 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
GCDH-213ENST00000590627 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
GCDH-213ENST00000590627 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
GCDH-213ENST00000590627 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
GCDH-213ENST00000590627 DALRD3Q5D0E6 543 aaKnown RBP21.46■■□□□ 1.03
GCDH-213ENST00000590627 USPL1Q5W0Q7 1092 aa21.46■■□□□ 1.03
GCDH-213ENST00000590627 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
GCDH-213ENST00000590627 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
GCDH-213ENST00000590627 NARFQ9UHQ1 456 aa21.45■■□□□ 1.02
GCDH-213ENST00000590627 COL15A1P39059 1388 aa21.45■■□□□ 1.02
GCDH-213ENST00000590627 ZBTB1Q9Y2K1 713 aa21.44■■□□□ 1.02
GCDH-213ENST00000590627 TOMM70O94826 608 aa21.43■■□□□ 1.02
GCDH-213ENST00000590627 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
GCDH-213ENST00000590627 ZNF790Q6PG37 636 aa21.42■■□□□ 1.02
GCDH-213ENST00000590627 KDM3BQ7LBC6 1761 aa21.42■■□□□ 1.02
GCDH-213ENST00000590627 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
GCDH-213ENST00000590627 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
GCDH-213ENST00000590627 CHRNA5P30532 468 aa21.41■■□□□ 1.02
GCDH-213ENST00000590627 NFIXQ14938 502 aa21.41■■□□□ 1.02
GCDH-213ENST00000590627 C9orf131Q5VYM1 1079 aa21.41■■□□□ 1.02
GCDH-213ENST00000590627 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms