RNA–Protein interactions for RNA: ENST00000590595.1

SEPT9-231, Transcript of septin 9, human

TSL 3

Gene SEPT9, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-231	ENST00000590595	CNGB1	Q14028	1251 aa	Predicted RBP	21.61	■■□□□ 1.05
SEPT9-231	ENST00000590595	BCL2L12	Q9HB09	334 aa		21.61	■■□□□ 1.05
SEPT9-231	ENST00000590595	SRP68	Q9UHB9	627 aa	Known RBP	21.61	■■□□□ 1.05
SEPT9-231	ENST00000590595	TM4SF1	P30408	202 aa		21.6	■■□□□ 1.05
SEPT9-231	ENST00000590595	EIF5	P55010	431 aa	Known RBP	21.6	■■□□□ 1.05
SEPT9-231	ENST00000590595	FKBP8	Q14318	412 aa		21.6	■■□□□ 1.05
SEPT9-231	ENST00000590595	ZNF784	Q8NCA9	323 aa	Predicted RBP	21.6	■■□□□ 1.05
SEPT9-231	ENST00000590595	RFC4	P35249	363 aa		21.59	■■□□□ 1.05
SEPT9-231	ENST00000590595	RALBP1	Q15311	655 aa		21.58	■■□□□ 1.05
SEPT9-231	ENST00000590595	GPR162	Q16538	588 aa		21.58	■■□□□ 1.05
SEPT9-231	ENST00000590595	NARF	Q9UHQ1	456 aa		21.58	■■□□□ 1.05
SEPT9-231	ENST00000590595	POLRMT	O00411	1230 aa	Known RBP	21.57	■■□□□ 1.04
SEPT9-231	ENST00000590595	KCNQ3	O43525	872 aa		21.57	■■□□□ 1.04
SEPT9-231	ENST00000590595	GRIN3B	O60391	1043 aa		21.57	■■□□□ 1.04
SEPT9-231	ENST00000590595	TEF	Q10587	303 aa		21.57	■■□□□ 1.04
SEPT9-231	ENST00000590595	KLHL34	Q8N239	644 aa		21.57	■■□□□ 1.04
SEPT9-231	ENST00000590595	COL11A2	P13942	1736 aa	Predicted RBP	21.56	■■□□□ 1.04
SEPT9-231	ENST00000590595	KCNA3	P22001	575 aa		21.56	■■□□□ 1.04
SEPT9-231	ENST00000590595	TGFB2	P61812	414 aa		21.56	■■□□□ 1.04
SEPT9-231	ENST00000590595	SBF1	O95248	1867 aa		21.55	■■□□□ 1.04
SEPT9-231	ENST00000590595	CEP350	Q5VT06	3117 aa		21.54	■■□□□ 1.04
SEPT9-231	ENST00000590595	ARFGEF2	Q9Y6D5	1785 aa		21.53	■■□□□ 1.04
SEPT9-231	ENST00000590595	MCM10	Q7L590	875 aa		21.53	■■□□□ 1.04
SEPT9-231	ENST00000590595	TTC5	Q8N0Z6	440 aa		21.53	■■□□□ 1.04
SEPT9-231	ENST00000590595	FMNL2	Q96PY5	1086 aa		21.53	■■□□□ 1.04
SEPT9-231	ENST00000590595	TEX13A	Q9BXU3	409 aa	Predicted RBP	21.53	■■□□□ 1.04
SEPT9-231	ENST00000590595	IL6ST	P40189	918 aa	Predicted RBP	21.52	■■□□□ 1.04
SEPT9-231	ENST00000590595	USPL1	Q5W0Q7	1092 aa		21.52	■■□□□ 1.04
SEPT9-231	ENST00000590595	STARD3NL	O95772	234 aa		21.51	■■□□□ 1.03
SEPT9-231	ENST00000590595	NFIX	Q14938	502 aa		21.51	■■□□□ 1.03
SEPT9-231	ENST00000590595	MYBBP1A	Q9BQG0	1328 aa	Known RBP	21.51	■■□□□ 1.03
SEPT9-231	ENST00000590595	BTBD11	A6QL63	1104 aa		21.5	■■□□□ 1.03
SEPT9-231	ENST00000590595	DCTN1	Q14203	1278 aa		21.5	■■□□□ 1.03
SEPT9-231	ENST00000590595	NFE2L2	Q16236	605 aa		21.5	■■□□□ 1.03
SEPT9-231	ENST00000590595	PARP3	Q9Y6F1	533 aa		21.49	■■□□□ 1.03
SEPT9-231	ENST00000590595	CARMIL3	Q8ND23	1372 aa		21.48	■■□□□ 1.03
SEPT9-231	ENST00000590595	PRAMEF22	A3QJZ6	481 aa		21.48	■■□□□ 1.03
SEPT9-231	ENST00000590595	RGL2	O15211	777 aa		21.48	■■□□□ 1.03
SEPT9-231	ENST00000590595	DDX10	Q13206	875 aa	Known RBP	21.48	■■□□□ 1.03
SEPT9-231	ENST00000590595	CAMTA2	O94983	1202 aa		21.47	■■□□□ 1.03
SEPT9-231	ENST00000590595	DPEP1	P16444	411 aa		21.47	■■□□□ 1.03
SEPT9-231	ENST00000590595	USP16	Q9Y5T5	823 aa		21.47	■■□□□ 1.03
SEPT9-231	ENST00000590595	NUP98	P52948	1817 aa		21.47	■■□□□ 1.03
SEPT9-231	ENST00000590595	ATP10D	Q9P241	1426 aa		21.46	■■□□□ 1.03
SEPT9-231	ENST00000590595	NBPF26	B4DH59	902 aa		21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	ZPR1	O75312	459 aa		21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	A1BG	P04217	495 aa		21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	TAF7	Q15545	349 aa	Predicted RBP	21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	NBPF10	Q6P3W6	841 aa	Known RBP	21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	NBPF15	Q8N660	670 aa		21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	RTF1	Q92541	710 aa	Known RBP	21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595	FER1L6	Q2WGJ9	1857 aa		21.45	■■□□□ 1.02
SEPT9-231	ENST00000590595		A0A087WZG4	1122 aa		21.44	■■□□□ 1.02
SEPT9-231	ENST00000590595		A0A0G2JLW4	131 aa		21.44	■■□□□ 1.02
SEPT9-231	ENST00000590595	SNRPA1	P09661	255 aa	Known RBP	21.44	■■□□□ 1.02
SEPT9-231	ENST00000590595	CANX	P27824	592 aa	Known RBP	21.44	■■□□□ 1.02
SEPT9-231	ENST00000590595	PRKRIP1	Q9H875	184 aa	Predicted RBP	21.44	■■□□□ 1.02
SEPT9-231	ENST00000590595	PELP1	Q8IZL8	1130 aa	Known RBP	21.43	■■□□□ 1.02
SEPT9-231	ENST00000590595	EIF4A1	P60842	406 aa	Known RBP	21.41	■■□□□ 1.02
SEPT9-231	ENST00000590595	TBC1D9B	Q66K14	1250 aa		21.41	■■□□□ 1.02
SEPT9-231	ENST00000590595	DICER1	Q9UPY3	1922 aa	Known RBP	21.41	■■□□□ 1.02
SEPT9-231	ENST00000590595	GIGYF1	O75420	1035 aa	Predicted RBP	21.4	■■□□□ 1.02
SEPT9-231	ENST00000590595	LRP10	Q7Z4F1	713 aa		21.4	■■□□□ 1.02
SEPT9-231	ENST00000590595	SERPINB2	P05120	415 aa		21.39	■■□□□ 1.01
SEPT9-231	ENST00000590595	PNISR	Q8TF01	805 aa	Known RBP	21.39	■■□□□ 1.01
SEPT9-231	ENST00000590595	THUMPD2	Q9BTF0	503 aa	Known RBP	21.39	■■□□□ 1.01
SEPT9-231	ENST00000590595	PNN	Q9H307	717 aa	Known RBP	21.39	■■□□□ 1.01
SEPT9-231	ENST00000590595	CCDC88A	Q3V6T2	1871 aa		21.39	■■□□□ 1.01
SEPT9-231	ENST00000590595	ANKRD36C	Q5JPF3	1778 aa		21.38	■■□□□ 1.01
SEPT9-231	ENST00000590595	TNRC6C	Q9HCJ0	1690 aa	Known RBP	21.38	■■□□□ 1.01
SEPT9-231	ENST00000590595	TMPO	P42166	694 aa	Known RBP	21.38	■■□□□ 1.01
SEPT9-231	ENST00000590595	BABAM1	Q9NWV8	329 aa		21.38	■■□□□ 1.01
SEPT9-231	ENST00000590595	CACNA1S	Q13698	1873 aa		21.37	■■□□□ 1.01
SEPT9-231	ENST00000590595	SLX4	Q8IY92	1834 aa		21.37	■■□□□ 1.01
SEPT9-231	ENST00000590595	CHRNA5	P30532	468 aa		21.37	■■□□□ 1.01
SEPT9-231	ENST00000590595	CLEC4G	Q6UXB4	293 aa		21.37	■■□□□ 1.01
SEPT9-231	ENST00000590595	TBC1D2B	Q9UPU7	963 aa		21.37	■■□□□ 1.01
SEPT9-231	ENST00000590595	TIAM2	Q8IVF5	1701 aa		21.36	■■□□□ 1.01
SEPT9-231	ENST00000590595	PRR5L	Q6MZQ0	368 aa		21.36	■■□□□ 1.01
SEPT9-231	ENST00000590595	MIS18A	Q9NYP9	233 aa		21.36	■■□□□ 1.01
SEPT9-231	ENST00000590595	PIM2	Q9P1W9	311 aa		21.36	■■□□□ 1.01
SEPT9-231	ENST00000590595	MAPK8IP3	Q9UPT6	1336 aa		21.35	■■□□□ 1.01
SEPT9-231	ENST00000590595	WWC3	Q9ULE0	1092 aa		21.35	■■□□□ 1.01
SEPT9-231	ENST00000590595	TRIM35	Q9UPQ4	493 aa		21.35	■■□□□ 1.01
SEPT9-231	ENST00000590595	BCS1L	Q9Y276	419 aa		21.35	■■□□□ 1.01
SEPT9-231	ENST00000590595	RIC1	Q4ADV7	1423 aa		21.35	■■□□□ 1.01
SEPT9-231	ENST00000590595	ERBB4	Q15303	1308 aa		21.34	■■□□□ 1.01
SEPT9-231	ENST00000590595	KLRG2	A4D1S0	409 aa	Predicted RBP	21.34	■■□□□ 1.01
SEPT9-231	ENST00000590595	PIP4K2A	P48426	406 aa	Predicted RBP	21.34	■■□□□ 1.01
SEPT9-231	ENST00000590595	DZIP3	Q86Y13	1208 aa	Known RBP	21.34	■■□□□ 1.01
SEPT9-231	ENST00000590595	IBTK	Q9P2D0	1353 aa	Predicted RBP	21.33	■■□□□ 1
SEPT9-231	ENST00000590595	SNED1	Q8TER0	1413 aa		21.32	■■□□□ 1
SEPT9-231	ENST00000590595	DALRD3	Q5D0E6	543 aa	Known RBP	21.32	■■□□□ 1
SEPT9-231	ENST00000590595	BRIP1	Q9BX63	1249 aa		21.32	■■□□□ 1
SEPT9-231	ENST00000590595	NEFM	P07197	916 aa		21.31	■■□□□ 1
SEPT9-231	ENST00000590595	PDIA6	Q15084	440 aa		21.31	■■□□□ 1
SEPT9-231	ENST00000590595	PRELP	P51888	382 aa		21.3	■■□□□ 1
SEPT9-231	ENST00000590595	RIPK4	P57078	832 aa		21.3	■■□□□ 1
SEPT9-231	ENST00000590595	C1QTNF8	P60827	252 aa		21.3	■■□□□ 1
SEPT9-231	ENST00000590595	RUNDC1	Q96C34	613 aa		21.3	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms