RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 TM4SF1P30408 202 aa24.07■■□□□ 1.44
PRKCSH-211ENST00000590098 ZBTB1Q9Y2K1 713 aa24.07■■□□□ 1.44
PRKCSH-211ENST00000590098 COL15A1P39059 1388 aa24.06■■□□□ 1.44
PRKCSH-211ENST00000590098 STARD3NLO95772 234 aa24.06■■□□□ 1.44
PRKCSH-211ENST00000590098 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
PRKCSH-211ENST00000590098 PIM2Q9P1W9 311 aa24.06■■□□□ 1.44
PRKCSH-211ENST00000590098 NARFQ9UHQ1 456 aa24.06■■□□□ 1.44
PRKCSH-211ENST00000590098 NUDCQ9Y266 331 aa24.06■■□□□ 1.44
PRKCSH-211ENST00000590098 POLRMTO00411 1230 aaKnown RBP24.05■■□□□ 1.44
PRKCSH-211ENST00000590098 ARFGEF1Q9Y6D6 1849 aa24.03■■□□□ 1.44
PRKCSH-211ENST00000590098 CANXP27824 592 aaKnown RBP24.03■■□□□ 1.44
PRKCSH-211ENST00000590098 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
PRKCSH-211ENST00000590098 ZNF790Q6PG37 636 aa24.03■■□□□ 1.44
PRKCSH-211ENST00000590098 TEX13AQ9BXU3 409 aaPredicted RBP24.03■■□□□ 1.44
PRKCSH-211ENST00000590098 KIF3CO14782 793 aa24.02■■□□□ 1.44
PRKCSH-211ENST00000590098 CHRNA5P30532 468 aa24.02■■□□□ 1.44
PRKCSH-211ENST00000590098 DALRD3Q5D0E6 543 aaKnown RBP24.02■■□□□ 1.44
PRKCSH-211ENST00000590098 SIPA1L3O60292 1781 aaPredicted RBP24.01■■□□□ 1.43
PRKCSH-211ENST00000590098 CEP350Q5VT06 3117 aa24.01■■□□□ 1.43
PRKCSH-211ENST00000590098 ZNF496Q96IT1 587 aaPredicted RBP24.01■■□□□ 1.43
PRKCSH-211ENST00000590098 PHACTR3Q96KR7 559 aa24.01■■□□□ 1.43
PRKCSH-211ENST00000590098 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
PRKCSH-211ENST00000590098 BCL2L12Q9HB09 334 aa24.01■■□□□ 1.43
PRKCSH-211ENST00000590098 A0A087WZG4 1122 aa24■■□□□ 1.43
PRKCSH-211ENST00000590098 PPP2R1AP30153 589 aa24■■□□□ 1.43
PRKCSH-211ENST00000590098 NFIXQ14938 502 aa24■■□□□ 1.43
PRKCSH-211ENST00000590098 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
PRKCSH-211ENST00000590098 HEG1Q9ULI3 1381 aa24■■□□□ 1.43
PRKCSH-211ENST00000590098 U2AF1L5P0DN76 240 aaPredicted RBP23.99■■□□□ 1.43
PRKCSH-211ENST00000590098 U2AF1Q01081 240 aaKnown RBP eCLIP23.99■■□□□ 1.43
PRKCSH-211ENST00000590098 EIF5P55010 431 aaKnown RBP23.98■■□□□ 1.43
PRKCSH-211ENST00000590098 FMNL2Q96PY5 1086 aa23.98■■□□□ 1.43
PRKCSH-211ENST00000590098 BTBD11A6QL63 1104 aa23.97■■□□□ 1.43
PRKCSH-211ENST00000590098 SERPINB2P05120 415 aa23.97■■□□□ 1.43
PRKCSH-211ENST00000590098 CEMIPQ8WUJ3 1361 aa23.97■■□□□ 1.43
PRKCSH-211ENST00000590098 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
PRKCSH-211ENST00000590098 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
PRKCSH-211ENST00000590098 ZNF330Q9Y3S2 320 aaPredicted RBP23.95■■□□□ 1.42
PRKCSH-211ENST00000590098 NRXN2Q9P2S2 1712 aa23.94■■□□□ 1.42
PRKCSH-211ENST00000590098 HSPA6P17066 643 aa23.94■■□□□ 1.42
PRKCSH-211ENST00000590098 C9orf131Q5VYM1 1079 aa23.94■■□□□ 1.42
PRKCSH-211ENST00000590098 BICDL1Q6ZP65 573 aa23.94■■□□□ 1.42
PRKCSH-211ENST00000590098 IL6STP40189 918 aaPredicted RBP23.93■■□□□ 1.42
PRKCSH-211ENST00000590098 KCNQ3O43525 872 aa23.92■■□□□ 1.42
PRKCSH-211ENST00000590098 NMRK2Q9NPI5 230 aa23.92■■□□□ 1.42
PRKCSH-211ENST00000590098 TBC1D2BQ9UPU7 963 aa23.91■■□□□ 1.42
PRKCSH-211ENST00000590098 A1BGP04217 495 aa23.9■■□□□ 1.42
PRKCSH-211ENST00000590098 MCM10Q7L590 875 aa23.9■■□□□ 1.42
PRKCSH-211ENST00000590098 H0YIN7 160 aa23.89■■□□□ 1.41
PRKCSH-211ENST00000590098 TBC1D9BQ66K14 1250 aa23.89■■□□□ 1.41
PRKCSH-211ENST00000590098 C2CD5Q86YS7 1000 aa23.89■■□□□ 1.41
PRKCSH-211ENST00000590098 RNF181Q9P0P0 153 aa23.89■■□□□ 1.41
PRKCSH-211ENST00000590098 SCN7AQ01118 1682 aa23.89■■□□□ 1.41
PRKCSH-211ENST00000590098 DLEC1Q9Y238 1755 aa23.88■■□□□ 1.41
PRKCSH-211ENST00000590098 SBF1O95248 1867 aa23.88■■□□□ 1.41
PRKCSH-211ENST00000590098 TTLL6Q8N841 843 aa23.88■■□□□ 1.41
PRKCSH-211ENST00000590098 HTATSF1O43719 755 aaKnown RBP23.87■■□□□ 1.41
PRKCSH-211ENST00000590098 NEFMP07197 916 aa23.87■■□□□ 1.41
PRKCSH-211ENST00000590098 TOMM70O94826 608 aa23.86■■□□□ 1.41
PRKCSH-211ENST00000590098 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
PRKCSH-211ENST00000590098 SNRPA1P09661 255 aaKnown RBP23.85■■□□□ 1.41
PRKCSH-211ENST00000590098 PRELPP51888 382 aa23.85■■□□□ 1.41
PRKCSH-211ENST00000590098 DCTN1Q14203 1278 aa23.85■■□□□ 1.41
PRKCSH-211ENST00000590098 SETDB2Q96T68 719 aa23.85■■□□□ 1.41
PRKCSH-211ENST00000590098 PDZRN3Q9UPQ7 1066 aa23.85■■□□□ 1.41
PRKCSH-211ENST00000590098 USP16Q9Y5T5 823 aa23.85■■□□□ 1.41
PRKCSH-211ENST00000590098 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
PRKCSH-211ENST00000590098 NPHP1O15259 732 aa23.84■■□□□ 1.41
PRKCSH-211ENST00000590098 PDE6BP35913 854 aa23.84■■□□□ 1.41
PRKCSH-211ENST00000590098 DZIP3Q86Y13 1208 aaKnown RBP23.84■■□□□ 1.41
PRKCSH-211ENST00000590098 CCDC24Q8N4L8 307 aa23.84■■□□□ 1.41
PRKCSH-211ENST00000590098 BRIP1Q9BX63 1249 aa23.84■■□□□ 1.41
PRKCSH-211ENST00000590098 PRAMEF22A3QJZ6 481 aa23.83■■□□□ 1.41
PRKCSH-211ENST00000590098 CAMTA2O94983 1202 aa23.83■■□□□ 1.41
PRKCSH-211ENST00000590098 RASSF7Q02833 373 aa23.83■■□□□ 1.41
PRKCSH-211ENST00000590098 C16orf71Q8IYS4 520 aaPredicted RBP23.83■■□□□ 1.41
PRKCSH-211ENST00000590098 ANKRD31Q8N7Z5 1873 aa23.82■■□□□ 1.4
PRKCSH-211ENST00000590098 PIP4K2AP48426 406 aaPredicted RBP23.82■■□□□ 1.4
PRKCSH-211ENST00000590098 TAF7Q15545 349 aaPredicted RBP23.82■■□□□ 1.4
PRKCSH-211ENST00000590098 PRR5LQ6MZQ0 368 aa23.82■■□□□ 1.4
PRKCSH-211ENST00000590098 ZNF622Q969S3 477 aaKnown RBP eCLIP23.82■■□□□ 1.4
PRKCSH-211ENST00000590098 BCORQ6W2J9 1755 aa23.8■■□□□ 1.4
PRKCSH-211ENST00000590098 LMNB1P20700 586 aa23.8■■□□□ 1.4
PRKCSH-211ENST00000590098 CNBD1Q8NA66 436 aa23.8■■□□□ 1.4
PRKCSH-211ENST00000590098 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
PRKCSH-211ENST00000590098 ST5P78524 1137 aa23.79■■□□□ 1.4
PRKCSH-211ENST00000590098 RRAGCQ9HB90 399 aa23.79■■□□□ 1.4
PRKCSH-211ENST00000590098 ZNF652Q9Y2D9 606 aa23.79■■□□□ 1.4
PRKCSH-211ENST00000590098 ZC3H4Q9UPT8 1303 aaKnown RBP23.79■■□□□ 1.4
PRKCSH-211ENST00000590098 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
PRKCSH-211ENST00000590098 CLEC4GQ6UXB4 293 aa23.78■■□□□ 1.4
PRKCSH-211ENST00000590098 RBM46Q8TBY0 533 aaKnown RBP23.78■■□□□ 1.4
PRKCSH-211ENST00000590098 APLP1P51693 650 aa23.77■■□□□ 1.4
PRKCSH-211ENST00000590098 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
PRKCSH-211ENST00000590098 DNAJC5GQ8N7S2 189 aa23.76■■□□□ 1.39
PRKCSH-211ENST00000590098 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
PRKCSH-211ENST00000590098 MIS18AQ9NYP9 233 aa23.76■■□□□ 1.39
PRKCSH-211ENST00000590098 TNRC6CQ9HCJ0 1690 aaKnown RBP23.76■■□□□ 1.39
PRKCSH-211ENST00000590098 NFKBIEO00221 500 aa23.75■■□□□ 1.39
PRKCSH-211ENST00000590098 COL11A2P13942 1736 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms