RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 TOMM70O94826 608 aa18.92■□□□□ 0.62
SF3A2-205ENST00000590034 CYP19A1P11511 503 aaPredicted RBP18.92■□□□□ 0.62
SF3A2-205ENST00000590034 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
SF3A2-205ENST00000590034 DALRD3Q5D0E6 543 aaKnown RBP18.92■□□□□ 0.62
SF3A2-205ENST00000590034 ZBTB1Q9Y2K1 713 aa18.92■□□□□ 0.62
SF3A2-205ENST00000590034 COL3A1P02461 1466 aaPredicted RBP18.91■□□□□ 0.62
SF3A2-205ENST00000590034 COL15A1P39059 1388 aa18.91■□□□□ 0.62
SF3A2-205ENST00000590034 BCL2L12Q9HB09 334 aa18.9■□□□□ 0.62
SF3A2-205ENST00000590034 WDR90Q96KV7 1748 aa18.89■□□□□ 0.61
SF3A2-205ENST00000590034 ZPR1O75312 459 aa18.89■□□□□ 0.61
SF3A2-205ENST00000590034 NFIXQ14938 502 aa18.89■□□□□ 0.61
SF3A2-205ENST00000590034 NARFQ9UHQ1 456 aa18.89■□□□□ 0.61
SF3A2-205ENST00000590034 SIPA1L3O60292 1781 aaPredicted RBP18.88■□□□□ 0.61
SF3A2-205ENST00000590034 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
SF3A2-205ENST00000590034 APLP1P51693 650 aa18.88■□□□□ 0.61
SF3A2-205ENST00000590034 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
SF3A2-205ENST00000590034 TNRC6CQ9HCJ0 1690 aaKnown RBP18.87■□□□□ 0.61
SF3A2-205ENST00000590034 RNF181Q9P0P0 153 aa18.87■□□□□ 0.61
SF3A2-205ENST00000590034 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
SF3A2-205ENST00000590034 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
SF3A2-205ENST00000590034 DNAJC5GQ8N7S2 189 aa18.86■□□□□ 0.61
SF3A2-205ENST00000590034 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
SF3A2-205ENST00000590034 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
SF3A2-205ENST00000590034 RASSF7Q02833 373 aa18.85■□□□□ 0.61
SF3A2-205ENST00000590034 CCDC88AQ3V6T2 1871 aa18.85■□□□□ 0.61
SF3A2-205ENST00000590034 RBM46Q8TBY0 533 aaKnown RBP18.84■□□□□ 0.61
SF3A2-205ENST00000590034 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
SF3A2-205ENST00000590034 PRELPP51888 382 aa18.83■□□□□ 0.6
SF3A2-205ENST00000590034 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.6
SF3A2-205ENST00000590034 SERPINB2P05120 415 aa18.82■□□□□ 0.6
SF3A2-205ENST00000590034 COL11A2P13942 1736 aaPredicted RBP18.82■□□□□ 0.6
SF3A2-205ENST00000590034 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
SF3A2-205ENST00000590034 EIF5P55010 431 aaKnown RBP18.81■□□□□ 0.6
SF3A2-205ENST00000590034 HTRA3P83110 453 aa18.81■□□□□ 0.6
SF3A2-205ENST00000590034 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
SF3A2-205ENST00000590034 ZNF496Q96IT1 587 aaPredicted RBP18.81■□□□□ 0.6
SF3A2-205ENST00000590034 NPC1L1Q9UHC9 1359 aa18.81■□□□□ 0.6
SF3A2-205ENST00000590034 RRAGCQ9HB90 399 aa18.8■□□□□ 0.6
SF3A2-205ENST00000590034 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
SF3A2-205ENST00000590034 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
SF3A2-205ENST00000590034 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
SF3A2-205ENST00000590034 BICDL1Q6ZP65 573 aa18.79■□□□□ 0.6
SF3A2-205ENST00000590034 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
SF3A2-205ENST00000590034 TTC5Q8N0Z6 440 aa18.79■□□□□ 0.6
SF3A2-205ENST00000590034 TBC1D9BQ66K14 1250 aa18.78■□□□□ 0.6
SF3A2-205ENST00000590034 ZNF790Q6PG37 636 aa18.78■□□□□ 0.6
SF3A2-205ENST00000590034 C2CD5Q86YS7 1000 aa18.78■□□□□ 0.6
SF3A2-205ENST00000590034 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
SF3A2-205ENST00000590034 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.6
SF3A2-205ENST00000590034 NFKBIEO00221 500 aa18.77■□□□□ 0.6
SF3A2-205ENST00000590034 STARD3NLO95772 234 aa18.77■□□□□ 0.6
SF3A2-205ENST00000590034 FSTL1Q12841 308 aa18.77■□□□□ 0.6
SF3A2-205ENST00000590034 TTLL6Q8N841 843 aa18.77■□□□□ 0.6
SF3A2-205ENST00000590034 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
SF3A2-205ENST00000590034 ZC3H4Q9UPT8 1303 aaKnown RBP18.76■□□□□ 0.59
SF3A2-205ENST00000590034 FER1L6Q2WGJ9 1857 aa18.76■□□□□ 0.59
SF3A2-205ENST00000590034 LMNB1P20700 586 aa18.76■□□□□ 0.59
SF3A2-205ENST00000590034 TEFQ10587 303 aa18.76■□□□□ 0.59
SF3A2-205ENST00000590034 GAS2L2Q8NHY3 880 aa18.76■□□□□ 0.59
SF3A2-205ENST00000590034 PCNTO95613 3336 aa18.76■□□□□ 0.59
SF3A2-205ENST00000590034 CACNA1SQ13698 1873 aa18.75■□□□□ 0.59
SF3A2-205ENST00000590034 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
SF3A2-205ENST00000590034 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
SF3A2-205ENST00000590034 TBC1D2BQ9UPU7 963 aa18.75■□□□□ 0.59
SF3A2-205ENST00000590034 DICER1Q9UPY3 1922 aaKnown RBP18.74■□□□□ 0.59
SF3A2-205ENST00000590034 A0A087WZG4 1122 aa18.74■□□□□ 0.59
SF3A2-205ENST00000590034 H0YIN7 160 aa18.74■□□□□ 0.59
SF3A2-205ENST00000590034 KCNQ3O43525 872 aa18.74■□□□□ 0.59
SF3A2-205ENST00000590034 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
SF3A2-205ENST00000590034 KLRG1Q96E93 195 aa18.74■□□□□ 0.59
SF3A2-205ENST00000590034 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
SF3A2-205ENST00000590034 A1BGP04217 495 aa18.73■□□□□ 0.59
SF3A2-205ENST00000590034 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
SF3A2-205ENST00000590034 SLX4Q8IY92 1834 aa18.72■□□□□ 0.59
SF3A2-205ENST00000590034 GLTPD2A6NH11 291 aa18.72■□□□□ 0.59
SF3A2-205ENST00000590034 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
SF3A2-205ENST00000590034 ARFGEF2Q9Y6D5 1785 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 CAMTA2O94983 1202 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 JMYQ8N9B5 988 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 BRIP1Q9BX63 1249 aa18.71■□□□□ 0.59
SF3A2-205ENST00000590034 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-205ENST00000590034 ZNF622Q969S3 477 aaKnown RBP eCLIP18.7■□□□□ 0.58
SF3A2-205ENST00000590034 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
SF3A2-205ENST00000590034 POTECB2RU33 542 aa18.69■□□□□ 0.58
SF3A2-205ENST00000590034 C21orf2O43822 256 aa18.69■□□□□ 0.58
SF3A2-205ENST00000590034 PDE6BP35913 854 aa18.69■□□□□ 0.58
SF3A2-205ENST00000590034 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-205ENST00000590034 ZNF219Q9P2Y4 722 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-205ENST00000590034 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
SF3A2-205ENST00000590034 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-205ENST00000590034 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
SF3A2-205ENST00000590034 CNBD1Q8NA66 436 aa18.67■□□□□ 0.58
SF3A2-205ENST00000590034 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
SF3A2-205ENST00000590034 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
SF3A2-205ENST00000590034 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
SF3A2-205ENST00000590034 MCM10Q7L590 875 aa18.65■□□□□ 0.58
SF3A2-205ENST00000590034 SRGNP10124 158 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms