RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
PTBP1-215ENST00000589883 WDR43Q15061 677 aaKnown RBP eCLIP25.7■■□□□ 1.7
PTBP1-215ENST00000589883 VSIG10Q8N0Z9 540 aa25.7■■□□□ 1.7
PTBP1-215ENST00000589883 CYP19A1P11511 503 aaPredicted RBP25.69■■□□□ 1.7
PTBP1-215ENST00000589883 SLC39A6Q13433 755 aa25.69■■□□□ 1.7
PTBP1-215ENST00000589883 SOS1Q07889 1333 aaPredicted RBP25.68■■□□□ 1.7
PTBP1-215ENST00000589883 VIRMAQ69YN4 1812 aaKnown RBP25.68■■□□□ 1.7
PTBP1-215ENST00000589883 TTC5Q8N0Z6 440 aa25.68■■□□□ 1.7
PTBP1-215ENST00000589883 DDR1Q08345 913 aa25.67■■□□□ 1.7
PTBP1-215ENST00000589883 DALRD3Q5D0E6 543 aaKnown RBP25.67■■□□□ 1.7
PTBP1-215ENST00000589883 GAS2L2Q8NHY3 880 aa25.67■■□□□ 1.7
PTBP1-215ENST00000589883 BRCA1P38398 1863 aaKnown RBP25.66■■□□□ 1.7
PTBP1-215ENST00000589883 HSPA6P17066 643 aa25.66■■□□□ 1.7
PTBP1-215ENST00000589883 TM4SF1P30408 202 aa25.66■■□□□ 1.7
PTBP1-215ENST00000589883 USPL1Q5W0Q7 1092 aa25.66■■□□□ 1.7
PTBP1-215ENST00000589883 NARFQ9UHQ1 456 aa25.66■■□□□ 1.7
PTBP1-215ENST00000589883 POLRMTO00411 1230 aaKnown RBP25.65■■□□□ 1.7
PTBP1-215ENST00000589883 STARD3NLO95772 234 aa25.65■■□□□ 1.7
PTBP1-215ENST00000589883 KCNA3P22001 575 aa25.65■■□□□ 1.7
PTBP1-215ENST00000589883 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.7
PTBP1-215ENST00000589883 TEFQ10587 303 aa25.64■■□□□ 1.7
PTBP1-215ENST00000589883 ARFGEF1Q9Y6D6 1849 aa25.64■■□□□ 1.7
PTBP1-215ENST00000589883 KCPQ6ZWJ8 1503 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 GNAT3A8MTJ3 354 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 KIF3CO14782 793 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 MIER1Q8N108 512 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 PHACTR3Q96KR7 559 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 ADAMTS8Q9UP79 889 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 COL15A1P39059 1388 aa25.63■■□□□ 1.69
PTBP1-215ENST00000589883 TEX13AQ9BXU3 409 aaPredicted RBP25.62■■□□□ 1.69
PTBP1-215ENST00000589883 ZBTB1Q9Y2K1 713 aa25.62■■□□□ 1.69
PTBP1-215ENST00000589883 A0A087WZG4 1122 aa25.61■■□□□ 1.69
PTBP1-215ENST00000589883 CCDC146Q8IYE0 955 aa25.6■■□□□ 1.69
PTBP1-215ENST00000589883 NEFMP07197 916 aa25.59■■□□□ 1.69
PTBP1-215ENST00000589883 NFIXQ14938 502 aa25.59■■□□□ 1.69
PTBP1-215ENST00000589883 C9orf131Q5VYM1 1079 aa25.59■■□□□ 1.69
PTBP1-215ENST00000589883 PNISRQ8TF01 805 aaKnown RBP25.59■■□□□ 1.69
PTBP1-215ENST00000589883 PLEKHF1Q96S99 279 aa25.59■■□□□ 1.69
PTBP1-215ENST00000589883 PNNQ9H307 717 aaKnown RBP25.59■■□□□ 1.69
PTBP1-215ENST00000589883 CEP350Q5VT06 3117 aa25.59■■□□□ 1.69
PTBP1-215ENST00000589883 TOMM70O94826 608 aa25.58■■□□□ 1.69
PTBP1-215ENST00000589883 CANXP27824 592 aaKnown RBP25.58■■□□□ 1.69
PTBP1-215ENST00000589883 CHRNA5P30532 468 aa25.58■■□□□ 1.69
PTBP1-215ENST00000589883 UBR2Q8IWV8 1755 aa25.57■■□□□ 1.68
PTBP1-215ENST00000589883 ZNF790Q6PG37 636 aa25.57■■□□□ 1.68
PTBP1-215ENST00000589883 NPM2Q86SE8 214 aaKnown RBP25.57■■□□□ 1.68
PTBP1-215ENST00000589883 MAPK8IP3Q9UPT6 1336 aa25.57■■□□□ 1.68
PTBP1-215ENST00000589883 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
PTBP1-215ENST00000589883 CCER2I3L3R5 266 aa25.55■■□□□ 1.68
PTBP1-215ENST00000589883 SERPINB2P05120 415 aa25.55■■□□□ 1.68
PTBP1-215ENST00000589883 HEG1Q9ULI3 1381 aa25.55■■□□□ 1.68
PTBP1-215ENST00000589883 EIF5P55010 431 aaKnown RBP25.54■■□□□ 1.68
PTBP1-215ENST00000589883 ZNF496Q96IT1 587 aaPredicted RBP25.54■■□□□ 1.68
PTBP1-215ENST00000589883 FMNL2Q96PY5 1086 aa25.54■■□□□ 1.68
PTBP1-215ENST00000589883 KDM2BQ8NHM5 1336 aa25.54■■□□□ 1.68
PTBP1-215ENST00000589883 C16orf71Q8IYS4 520 aaPredicted RBP25.53■■□□□ 1.68
PTBP1-215ENST00000589883 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
PTBP1-215ENST00000589883 RNF181Q9P0P0 153 aa25.53■■□□□ 1.68
PTBP1-215ENST00000589883 AFDNP55196 1824 aaKnown RBP25.52■■□□□ 1.68
PTBP1-215ENST00000589883 APLP1P51693 650 aa25.52■■□□□ 1.68
PTBP1-215ENST00000589883 RUNDC1Q96C34 613 aa25.52■■□□□ 1.68
PTBP1-215ENST00000589883 BCL2L12Q9HB09 334 aa25.52■■□□□ 1.68
PTBP1-215ENST00000589883 NMRK2Q9NPI5 230 aa25.51■■□□□ 1.67
PTBP1-215ENST00000589883 PDZRN3Q9UPQ7 1066 aa25.51■■□□□ 1.67
PTBP1-215ENST00000589883 NRXN2Q9P2S2 1712 aa25.51■■□□□ 1.67
PTBP1-215ENST00000589883 H0YIN7 160 aa25.5■■□□□ 1.67
PTBP1-215ENST00000589883 IL6STP40189 918 aaPredicted RBP25.5■■□□□ 1.67
PTBP1-215ENST00000589883 TTLL6Q8N841 843 aa25.5■■□□□ 1.67
PTBP1-215ENST00000589883 CEMIPQ8WUJ3 1361 aa25.49■■□□□ 1.67
PTBP1-215ENST00000589883 ZC3H4Q9UPT8 1303 aaKnown RBP25.49■■□□□ 1.67
PTBP1-215ENST00000589883 BTBD11A6QL63 1104 aa25.49■■□□□ 1.67
PTBP1-215ENST00000589883 NFE2L2Q16236 605 aa25.49■■□□□ 1.67
PTBP1-215ENST00000589883 ZNF330Q9Y3S2 320 aaPredicted RBP25.49■■□□□ 1.67
PTBP1-215ENST00000589883 BICDL1Q6ZP65 573 aa25.48■■□□□ 1.67
PTBP1-215ENST00000589883 C2CD5Q86YS7 1000 aa25.48■■□□□ 1.67
PTBP1-215ENST00000589883 RBM46Q8TBY0 533 aaKnown RBP25.48■■□□□ 1.67
PTBP1-215ENST00000589883 RTF1Q92541 710 aaKnown RBP25.48■■□□□ 1.67
PTBP1-215ENST00000589883 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
PTBP1-215ENST00000589883 SIPA1L3O60292 1781 aaPredicted RBP25.48■■□□□ 1.67
PTBP1-215ENST00000589883 SBF1O95248 1867 aa25.45■■□□□ 1.67
PTBP1-215ENST00000589883 PDE6BP35913 854 aa25.45■■□□□ 1.66
PTBP1-215ENST00000589883 TMPOP42166 694 aaKnown RBP25.45■■□□□ 1.66
PTBP1-215ENST00000589883 NEUROD2Q15784 382 aa25.45■■□□□ 1.66
PTBP1-215ENST00000589883 CARMIL3Q8ND23 1372 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 DLEC1Q9Y238 1755 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 APAF1O14727 1248 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 LMNB1P20700 586 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 TBC1D9BQ66K14 1250 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 BRIP1Q9BX63 1249 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 TBC1D2BQ9UPU7 963 aa25.44■■□□□ 1.66
PTBP1-215ENST00000589883 NPHP1O15259 732 aa25.43■■□□□ 1.66
PTBP1-215ENST00000589883 RIPK4P57078 832 aa25.43■■□□□ 1.66
PTBP1-215ENST00000589883 FSTL1Q12841 308 aa25.43■■□□□ 1.66
PTBP1-215ENST00000589883 DCTN1Q14203 1278 aa25.43■■□□□ 1.66
PTBP1-215ENST00000589883 MCM10Q7L590 875 aa25.43■■□□□ 1.66
PTBP1-215ENST00000589883 SETDB2Q96T68 719 aa25.43■■□□□ 1.66
PTBP1-215ENST00000589883 HTATSF1O43719 755 aaKnown RBP25.41■■□□□ 1.66
PTBP1-215ENST00000589883 A1BGP04217 495 aa25.41■■□□□ 1.66
PTBP1-215ENST00000589883 SCN7AQ01118 1682 aa25.41■■□□□ 1.66
PTBP1-215ENST00000589883 RASSF7Q02833 373 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms