RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
MBD1-220ENST00000589758 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
MBD1-220ENST00000589758 COL15A1P39059 1388 aa19.19■□□□□ 0.66
MBD1-220ENST00000589758 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
MBD1-220ENST00000589758 DPEP1P16444 411 aa19.18■□□□□ 0.66
MBD1-220ENST00000589758 TM4SF1P30408 202 aa19.18■□□□□ 0.66
MBD1-220ENST00000589758 USPL1Q5W0Q7 1092 aa19.18■□□□□ 0.66
MBD1-220ENST00000589758 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
MBD1-220ENST00000589758 CEMIPQ8WUJ3 1361 aa19.18■□□□□ 0.66
MBD1-220ENST00000589758 SIPA1L3O60292 1781 aaPredicted RBP19.17■□□□□ 0.66
MBD1-220ENST00000589758 DDR1Q08345 913 aa19.17■□□□□ 0.66
MBD1-220ENST00000589758 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
MBD1-220ENST00000589758 ADCY9O60503 1353 aa19.17■□□□□ 0.66
MBD1-220ENST00000589758 HEG1Q9ULI3 1381 aa19.17■□□□□ 0.66
MBD1-220ENST00000589758 POLRMTO00411 1230 aaKnown RBP19.16■□□□□ 0.66
MBD1-220ENST00000589758 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
MBD1-220ENST00000589758 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
MBD1-220ENST00000589758 FMNL2Q96PY5 1086 aa19.16■□□□□ 0.66
MBD1-220ENST00000589758 PIM2Q9P1W9 311 aa19.16■□□□□ 0.66
MBD1-220ENST00000589758 A0A087WZG4 1122 aa19.15■□□□□ 0.66
MBD1-220ENST00000589758 BTBD11A6QL63 1104 aa19.15■□□□□ 0.66
MBD1-220ENST00000589758 GPBP1L1Q9HC44 474 aaPredicted RBP19.15■□□□□ 0.66
MBD1-220ENST00000589758 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
MBD1-220ENST00000589758 BRCA1P38398 1863 aaKnown RBP19.14■□□□□ 0.65
MBD1-220ENST00000589758 HTATSF1O43719 755 aaKnown RBP19.13■□□□□ 0.65
MBD1-220ENST00000589758 KCNA3P22001 575 aa19.13■□□□□ 0.65
MBD1-220ENST00000589758 NEFMP07197 916 aa19.12■□□□□ 0.65
MBD1-220ENST00000589758 NFIXQ14938 502 aa19.12■□□□□ 0.65
MBD1-220ENST00000589758 ARHGAP27Q6ZUM4 889 aa19.12■□□□□ 0.65
MBD1-220ENST00000589758 BCL2L12Q9HB09 334 aa19.12■□□□□ 0.65
MBD1-220ENST00000589758 IL6STP40189 918 aaPredicted RBP19.11■□□□□ 0.65
MBD1-220ENST00000589758 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
MBD1-220ENST00000589758 ARFGEF1Q9Y6D6 1849 aa19.1■□□□□ 0.65
MBD1-220ENST00000589758 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
MBD1-220ENST00000589758 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
MBD1-220ENST00000589758 SERPINB2P05120 415 aa19.09■□□□□ 0.65
MBD1-220ENST00000589758 ZNF526Q8TF50 670 aaPredicted RBP19.09■□□□□ 0.65
MBD1-220ENST00000589758 AFDNP55196 1824 aaKnown RBP19.09■□□□□ 0.65
MBD1-220ENST00000589758 NRXN2Q9P2S2 1712 aa19.08■□□□□ 0.65
MBD1-220ENST00000589758 KCNQ3O43525 872 aa19.08■□□□□ 0.64
MBD1-220ENST00000589758 CHRNA5P30532 468 aa19.08■□□□□ 0.64
MBD1-220ENST00000589758 MCM10Q7L590 875 aa19.08■□□□□ 0.64
MBD1-220ENST00000589758 A1BGP04217 495 aa19.07■□□□□ 0.64
MBD1-220ENST00000589758 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
MBD1-220ENST00000589758 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
MBD1-220ENST00000589758 SNRPA1P09661 255 aaKnown RBP19.06■□□□□ 0.64
MBD1-220ENST00000589758 DCTN1Q14203 1278 aa19.05■□□□□ 0.64
MBD1-220ENST00000589758 TAF7Q15545 349 aaPredicted RBP19.05■□□□□ 0.64
MBD1-220ENST00000589758 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
MBD1-220ENST00000589758 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
MBD1-220ENST00000589758 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
MBD1-220ENST00000589758 TBC1D9BQ66K14 1250 aa19.04■□□□□ 0.64
MBD1-220ENST00000589758 SCN7AQ01118 1682 aa19.04■□□□□ 0.64
MBD1-220ENST00000589758 PDZRN3Q9UPQ7 1066 aa19.03■□□□□ 0.64
MBD1-220ENST00000589758 H0YIN7 160 aa19.02■□□□□ 0.64
MBD1-220ENST00000589758 RALBP1Q15311 655 aa19.02■□□□□ 0.64
MBD1-220ENST00000589758 DZIP3Q86Y13 1208 aaKnown RBP19.02■□□□□ 0.64
MBD1-220ENST00000589758 C2CD5Q86YS7 1000 aa19.02■□□□□ 0.64
MBD1-220ENST00000589758 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
MBD1-220ENST00000589758 PLEKHF1Q96S99 279 aa19.02■□□□□ 0.64
MBD1-220ENST00000589758 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.64
MBD1-220ENST00000589758 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
MBD1-220ENST00000589758 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
MBD1-220ENST00000589758 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
MBD1-220ENST00000589758 DLEC1Q9Y238 1755 aa19.01■□□□□ 0.63
MBD1-220ENST00000589758 PDE6BP35913 854 aa19■□□□□ 0.63
MBD1-220ENST00000589758 NFE2L2Q16236 605 aa19■□□□□ 0.63
MBD1-220ENST00000589758 TTLL6Q8N841 843 aa19■□□□□ 0.63
MBD1-220ENST00000589758 BRIP1Q9BX63 1249 aa19■□□□□ 0.63
MBD1-220ENST00000589758 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
MBD1-220ENST00000589758 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
MBD1-220ENST00000589758 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
MBD1-220ENST00000589758 KIF3CO14782 793 aa18.99■□□□□ 0.63
MBD1-220ENST00000589758 CLEC4GQ6UXB4 293 aa18.99■□□□□ 0.63
MBD1-220ENST00000589758 ZNF652Q9Y2D9 606 aa18.99■□□□□ 0.63
MBD1-220ENST00000589758 RGL2O15211 777 aa18.98■□□□□ 0.63
MBD1-220ENST00000589758 PRR5LQ6MZQ0 368 aa18.98■□□□□ 0.63
MBD1-220ENST00000589758 RNF181Q9P0P0 153 aa18.98■□□□□ 0.63
MBD1-220ENST00000589758 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
MBD1-220ENST00000589758 NPHP1O15259 732 aa18.97■□□□□ 0.63
MBD1-220ENST00000589758 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
MBD1-220ENST00000589758 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
MBD1-220ENST00000589758 MIS18AQ9NYP9 233 aa18.97■□□□□ 0.63
MBD1-220ENST00000589758 ST5P78524 1137 aa18.96■□□□□ 0.63
MBD1-220ENST00000589758 SBF1O95248 1867 aa18.95■□□□□ 0.62
MBD1-220ENST00000589758 ANKRD31Q8N7Z5 1873 aa18.95■□□□□ 0.62
MBD1-220ENST00000589758 HSPA6P17066 643 aa18.95■□□□□ 0.62
MBD1-220ENST00000589758 DDX10Q13206 875 aaKnown RBP18.95■□□□□ 0.62
MBD1-220ENST00000589758 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
MBD1-220ENST00000589758 ZNF622Q969S3 477 aaKnown RBP eCLIP18.95■□□□□ 0.624e-8■□□□□ 8.7
MBD1-220ENST00000589758 KDM2BQ8NHM5 1336 aa18.95■□□□□ 0.62
MBD1-220ENST00000589758 ZC3H4Q9UPT8 1303 aaKnown RBP18.95■□□□□ 0.62
MBD1-220ENST00000589758 KDM3BQ7LBC6 1761 aa18.94■□□□□ 0.62
MBD1-220ENST00000589758 NBPF26B4DH59 902 aa18.94■□□□□ 0.62
MBD1-220ENST00000589758 TOMM70O94826 608 aa18.94■□□□□ 0.62
MBD1-220ENST00000589758 NBPF10Q6P3W6 841 aaKnown RBP18.94■□□□□ 0.62
MBD1-220ENST00000589758 NBPF15Q8N660 670 aa18.94■□□□□ 0.62
MBD1-220ENST00000589758 LAMB4A4D0S4 1761 aa18.93■□□□□ 0.62
MBD1-220ENST00000589758 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
MBD1-220ENST00000589758 LMNB1P20700 586 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms