RNA–Protein interactions for RNA: ENST00000589628.1

RTN2-207, Transcript of reticulon 2, humanhuman

TSL 3

Gene RTN2, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-207ENST00000589628 KIF3CO14782 793 aa17.38■□□□□ 0.37
RTN2-207ENST00000589628 NFIXQ14938 502 aa17.38■□□□□ 0.37
RTN2-207ENST00000589628 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
RTN2-207ENST00000589628 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
RTN2-207ENST00000589628 MRC1P22897 1456 aa17.37■□□□□ 0.37
RTN2-207ENST00000589628 KCNQ3O43525 872 aa17.36■□□□□ 0.37
RTN2-207ENST00000589628 DALRD3Q5D0E6 543 aaKnown RBP17.36■□□□□ 0.37
RTN2-207ENST00000589628 GAS2L2Q8NHY3 880 aa17.36■□□□□ 0.37
RTN2-207ENST00000589628 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
RTN2-207ENST00000589628 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
RTN2-207ENST00000589628 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
RTN2-207ENST00000589628 TEFQ10587 303 aa17.35■□□□□ 0.37
RTN2-207ENST00000589628 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
RTN2-207ENST00000589628 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
RTN2-207ENST00000589628 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
RTN2-207ENST00000589628 STARD3NLO95772 234 aa17.34■□□□□ 0.37
RTN2-207ENST00000589628 SERPINB2P05120 415 aa17.34■□□□□ 0.37
RTN2-207ENST00000589628 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
RTN2-207ENST00000589628 COL15A1P39059 1388 aa17.34■□□□□ 0.37
RTN2-207ENST00000589628 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
RTN2-207ENST00000589628 BICDL1Q6ZP65 573 aa17.33■□□□□ 0.36
RTN2-207ENST00000589628 A1BGP04217 495 aa17.32■□□□□ 0.36
RTN2-207ENST00000589628 CFAP53Q96M91 514 aa17.32■□□□□ 0.36
RTN2-207ENST00000589628 NMRK2Q9NPI5 230 aa17.32■□□□□ 0.36
RTN2-207ENST00000589628 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
RTN2-207ENST00000589628 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
RTN2-207ENST00000589628 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
RTN2-207ENST00000589628 HSPA6P17066 643 aa17.31■□□□□ 0.36
RTN2-207ENST00000589628 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTN2-207ENST00000589628 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
RTN2-207ENST00000589628 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
RTN2-207ENST00000589628 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
RTN2-207ENST00000589628 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
RTN2-207ENST00000589628 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
RTN2-207ENST00000589628 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
RTN2-207ENST00000589628 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
RTN2-207ENST00000589628 A0A087WZG4 1122 aa17.29■□□□□ 0.36
RTN2-207ENST00000589628 MCM10Q7L590 875 aa17.29■□□□□ 0.36
RTN2-207ENST00000589628 CCDC24Q8N4L8 307 aa17.29■□□□□ 0.36
RTN2-207ENST00000589628 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
RTN2-207ENST00000589628 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
RTN2-207ENST00000589628 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
RTN2-207ENST00000589628 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
RTN2-207ENST00000589628 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
RTN2-207ENST00000589628 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
RTN2-207ENST00000589628 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
RTN2-207ENST00000589628 RNF181Q9P0P0 153 aa17.28■□□□□ 0.36
RTN2-207ENST00000589628 IL6STP40189 918 aaPredicted RBP17.27■□□□□ 0.36
RTN2-207ENST00000589628 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
RTN2-207ENST00000589628 PRELPP51888 382 aa17.27■□□□□ 0.36
RTN2-207ENST00000589628 TOMM70O94826 608 aa17.26■□□□□ 0.35
RTN2-207ENST00000589628 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
RTN2-207ENST00000589628 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
RTN2-207ENST00000589628 H0YIN7 160 aa17.25■□□□□ 0.35
RTN2-207ENST00000589628 RASSF7Q02833 373 aa17.25■□□□□ 0.35
RTN2-207ENST00000589628 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
RTN2-207ENST00000589628 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
RTN2-207ENST00000589628 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
RTN2-207ENST00000589628 RRAGCQ9HB90 399 aa17.24■□□□□ 0.35
RTN2-207ENST00000589628 MIS18AQ9NYP9 233 aa17.24■□□□□ 0.35
RTN2-207ENST00000589628 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
RTN2-207ENST00000589628 PRR5LQ6MZQ0 368 aa17.23■□□□□ 0.35
RTN2-207ENST00000589628 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
RTN2-207ENST00000589628 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
RTN2-207ENST00000589628 ZNF622Q969S3 477 aaKnown RBP eCLIP17.22■□□□□ 0.35
RTN2-207ENST00000589628 BRIP1Q9BX63 1249 aa17.22■□□□□ 0.35
RTN2-207ENST00000589628 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
RTN2-207ENST00000589628 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
RTN2-207ENST00000589628 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
RTN2-207ENST00000589628 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
RTN2-207ENST00000589628 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
RTN2-207ENST00000589628 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
RTN2-207ENST00000589628 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
RTN2-207ENST00000589628 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
RTN2-207ENST00000589628 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
RTN2-207ENST00000589628 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
RTN2-207ENST00000589628 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
RTN2-207ENST00000589628 NFKBIEO00221 500 aa17.19■□□□□ 0.34
RTN2-207ENST00000589628 LMNB1P20700 586 aa17.19■□□□□ 0.34
RTN2-207ENST00000589628 PDE6BP35913 854 aa17.19■□□□□ 0.34
RTN2-207ENST00000589628 DNAJC5GQ8N7S2 189 aa17.19■□□□□ 0.34
RTN2-207ENST00000589628 RBM46Q8TBY0 533 aaKnown RBP17.19■□□□□ 0.34
RTN2-207ENST00000589628 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
RTN2-207ENST00000589628 SBF1O95248 1867 aa17.18■□□□□ 0.34
RTN2-207ENST00000589628 C21orf2O43822 256 aa17.18■□□□□ 0.34
RTN2-207ENST00000589628 APLP1P51693 650 aa17.18■□□□□ 0.34
RTN2-207ENST00000589628 HTRA3P83110 453 aa17.17■□□□□ 0.34
RTN2-207ENST00000589628 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
RTN2-207ENST00000589628 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
RTN2-207ENST00000589628 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
RTN2-207ENST00000589628 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
RTN2-207ENST00000589628 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
RTN2-207ENST00000589628 SRGNP10124 158 aa17.15■□□□□ 0.34
RTN2-207ENST00000589628 CLEC4GQ6UXB4 293 aa17.15■□□□□ 0.34
RTN2-207ENST00000589628 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
RTN2-207ENST00000589628 NPHP1O15259 732 aa17.14■□□□□ 0.33
RTN2-207ENST00000589628 HLFQ16534 295 aa17.14■□□□□ 0.33
RTN2-207ENST00000589628 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
RTN2-207ENST00000589628 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
RTN2-207ENST00000589628 POTECB2RU33 542 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms