RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 TM4SF1P30408 202 aa31.99■■■□□ 2.71
LSM7-205ENST00000589532 GAS2L2Q8NHY3 880 aa31.99■■■□□ 2.71
LSM7-205ENST00000589532 USPL1Q5W0Q7 1092 aa31.98■■■□□ 2.71
LSM7-205ENST00000589532 RSPH6AQ9H0K4 717 aa31.98■■■□□ 2.71
LSM7-205ENST00000589532 BCS1LQ9Y276 419 aa31.98■■■□□ 2.71
LSM7-205ENST00000589532 GNAT3A8MTJ3 354 aa31.97■■■□□ 2.71
LSM7-205ENST00000589532 GPBP1L1Q9HC44 474 aaPredicted RBP31.97■■■□□ 2.71
LSM7-205ENST00000589532 NARFQ9UHQ1 456 aa31.96■■■□□ 2.71
LSM7-205ENST00000589532 DLEC1Q9Y238 1755 aa31.96■■■□□ 2.71
LSM7-205ENST00000589532 BCL2L12Q9HB09 334 aa31.95■■■□□ 2.71
LSM7-205ENST00000589532 HEG1Q9ULI3 1381 aa31.94■■■□□ 2.7
LSM7-205ENST00000589532 PHACTR3Q96KR7 559 aa31.94■■■□□ 2.7
LSM7-205ENST00000589532 ZPR1O75312 459 aa31.93■■■□□ 2.7
LSM7-205ENST00000589532 ZNF496Q96IT1 587 aaPredicted RBP31.93■■■□□ 2.7
LSM7-205ENST00000589532 PPP2R1AP30153 589 aa31.92■■■□□ 2.7
LSM7-205ENST00000589532 PRKAR2BP31323 418 aa31.92■■■□□ 2.7
LSM7-205ENST00000589532 ZNF790Q6PG37 636 aa31.92■■■□□ 2.7
LSM7-205ENST00000589532 FCHSD2O94868 740 aa31.91■■■□□ 2.7
LSM7-205ENST00000589532 NFIXQ14938 502 aa31.91■■■□□ 2.7
LSM7-205ENST00000589532 TTC5Q8N0Z6 440 aa31.91■■■□□ 2.7
LSM7-205ENST00000589532 ZNF526Q8TF50 670 aaPredicted RBP31.91■■■□□ 2.7
LSM7-205ENST00000589532 TEFQ10587 303 aa31.9■■■□□ 2.7
LSM7-205ENST00000589532 CFAP53Q96M91 514 aa31.9■■■□□ 2.7
LSM7-205ENST00000589532 EIF5P55010 431 aaKnown RBP31.89■■■□□ 2.7
LSM7-205ENST00000589532 PIM2Q9P1W9 311 aa31.88■■■□□ 2.69
LSM7-205ENST00000589532 BCORQ6W2J9 1755 aa31.87■■■□□ 2.69
LSM7-205ENST00000589532 CHRNA5P30532 468 aa31.87■■■□□ 2.69
LSM7-205ENST00000589532 KIF3CO14782 793 aa31.86■■■□□ 2.69
LSM7-205ENST00000589532 STARD3NLO95772 234 aa31.86■■■□□ 2.69
LSM7-205ENST00000589532 CARMIL3Q8ND23 1372 aa31.85■■■□□ 2.69
LSM7-205ENST00000589532 CANXP27824 592 aaKnown RBP31.85■■■□□ 2.69
LSM7-205ENST00000589532 ARHGAP27Q6ZUM4 889 aa31.84■■■□□ 2.69
LSM7-205ENST00000589532 ANKRD31Q8N7Z5 1873 aa31.84■■■□□ 2.69
LSM7-205ENST00000589532 DALRD3Q5D0E6 543 aaKnown RBP31.83■■■□□ 2.69
LSM7-205ENST00000589532 NUDCQ9Y266 331 aa31.82■■■□□ 2.68
LSM7-205ENST00000589532 SBF1O95248 1867 aa31.82■■■□□ 2.68
LSM7-205ENST00000589532 KCNQ3O43525 872 aa31.81■■■□□ 2.68
LSM7-205ENST00000589532 FMNL2Q96PY5 1086 aa31.81■■■□□ 2.68
LSM7-205ENST00000589532 TEX13AQ9BXU3 409 aaPredicted RBP31.81■■■□□ 2.68
LSM7-205ENST00000589532 COL11A2P13942 1736 aaPredicted RBP31.8■■■□□ 2.68
LSM7-205ENST00000589532 SERPINB2P05120 415 aa31.79■■■□□ 2.68
LSM7-205ENST00000589532 U2AF1L5P0DN76 240 aaPredicted RBP31.79■■■□□ 2.68
LSM7-205ENST00000589532 U2AF1Q01081 240 aaKnown RBP eCLIP31.79■■■□□ 2.68
LSM7-205ENST00000589532 A0A087WZG4 1122 aa31.78■■■□□ 2.68
LSM7-205ENST00000589532 IL6STP40189 918 aaPredicted RBP31.78■■■□□ 2.68
LSM7-205ENST00000589532 BTBD11A6QL63 1104 aa31.77■■■□□ 2.68
LSM7-205ENST00000589532 C9orf131Q5VYM1 1079 aa31.76■■■□□ 2.67
LSM7-205ENST00000589532 DLG5Q8TDM6 1919 aa31.75■■■□□ 2.67
LSM7-205ENST00000589532 TBC1D9BQ66K14 1250 aa31.74■■■□□ 2.67
LSM7-205ENST00000589532 MCM10Q7L590 875 aa31.74■■■□□ 2.67
LSM7-205ENST00000589532 LAMB4A4D0S4 1761 aa31.73■■■□□ 2.67
LSM7-205ENST00000589532 A1BGP04217 495 aa31.73■■■□□ 2.67
LSM7-205ENST00000589532 HSPA6P17066 643 aa31.73■■■□□ 2.67
LSM7-205ENST00000589532 KDM3BQ7LBC6 1761 aa31.72■■■□□ 2.67
LSM7-205ENST00000589532 CAMTA2O94983 1202 aa31.71■■■□□ 2.67
LSM7-205ENST00000589532 TBC1D2BQ9UPU7 963 aa31.71■■■□□ 2.67
LSM7-205ENST00000589532 TNRC6CQ9HCJ0 1690 aaKnown RBP31.7■■■□□ 2.67
LSM7-205ENST00000589532 PRAMEF22A3QJZ6 481 aa31.7■■■□□ 2.67
LSM7-205ENST00000589532 HTATSF1O43719 755 aaKnown RBP31.7■■■□□ 2.67
LSM7-205ENST00000589532 BICDL1Q6ZP65 573 aa31.7■■■□□ 2.67
LSM7-205ENST00000589532 NMRK2Q9NPI5 230 aa31.7■■■□□ 2.67
LSM7-205ENST00000589532 DCTN1Q14203 1278 aa31.69■■■□□ 2.66
LSM7-205ENST00000589532 USP16Q9Y5T5 823 aa31.69■■■□□ 2.66
LSM7-205ENST00000589532 TIAM2Q8IVF5 1701 aa31.69■■■□□ 2.66
LSM7-205ENST00000589532 PRR5LQ6MZQ0 368 aa31.68■■■□□ 2.66
LSM7-205ENST00000589532 RTF1Q92541 710 aaKnown RBP31.68■■■□□ 2.66
LSM7-205ENST00000589532 RNF181Q9P0P0 153 aa31.67■■■□□ 2.66
LSM7-205ENST00000589532 ZNF330Q9Y3S2 320 aaPredicted RBP31.67■■■□□ 2.66
LSM7-205ENST00000589532 PRELPP51888 382 aa31.66■■■□□ 2.66
LSM7-205ENST00000589532 RASSF7Q02833 373 aa31.66■■■□□ 2.66
LSM7-205ENST00000589532 C2CD5Q86YS7 1000 aa31.66■■■□□ 2.66
LSM7-205ENST00000589532 ARFGEF2Q9Y6D5 1785 aa31.66■■■□□ 2.66
LSM7-205ENST00000589532 TOMM70O94826 608 aa31.64■■■□□ 2.66
LSM7-205ENST00000589532 SNRPA1P09661 255 aaKnown RBP31.64■■■□□ 2.66
LSM7-205ENST00000589532 TTLL6Q8N841 843 aa31.64■■■□□ 2.66
LSM7-205ENST00000589532 PIP4K2AP48426 406 aaPredicted RBP31.63■■■□□ 2.65
LSM7-205ENST00000589532 PLEKHF1Q96S99 279 aa31.63■■■□□ 2.65
LSM7-205ENST00000589532 BRIP1Q9BX63 1249 aa31.63■■■□□ 2.65
LSM7-205ENST00000589532 ZC3H4Q9UPT8 1303 aaKnown RBP31.63■■■□□ 2.65
LSM7-205ENST00000589532 H0YIN7 160 aa31.62■■■□□ 2.65
LSM7-205ENST00000589532 FER1L6Q2WGJ9 1857 aa31.62■■■□□ 2.65
LSM7-205ENST00000589532 DZIP3Q86Y13 1208 aaKnown RBP31.62■■■□□ 2.65
LSM7-205ENST00000589532 NBPF26B4DH59 902 aa31.6■■■□□ 2.65
LSM7-205ENST00000589532 NFKBIEO00221 500 aa31.6■■■□□ 2.65
LSM7-205ENST00000589532 NBPF10Q6P3W6 841 aaKnown RBP31.6■■■□□ 2.65
LSM7-205ENST00000589532 NBPF15Q8N660 670 aa31.6■■■□□ 2.65
LSM7-205ENST00000589532 CCDC88AQ3V6T2 1871 aa31.6■■■□□ 2.65
LSM7-205ENST00000589532 CCDC24Q8N4L8 307 aa31.59■■■□□ 2.65
LSM7-205ENST00000589532 PDZRN3Q9UPQ7 1066 aa31.59■■■□□ 2.65
LSM7-205ENST00000589532 TAF7Q15545 349 aaPredicted RBP31.58■■■□□ 2.65
LSM7-205ENST00000589532 CACNA1SQ13698 1873 aa31.58■■■□□ 2.65
LSM7-205ENST00000589532 KDM2BQ8NHM5 1336 aa31.57■■■□□ 2.64
LSM7-205ENST00000589532 LMNB1P20700 586 aa31.57■■■□□ 2.64
LSM7-205ENST00000589532 PDE6BP35913 854 aa31.57■■■□□ 2.64
LSM7-205ENST00000589532 CNBD1Q8NA66 436 aa31.57■■■□□ 2.64
LSM7-205ENST00000589532 SETDB2Q96T68 719 aa31.57■■■□□ 2.64
LSM7-205ENST00000589532 RGL2O15211 777 aa31.56■■■□□ 2.64
LSM7-205ENST00000589532 DICER1Q9UPY3 1922 aaKnown RBP31.55■■■□□ 2.64
LSM7-205ENST00000589532 WDR90Q96KV7 1748 aa31.55■■■□□ 2.64
LSM7-205ENST00000589532 SLX4Q8IY92 1834 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms