RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
RANBP3-216ENST00000589353 GNAI3P08754 354 aa12.59□□□□□ -0.39
RANBP3-216ENST00000589353 PIGBQ92521 554 aa12.59□□□□□ -0.39
RANBP3-216ENST00000589353 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
RANBP3-216ENST00000589353 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
RANBP3-216ENST00000589353 BCL9O00512 1426 aa12.58□□□□□ -0.4
RANBP3-216ENST00000589353 RGS12O14924 1447 aa12.58□□□□□ -0.4
RANBP3-216ENST00000589353 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.4
RANBP3-216ENST00000589353 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
RANBP3-216ENST00000589353 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
RANBP3-216ENST00000589353 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
RANBP3-216ENST00000589353 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
RANBP3-216ENST00000589353 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
RANBP3-216ENST00000589353 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
RANBP3-216ENST00000589353 ITGB4P16144 1822 aa12.58□□□□□ -0.4
RANBP3-216ENST00000589353 LAMB4A4D0S4 1761 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
RANBP3-216ENST00000589353 STARD3NLO95772 234 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
RANBP3-216ENST00000589353 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
RANBP3-216ENST00000589353 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 TOGARAM1Q9Y4F4 1720 aa12.57□□□□□ -0.4
RANBP3-216ENST00000589353 ATRNO75882 1429 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 F6X3S4 739 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 ALDH1L1O75891 902 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 NEXNQ0ZGT2 675 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
RANBP3-216ENST00000589353 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
RANBP3-216ENST00000589353 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
RANBP3-216ENST00000589353 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
RANBP3-216ENST00000589353 HMMRO75330 724 aa12.55□□□□□ -0.4
RANBP3-216ENST00000589353 MYL6BP14649 208 aa12.55□□□□□ -0.4
RANBP3-216ENST00000589353 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
RANBP3-216ENST00000589353 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
RANBP3-216ENST00000589353 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
RANBP3-216ENST00000589353 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
RANBP3-216ENST00000589353 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
RANBP3-216ENST00000589353 C5P01031 1676 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
RANBP3-216ENST00000589353 IGHDP01880 384 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 ANXA1P04083 346 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 GNAI2P04899 355 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 AIMP1Q12904 312 aaKnown RBP12.54□□□□□ -0.4
RANBP3-216ENST00000589353 PDIA6Q15084 440 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
RANBP3-216ENST00000589353 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
RANBP3-216ENST00000589353 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-216ENST00000589353 UBTFL1P0CB47 393 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-216ENST00000589353 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
RANBP3-216ENST00000589353 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
RANBP3-216ENST00000589353 LINS1Q8NG48 757 aa12.53□□□□□ -0.4
RANBP3-216ENST00000589353 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
RANBP3-216ENST00000589353 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-216ENST00000589353 IBTKQ9P2D0 1353 aaPredicted RBP12.53□□□□□ -0.4
RANBP3-216ENST00000589353 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
RANBP3-216ENST00000589353 BEND3Q5T5X7 828 aa12.52□□□□□ -0.41
RANBP3-216ENST00000589353 ANKRD44Q8N8A2 993 aa12.52□□□□□ -0.41
RANBP3-216ENST00000589353 PLBD2Q8NHP8 589 aa12.52□□□□□ -0.41
RANBP3-216ENST00000589353 ACSBG1Q96GR2 724 aa12.52□□□□□ -0.41
RANBP3-216ENST00000589353 ADCY9O60503 1353 aa12.52□□□□□ -0.41
RANBP3-216ENST00000589353 HMGB2P26583 209 aaKnown RBP12.51□□□□□ -0.41
RANBP3-216ENST00000589353 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
RANBP3-216ENST00000589353 MEIS3Q99687 375 aa12.51□□□□□ -0.41
RANBP3-216ENST00000589353 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-216ENST00000589353 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
RANBP3-216ENST00000589353 GLI3P10071 1580 aa12.51□□□□□ -0.41
RANBP3-216ENST00000589353 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
RANBP3-216ENST00000589353 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
RANBP3-216ENST00000589353 A1BGP04217 495 aa12.49□□□□□ -0.41
RANBP3-216ENST00000589353 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
RANBP3-216ENST00000589353 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
RANBP3-216ENST00000589353 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
RANBP3-216ENST00000589353 USP44Q9H0E7 712 aa12.49□□□□□ -0.41
RANBP3-216ENST00000589353 C1orf115Q9H7X2 142 aa12.49□□□□□ -0.41
RANBP3-216ENST00000589353 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
RANBP3-216ENST00000589353 ATP6V1AP38606 617 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 SIK1P57059 783 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
RANBP3-216ENST00000589353 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
RANBP3-216ENST00000589353 LRP10Q7Z4F1 713 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
RANBP3-216ENST00000589353 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
RANBP3-216ENST00000589353 FAM196AQ6ZSG2 479 aa12.47□□□□□ -0.41
RANBP3-216ENST00000589353 MYD88Q99836 296 aa12.47□□□□□ -0.41
RANBP3-216ENST00000589353 GRM8O00222 908 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms