RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 IL17REQ8NFR9 667 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
APOC1-204ENST00000589078 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
APOC1-204ENST00000589078 MRC1P22897 1456 aa12.73□□□□□ -0.37
APOC1-204ENST00000589078 TGFB2P61812 414 aa12.73□□□□□ -0.37
APOC1-204ENST00000589078 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
APOC1-204ENST00000589078 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
APOC1-204ENST00000589078 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
APOC1-204ENST00000589078 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
APOC1-204ENST00000589078 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
APOC1-204ENST00000589078 DPEP1P16444 411 aa12.72□□□□□ -0.37
APOC1-204ENST00000589078 MCM10Q7L590 875 aa12.72□□□□□ -0.37
APOC1-204ENST00000589078 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
APOC1-204ENST00000589078 TNS4Q8IZW8 715 aa12.72□□□□□ -0.37
APOC1-204ENST00000589078 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
APOC1-204ENST00000589078 RIPK4P57078 832 aa12.71□□□□□ -0.37
APOC1-204ENST00000589078 FSTL1Q12841 308 aa12.71□□□□□ -0.37
APOC1-204ENST00000589078 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
APOC1-204ENST00000589078 TMPOP42166 694 aaKnown RBP12.7□□□□□ -0.38
APOC1-204ENST00000589078 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
APOC1-204ENST00000589078 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
APOC1-204ENST00000589078 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
APOC1-204ENST00000589078 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 PRELPP51888 382 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 TAF7Q15545 349 aaPredicted RBP12.69□□□□□ -0.38
APOC1-204ENST00000589078 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 NLGN1Q8N2Q7 840 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 RTCBQ9Y3I0 505 aaKnown RBP12.69□□□□□ -0.38
APOC1-204ENST00000589078 SBF1O95248 1867 aa12.69□□□□□ -0.38
APOC1-204ENST00000589078 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
APOC1-204ENST00000589078 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
APOC1-204ENST00000589078 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
APOC1-204ENST00000589078 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
APOC1-204ENST00000589078 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 STARD3NLO95772 234 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 GYS1P13807 737 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 KCNA3P22001 575 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 SLC4A9Q96Q91 983 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 RNF181Q9P0P0 153 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
APOC1-204ENST00000589078 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
APOC1-204ENST00000589078 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
APOC1-204ENST00000589078 TIAM2Q8IVF5 1701 aa12.66□□□□□ -0.38
APOC1-204ENST00000589078 ADRA2BP18089 450 aa12.66□□□□□ -0.38
APOC1-204ENST00000589078 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
APOC1-204ENST00000589078 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
APOC1-204ENST00000589078 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
APOC1-204ENST00000589078 RRAGCQ9HB90 399 aa12.66□□□□□ -0.38
APOC1-204ENST00000589078 APAF1O14727 1248 aa12.65□□□□□ -0.38
APOC1-204ENST00000589078 RFC4P35249 363 aa12.65□□□□□ -0.38
APOC1-204ENST00000589078 DNAJC10Q8IXB1 793 aa12.65□□□□□ -0.38
APOC1-204ENST00000589078 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
APOC1-204ENST00000589078 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
APOC1-204ENST00000589078 PIM2Q9P1W9 311 aa12.65□□□□□ -0.38
APOC1-204ENST00000589078 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
APOC1-204ENST00000589078 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
APOC1-204ENST00000589078 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
APOC1-204ENST00000589078 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
APOC1-204ENST00000589078 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
APOC1-204ENST00000589078 TJP1Q07157 1748 aa12.64□□□□□ -0.39
APOC1-204ENST00000589078 RPS6KA4O75676 772 aa12.63□□□□□ -0.39
APOC1-204ENST00000589078 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
APOC1-204ENST00000589078 HSPA1AP0DMV8 641 aaKnown RBP12.63□□□□□ -0.39
APOC1-204ENST00000589078 HSPA1BP0DMV9 641 aaKnown RBP12.63□□□□□ -0.39
APOC1-204ENST00000589078 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
APOC1-204ENST00000589078 DIEXFQ68CQ4 756 aaKnown RBP12.63□□□□□ -0.39
APOC1-204ENST00000589078 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
APOC1-204ENST00000589078 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
APOC1-204ENST00000589078 DLEC1Q9Y238 1755 aa12.62□□□□□ -0.39
APOC1-204ENST00000589078 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
APOC1-204ENST00000589078 CHRNA5P30532 468 aa12.62□□□□□ -0.39
APOC1-204ENST00000589078 KCNQ3O43525 872 aa12.61□□□□□ -0.39
APOC1-204ENST00000589078 DDR1Q08345 913 aa12.61□□□□□ -0.39
APOC1-204ENST00000589078 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
APOC1-204ENST00000589078 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
APOC1-204ENST00000589078 SRP68Q9UHB9 627 aaKnown RBP12.61□□□□□ -0.39
APOC1-204ENST00000589078 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
APOC1-204ENST00000589078 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
APOC1-204ENST00000589078 A0A087WZG4 1122 aa12.6□□□□□ -0.39
APOC1-204ENST00000589078 RASSF7Q02833 373 aa12.6□□□□□ -0.39
APOC1-204ENST00000589078 FKBP8Q14318 412 aa12.6□□□□□ -0.39
APOC1-204ENST00000589078 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
APOC1-204ENST00000589078 INTS5Q6P9B9 1019 aaKnown RBP12.6□□□□□ -0.39
APOC1-204ENST00000589078 LAS1LQ9Y4W2 734 aaKnown RBP12.6□□□□□ -0.39
APOC1-204ENST00000589078 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
APOC1-204ENST00000589078 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
APOC1-204ENST00000589078 ZPR1O75312 459 aa12.59□□□□□ -0.39
APOC1-204ENST00000589078 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
APOC1-204ENST00000589078 NGEFQ8N5V2 710 aa12.59□□□□□ -0.39
APOC1-204ENST00000589078 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
APOC1-204ENST00000589078 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
APOC1-204ENST00000589078 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms