RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 NHSQ6T4R5 1651 aa18.51■□□□□ 0.55
NPC1-207ENST00000588867 PALLDQ8WX93 1383 aa18.51■□□□□ 0.55
NPC1-207ENST00000588867 TRIM37O94972 964 aa18.5■□□□□ 0.55
NPC1-207ENST00000588867 ATF7IPQ6VMQ6 1270 aa18.5■□□□□ 0.55
NPC1-207ENST00000588867 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
NPC1-207ENST00000588867 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
NPC1-207ENST00000588867 TEX13AQ9BXU3 409 aaPredicted RBP18.5■□□□□ 0.55
NPC1-207ENST00000588867 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
NPC1-207ENST00000588867 BTAF1O14981 1849 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 LOC102724428A0A0B4J2F2 783 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 TRIM27P14373 513 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 MYL6BP14649 208 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 PIP4K2AP48426 406 aaPredicted RBP18.49■□□□□ 0.55
NPC1-207ENST00000588867 SIK1P57059 783 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
NPC1-207ENST00000588867 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
NPC1-207ENST00000588867 CACNA1FO60840 1977 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 PROSER3Q2NL68 480 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
NPC1-207ENST00000588867 FLIIQ13045 1269 aa18.48■□□□□ 0.55
NPC1-207ENST00000588867 PDE3AQ14432 1141 aa18.48■□□□□ 0.55
NPC1-207ENST00000588867 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
NPC1-207ENST00000588867 DDX21Q9NR30 783 aaKnown RBP eCLIP18.48■□□□□ 0.55
NPC1-207ENST00000588867 STARD3NLO95772 234 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 A1BGP04217 495 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 MS4A1P11836 297 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
NPC1-207ENST00000588867 PDIA6Q15084 440 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
NPC1-207ENST00000588867 PTPRCP08575 1304 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
NPC1-207ENST00000588867 RLBP1P12271 317 aa18.46■□□□□ 0.55
NPC1-207ENST00000588867 CRBNQ96SW2 442 aa18.46■□□□□ 0.55
NPC1-207ENST00000588867 KCNQ4P56696 695 aa18.45■□□□□ 0.54
NPC1-207ENST00000588867 AIMP1Q12904 312 aaKnown RBP18.45■□□□□ 0.54
NPC1-207ENST00000588867 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
NPC1-207ENST00000588867 COG6Q9Y2V7 657 aa18.45■□□□□ 0.54
NPC1-207ENST00000588867 CYP19A1P11511 503 aaPredicted RBP18.44■□□□□ 0.54
NPC1-207ENST00000588867 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
NPC1-207ENST00000588867 ITPK1Q13572 414 aa18.44■□□□□ 0.54
NPC1-207ENST00000588867 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
NPC1-207ENST00000588867 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
NPC1-207ENST00000588867 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
NPC1-207ENST00000588867 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
NPC1-207ENST00000588867 F6X3S4 739 aa18.43■□□□□ 0.54
NPC1-207ENST00000588867 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
NPC1-207ENST00000588867 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
NPC1-207ENST00000588867 TJP1Q07157 1748 aa18.42■□□□□ 0.54
NPC1-207ENST00000588867 SLC4A10Q6U841 1118 aa18.42■□□□□ 0.54
NPC1-207ENST00000588867 COPS6Q7L5N1 327 aa18.42■□□□□ 0.54
NPC1-207ENST00000588867 XAGE3Q8WTP9 111 aa18.42■□□□□ 0.54
NPC1-207ENST00000588867 CCNL1Q9UK58 526 aaPredicted RBP18.42■□□□□ 0.54
NPC1-207ENST00000588867 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
NPC1-207ENST00000588867 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
NPC1-207ENST00000588867 DDX58O95786 925 aaKnown RBP18.4■□□□□ 0.54
NPC1-207ENST00000588867 APBA3O96018 575 aa18.4■□□□□ 0.54
NPC1-207ENST00000588867 LRP10Q7Z4F1 713 aa18.4■□□□□ 0.54
NPC1-207ENST00000588867 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
NPC1-207ENST00000588867 ABCC4O15439 1325 aa18.39■□□□□ 0.54
NPC1-207ENST00000588867 EP400Q96L91 3159 aa18.39■□□□□ 0.53
NPC1-207ENST00000588867 CRKLP46109 303 aaKnown RBP18.39■□□□□ 0.53
NPC1-207ENST00000588867 MVPQ14764 893 aaKnown RBP18.39■□□□□ 0.53
NPC1-207ENST00000588867 ARXQ96QS3 562 aa18.39■□□□□ 0.53
NPC1-207ENST00000588867 ZBTB1Q9Y2K1 713 aa18.39■□□□□ 0.53
NPC1-207ENST00000588867 RIC3Q7Z5B4 369 aa18.39■□□□□ 0.53
NPC1-207ENST00000588867 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
NPC1-207ENST00000588867 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
NPC1-207ENST00000588867 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
NPC1-207ENST00000588867 KSR2Q6VAB6 950 aa18.38■□□□□ 0.53
NPC1-207ENST00000588867 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
NPC1-207ENST00000588867 LY75O60449 1722 aa18.37■□□□□ 0.53
NPC1-207ENST00000588867 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
NPC1-207ENST00000588867 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
NPC1-207ENST00000588867 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
NPC1-207ENST00000588867 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
NPC1-207ENST00000588867 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
NPC1-207ENST00000588867 INTS3Q68E01 1043 aaKnown RBP18.36■□□□□ 0.53
NPC1-207ENST00000588867 TTLL7Q6ZT98 887 aa18.36■□□□□ 0.53
NPC1-207ENST00000588867 DDX19BQ9UMR2 479 aa18.36■□□□□ 0.53
NPC1-207ENST00000588867 ADCY9O60503 1353 aa18.36■□□□□ 0.53
NPC1-207ENST00000588867 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
NPC1-207ENST00000588867 CCT4P50991 539 aaKnown RBP18.35■□□□□ 0.53
NPC1-207ENST00000588867 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
NPC1-207ENST00000588867 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
NPC1-207ENST00000588867 COL5A3P25940 1745 aaPredicted RBP18.34■□□□□ 0.53
NPC1-207ENST00000588867 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
NPC1-207ENST00000588867 PLSCR1O15162 318 aa18.33■□□□□ 0.53
NPC1-207ENST00000588867 TXNRD1Q16881 649 aa18.33■□□□□ 0.53
NPC1-207ENST00000588867 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.53
NPC1-207ENST00000588867 PLBD2Q8NHP8 589 aa18.33■□□□□ 0.53
NPC1-207ENST00000588867 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.53
NPC1-207ENST00000588867 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
NPC1-207ENST00000588867 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
NPC1-207ENST00000588867 PPP4R2Q9NY27 417 aa18.32■□□□□ 0.52
NPC1-207ENST00000588867 CNTNAP4Q9C0A0 1308 aa18.32■□□□□ 0.52
NPC1-207ENST00000588867 EIF5P55010 431 aaKnown RBP18.32■□□□□ 0.52
NPC1-207ENST00000588867 PROM2Q8N271 834 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms