RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
RPRD1A-206ENST00000588459 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
RPRD1A-206ENST00000588459 FKBP8Q14318 412 aa18.22■□□□□ 0.51
RPRD1A-206ENST00000588459 FMNL2Q96PY5 1086 aa18.22■□□□□ 0.51
RPRD1A-206ENST00000588459 KIF13BQ9NQT8 1826 aa18.21■□□□□ 0.51
RPRD1A-206ENST00000588459 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
RPRD1A-206ENST00000588459 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
RPRD1A-206ENST00000588459 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 ZPR1O75312 459 aa18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 STARD3NLO95772 234 aa18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 NFE2L2Q16236 605 aa18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 PARP3Q9Y6F1 533 aa18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 C10orf71Q711Q0 1435 aa18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
RPRD1A-206ENST00000588459 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
RPRD1A-206ENST00000588459 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
RPRD1A-206ENST00000588459 DDR1Q08345 913 aa18.18■□□□□ 0.5
RPRD1A-206ENST00000588459 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
RPRD1A-206ENST00000588459 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
RPRD1A-206ENST00000588459 PXDNLA1KZ92 1463 aa18.18■□□□□ 0.5
RPRD1A-206ENST00000588459 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-206ENST00000588459 TEX13AQ9BXU3 409 aaPredicted RBP18.17■□□□□ 0.5
RPRD1A-206ENST00000588459 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
RPRD1A-206ENST00000588459 NARFQ9UHQ1 456 aa18.17■□□□□ 0.5
RPRD1A-206ENST00000588459 A1BGP04217 495 aa18.16■□□□□ 0.5
RPRD1A-206ENST00000588459 EIF5P55010 431 aaKnown RBP18.16■□□□□ 0.5
RPRD1A-206ENST00000588459 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
RPRD1A-206ENST00000588459 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
RPRD1A-206ENST00000588459 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
RPRD1A-206ENST00000588459 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
RPRD1A-206ENST00000588459 GRIN3BO60391 1043 aa18.15■□□□□ 0.5
RPRD1A-206ENST00000588459 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
RPRD1A-206ENST00000588459 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
RPRD1A-206ENST00000588459 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
RPRD1A-206ENST00000588459 USP16Q9Y5T5 823 aa18.15■□□□□ 0.5
RPRD1A-206ENST00000588459 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.5
RPRD1A-206ENST00000588459 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
RPRD1A-206ENST00000588459 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
RPRD1A-206ENST00000588459 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
RPRD1A-206ENST00000588459 TM4SF1P30408 202 aa18.13■□□□□ 0.49
RPRD1A-206ENST00000588459 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
RPRD1A-206ENST00000588459 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 A0A087WZG4 1122 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 DPEP1P16444 411 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 RIPK4P57078 832 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 TGFB2P61812 414 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 NFIXQ14938 502 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
RPRD1A-206ENST00000588459 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
RPRD1A-206ENST00000588459 ZNF784Q8NCA9 323 aaPredicted RBP18.11■□□□□ 0.49
RPRD1A-206ENST00000588459 RRP7AQ9Y3A4 280 aaKnown RBP18.11■□□□□ 0.49
RPRD1A-206ENST00000588459 BCORQ6W2J9 1755 aa18.11■□□□□ 0.49
RPRD1A-206ENST00000588459 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
RPRD1A-206ENST00000588459 NRXN2Q9P2S2 1712 aa18.1■□□□□ 0.49
RPRD1A-206ENST00000588459 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
RPRD1A-206ENST00000588459 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
RPRD1A-206ENST00000588459 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
RPRD1A-206ENST00000588459 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
RPRD1A-206ENST00000588459 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
RPRD1A-206ENST00000588459 SERPINB2P05120 415 aa18.08■□□□□ 0.48
RPRD1A-206ENST00000588459 TBC1D9BQ66K14 1250 aa18.08■□□□□ 0.48
RPRD1A-206ENST00000588459 DZIP3Q86Y13 1208 aaKnown RBP18.08■□□□□ 0.48
RPRD1A-206ENST00000588459 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
RPRD1A-206ENST00000588459 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
RPRD1A-206ENST00000588459 CHRNA5P30532 468 aa18.07■□□□□ 0.48
RPRD1A-206ENST00000588459 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-206ENST00000588459 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
RPRD1A-206ENST00000588459 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 KCNA3P22001 575 aa18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 TSPYL4Q9UJ04 414 aa18.06■□□□□ 0.48
RPRD1A-206ENST00000588459 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
RPRD1A-206ENST00000588459 ARFGEF1Q9Y6D6 1849 aa18.04■□□□□ 0.48
RPRD1A-206ENST00000588459 ANKRD31Q8N7Z5 1873 aa18.03■□□□□ 0.48
RPRD1A-206ENST00000588459 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
RPRD1A-206ENST00000588459 PIM2Q9P1W9 311 aa18.03■□□□□ 0.48
RPRD1A-206ENST00000588459 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.48
RPRD1A-206ENST00000588459 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
RPRD1A-206ENST00000588459 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.48
RPRD1A-206ENST00000588459 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
RPRD1A-206ENST00000588459 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
RPRD1A-206ENST00000588459 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
RPRD1A-206ENST00000588459 ATP10DQ9P241 1426 aa18■□□□□ 0.47
RPRD1A-206ENST00000588459 MYL6BP14649 208 aa18■□□□□ 0.47
RPRD1A-206ENST00000588459 PRR5LQ6MZQ0 368 aa18■□□□□ 0.47
RPRD1A-206ENST00000588459 ARHGAP27Q6ZUM4 889 aa18■□□□□ 0.47
RPRD1A-206ENST00000588459 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
RPRD1A-206ENST00000588459 COL11A2P13942 1736 aaPredicted RBP18■□□□□ 0.47
RPRD1A-206ENST00000588459 NPHP1O15259 732 aa17.99■□□□□ 0.47
RPRD1A-206ENST00000588459 C2CD5Q86YS7 1000 aa17.99■□□□□ 0.47
RPRD1A-206ENST00000588459 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
RPRD1A-206ENST00000588459 ADCY9O60503 1353 aa17.99■□□□□ 0.47
RPRD1A-206ENST00000588459 HLFQ16534 295 aa17.98■□□□□ 0.47
RPRD1A-206ENST00000588459 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
RPRD1A-206ENST00000588459 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms