RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 KIAA1551Q9HCM1 1747 aa27.81■■■□□ 2.04
NCLN-204ENST00000588428 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
NCLN-204ENST00000588428 DCTN1Q14203 1278 aa27.79■■■□□ 2.04
NCLN-204ENST00000588428 C10orf71Q711Q0 1435 aa27.78■■■□□ 2.04
NCLN-204ENST00000588428 KCNQ3O43525 872 aa27.78■■■□□ 2.04
NCLN-204ENST00000588428 GPR162Q16538 588 aa27.78■■■□□ 2.04
NCLN-204ENST00000588428 SRP68Q9UHB9 627 aaKnown RBP27.78■■■□□ 2.04
NCLN-204ENST00000588428 YY1P25490 414 aa27.77■■■□□ 2.04
NCLN-204ENST00000588428 TAF7Q15545 349 aaPredicted RBP27.77■■■□□ 2.04
NCLN-204ENST00000588428 NARFQ9UHQ1 456 aa27.77■■■□□ 2.04
NCLN-204ENST00000588428 LAMB4A4D0S4 1761 aa27.76■■■□□ 2.03
NCLN-204ENST00000588428 SCN7AQ01118 1682 aa27.76■■■□□ 2.03
NCLN-204ENST00000588428 EIF5P55010 431 aaKnown RBP27.76■■■□□ 2.03
NCLN-204ENST00000588428 ZPR1O75312 459 aa27.75■■■□□ 2.03
NCLN-204ENST00000588428 FKBP8Q14318 412 aa27.75■■■□□ 2.03
NCLN-204ENST00000588428 UTRNP46939 3433 aa27.74■■■□□ 2.03
NCLN-204ENST00000588428 PARP3Q9Y6F1 533 aa27.74■■■□□ 2.03
NCLN-204ENST00000588428 NRXN2Q9P2S2 1712 aa27.74■■■□□ 2.03
NCLN-204ENST00000588428 BRCA1P38398 1863 aaKnown RBP27.74■■■□□ 2.03
NCLN-204ENST00000588428 A0A087WZG4 1122 aa27.73■■■□□ 2.03
NCLN-204ENST00000588428 PNISRQ8TF01 805 aaKnown RBP27.73■■■□□ 2.03
NCLN-204ENST00000588428 AFDNP55196 1824 aaKnown RBP27.73■■■□□ 2.03
NCLN-204ENST00000588428 N4BP2Q86UW6 1770 aaPredicted RBP27.73■■■□□ 2.03
NCLN-204ENST00000588428 SNRPA1P09661 255 aaKnown RBP27.72■■■□□ 2.03
NCLN-204ENST00000588428 YBX3P16989 372 aaKnown RBP eCLIP27.72■■■□□ 2.032e-7■■□□□ 11.4
NCLN-204ENST00000588428 CANXP27824 592 aaKnown RBP27.72■■■□□ 2.03
NCLN-204ENST00000588428 TM4SF1P30408 202 aa27.72■■■□□ 2.03
NCLN-204ENST00000588428 IL6STP40189 918 aaPredicted RBP27.72■■■□□ 2.03
NCLN-204ENST00000588428 USPL1Q5W0Q7 1092 aa27.72■■■□□ 2.03
NCLN-204ENST00000588428 PXDNLA1KZ92 1463 aa27.71■■■□□ 2.03
NCLN-204ENST00000588428 BCORQ6W2J9 1755 aa27.71■■■□□ 2.03
NCLN-204ENST00000588428 GRIN3BO60391 1043 aa27.71■■■□□ 2.03
NCLN-204ENST00000588428 TGFB2P61812 414 aa27.7■■■□□ 2.02
NCLN-204ENST00000588428 DDR1Q08345 913 aa27.7■■■□□ 2.02
NCLN-204ENST00000588428 GOLGB1Q14789 3259 aaKnown RBP27.7■■■□□ 2.02
NCLN-204ENST00000588428 PELP1Q8IZL8 1130 aaKnown RBP27.69■■■□□ 2.02
NCLN-204ENST00000588428 WDR43Q15061 677 aaKnown RBP eCLIP27.68■■■□□ 2.02
NCLN-204ENST00000588428 BCL2L12Q9HB09 334 aa27.68■■■□□ 2.02
NCLN-204ENST00000588428 USP16Q9Y5T5 823 aa27.68■■■□□ 2.02
NCLN-204ENST00000588428 POLRMTO00411 1230 aaKnown RBP27.67■■■□□ 2.02
NCLN-204ENST00000588428 TMPOP42166 694 aaKnown RBP27.67■■■□□ 2.02
NCLN-204ENST00000588428 LMOD3Q0VAK6 560 aa27.67■■■□□ 2.02
NCLN-204ENST00000588428 ZNF316A6NFI3 1004 aaPredicted RBP27.66■■■□□ 2.02
NCLN-204ENST00000588428 A1BGP04217 495 aa27.66■■■□□ 2.02
NCLN-204ENST00000588428 RIPK4P57078 832 aa27.66■■■□□ 2.02
NCLN-204ENST00000588428 RUNDC1Q96C34 613 aa27.65■■■□□ 2.02
NCLN-204ENST00000588428 THUMPD2Q9BTF0 503 aaKnown RBP27.65■■■□□ 2.02
NCLN-204ENST00000588428 PRAMEF22A3QJZ6 481 aa27.64■■■□□ 2.02
NCLN-204ENST00000588428 NFIXQ14938 502 aa27.64■■■□□ 2.02
NCLN-204ENST00000588428 BABAM1Q9NWV8 329 aa27.64■■■□□ 2.02
NCLN-204ENST00000588428 ARFGEF1Q9Y6D6 1849 aa27.63■■■□□ 2.01
NCLN-204ENST00000588428 MIS18AQ9NYP9 233 aa27.63■■■□□ 2.01
NCLN-204ENST00000588428 ADAMTS8Q9UP79 889 aa27.63■■■□□ 2.01
NCLN-204ENST00000588428 EIF4A1P60842 406 aaKnown RBP27.62■■■□□ 2.01
NCLN-204ENST00000588428 NPM2Q86SE8 214 aaKnown RBP27.61■■■□□ 2.01
NCLN-204ENST00000588428 DLEC1Q9Y238 1755 aa27.6■■■□□ 2.01
NCLN-204ENST00000588428 GIGYF1O75420 1035 aaPredicted RBP27.6■■■□□ 2.01
NCLN-204ENST00000588428 CCDC146Q8IYE0 955 aa27.6■■■□□ 2.01
NCLN-204ENST00000588428 RGL2O15211 777 aa27.59■■■□□ 2.01
NCLN-204ENST00000588428 CAMTA2O94983 1202 aa27.59■■■□□ 2.01
NCLN-204ENST00000588428 TBC1D2BQ9UPU7 963 aa27.58■■■□□ 2.01
NCLN-204ENST00000588428 ZNF330Q9Y3S2 320 aaPredicted RBP27.58■■■□□ 2.01
NCLN-204ENST00000588428 A0A0G2JLW4 131 aa27.57■■■□□ 2
NCLN-204ENST00000588428 NBPF26B4DH59 902 aa27.57■■■□□ 2
NCLN-204ENST00000588428 DPEP1P16444 411 aa27.57■■■□□ 2
NCLN-204ENST00000588428 NBPF10Q6P3W6 841 aaKnown RBP27.57■■■□□ 2
NCLN-204ENST00000588428 NBPF15Q8N660 670 aa27.57■■■□□ 2
NCLN-204ENST00000588428 SERPINB2P05120 415 aa27.56■■■□□ 2
NCLN-204ENST00000588428 KCNA3P22001 575 aa27.56■■■□□ 2
NCLN-204ENST00000588428 DZIP3Q86Y13 1208 aaKnown RBP27.56■■■□□ 2
NCLN-204ENST00000588428 TBC1D9BQ66K14 1250 aa27.55■■■□□ 2
NCLN-204ENST00000588428 TSPYL4Q9UJ04 414 aa27.55■■■□□ 2
NCLN-204ENST00000588428 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
NCLN-204ENST00000588428 RRP7AQ9Y3A4 280 aaKnown RBP27.55■■■□□ 2
NCLN-204ENST00000588428 CARMIL3Q8ND23 1372 aa27.55■■■□□ 2
NCLN-204ENST00000588428 ANKRD31Q8N7Z5 1873 aa27.55■■■□□ 2
NCLN-204ENST00000588428 CLEC4GQ6UXB4 293 aa27.54■■■□□ 2
NCLN-204ENST00000588428 PIP4K2AP48426 406 aaPredicted RBP27.53■■■□□ 2
NCLN-204ENST00000588428 ZNF784Q8NCA9 323 aaPredicted RBP27.53■■■□□ 2
NCLN-204ENST00000588428 ERBB4Q15303 1308 aa27.52■■■□□ 2
NCLN-204ENST00000588428 NEUROD2Q15784 382 aa27.51■■□□□ 1.99
NCLN-204ENST00000588428 PIM2Q9P1W9 311 aa27.51■■□□□ 1.99
NCLN-204ENST00000588428 WWC3Q9ULE0 1092 aa27.51■■□□□ 1.99
NCLN-204ENST00000588428 NUP98P52948 1817 aa27.51■■□□□ 1.99
NCLN-204ENST00000588428 ZNF652Q9Y2D9 606 aa27.5■■□□□ 1.99
NCLN-204ENST00000588428 CHL1O00533 1208 aa27.49■■□□□ 1.99
NCLN-204ENST00000588428 BICDL1Q6ZP65 573 aa27.49■■□□□ 1.99
NCLN-204ENST00000588428 BCS1LQ9Y276 419 aa27.49■■□□□ 1.99
NCLN-204ENST00000588428 SETDB2Q96T68 719 aa27.48■■□□□ 1.99
NCLN-204ENST00000588428 ADCY9O60503 1353 aa27.48■■□□□ 1.99
NCLN-204ENST00000588428 CHRNA5P30532 468 aa27.46■■□□□ 1.99
NCLN-204ENST00000588428 PDZRN3Q9UPQ7 1066 aa27.46■■□□□ 1.99
NCLN-204ENST00000588428 COL11A2P13942 1736 aaPredicted RBP27.45■■□□□ 1.99
NCLN-204ENST00000588428 ANP32CO43423 234 aa27.45■■□□□ 1.98
NCLN-204ENST00000588428 CCDC184Q52MB2 194 aa27.45■■□□□ 1.98
NCLN-204ENST00000588428 DALRD3Q5D0E6 543 aaKnown RBP27.45■■□□□ 1.98
NCLN-204ENST00000588428 PRR5LQ6MZQ0 368 aa27.45■■□□□ 1.98
NCLN-204ENST00000588428 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
NCLN-204ENST00000588428 BRIP1Q9BX63 1249 aa27.44■■□□□ 1.98
NCLN-204ENST00000588428 APAF1O14727 1248 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms