RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 FKBP8Q14318 412 aa28.95■■■□□ 2.22
CIRBP-219ENST00000588411 ZNF784Q8NCA9 323 aaPredicted RBP28.95■■■□□ 2.22
CIRBP-219ENST00000588411 COL15A1P39059 1388 aa28.95■■■□□ 2.22
CIRBP-219ENST00000588411 C10orf71Q711Q0 1435 aa28.94■■■□□ 2.22
CIRBP-219ENST00000588411 CANXP27824 592 aaKnown RBP28.93■■■□□ 2.22
CIRBP-219ENST00000588411 MCM10Q7L590 875 aa28.93■■■□□ 2.22
CIRBP-219ENST00000588411 NARFQ9UHQ1 456 aa28.93■■■□□ 2.22
CIRBP-219ENST00000588411 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
CIRBP-219ENST00000588411 A0A087WZG4 1122 aa28.92■■■□□ 2.22
CIRBP-219ENST00000588411 USPL1Q5W0Q7 1092 aa28.92■■■□□ 2.22
CIRBP-219ENST00000588411 MAPK8IP3Q9UPT6 1336 aa28.91■■■□□ 2.22
CIRBP-219ENST00000588411 NPM2Q86SE8 214 aaKnown RBP28.9■■■□□ 2.22
CIRBP-219ENST00000588411 PXDNLA1KZ92 1463 aa28.9■■■□□ 2.22
CIRBP-219ENST00000588411 WWC3Q9ULE0 1092 aa28.89■■■□□ 2.22
CIRBP-219ENST00000588411 DDR1Q08345 913 aa28.88■■■□□ 2.21
CIRBP-219ENST00000588411 EIF5P55010 431 aaKnown RBP28.87■■■□□ 2.21
CIRBP-219ENST00000588411 DCTN1Q14203 1278 aa28.87■■■□□ 2.21
CIRBP-219ENST00000588411 KIF13BQ9NQT8 1826 aa28.87■■■□□ 2.21
CIRBP-219ENST00000588411 KCNQ3O43525 872 aa28.86■■■□□ 2.21
CIRBP-219ENST00000588411 TM4SF1P30408 202 aa28.86■■■□□ 2.21
CIRBP-219ENST00000588411 PLEKHF1Q96S99 279 aa28.86■■■□□ 2.21
CIRBP-219ENST00000588411 MYBBP1AQ9BQG0 1328 aaKnown RBP28.86■■■□□ 2.21
CIRBP-219ENST00000588411 A0A0G2JLW4 131 aa28.85■■■□□ 2.21
CIRBP-219ENST00000588411 POLRMTO00411 1230 aaKnown RBP28.85■■■□□ 2.21
CIRBP-219ENST00000588411 IL6STP40189 918 aaPredicted RBP28.85■■■□□ 2.21
CIRBP-219ENST00000588411 TAF7Q15545 349 aaPredicted RBP28.85■■■□□ 2.21
CIRBP-219ENST00000588411 NFE2L2Q16236 605 aa28.85■■■□□ 2.21
CIRBP-219ENST00000588411 ZNF330Q9Y3S2 320 aaPredicted RBP28.85■■■□□ 2.21
CIRBP-219ENST00000588411 SNRPA1P09661 255 aaKnown RBP28.84■■■□□ 2.21
CIRBP-219ENST00000588411 DPEP1P16444 411 aa28.84■■■□□ 2.21
CIRBP-219ENST00000588411 PNISRQ8TF01 805 aaKnown RBP28.83■■■□□ 2.21
CIRBP-219ENST00000588411 NFIXQ14938 502 aa28.82■■■□□ 2.2
CIRBP-219ENST00000588411 BCS1LQ9Y276 419 aa28.82■■■□□ 2.2
CIRBP-219ENST00000588411 A1BGP04217 495 aa28.8■■■□□ 2.2
CIRBP-219ENST00000588411 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
CIRBP-219ENST00000588411 BCL2L12Q9HB09 334 aa28.79■■■□□ 2.2
CIRBP-219ENST00000588411 PIM2Q9P1W9 311 aa28.78■■■□□ 2.2
CIRBP-219ENST00000588411 TBC1D2BQ9UPU7 963 aa28.77■■■□□ 2.2
CIRBP-219ENST00000588411 USP16Q9Y5T5 823 aa28.77■■■□□ 2.2
CIRBP-219ENST00000588411 KIAA1551Q9HCM1 1747 aa28.77■■■□□ 2.2
CIRBP-219ENST00000588411 N4BP2Q86UW6 1770 aaPredicted RBP28.76■■■□□ 2.19
CIRBP-219ENST00000588411 SERPINB2P05120 415 aa28.76■■■□□ 2.19
CIRBP-219ENST00000588411 BICDL1Q6ZP65 573 aa28.75■■■□□ 2.19
CIRBP-219ENST00000588411 WDR43Q15061 677 aaKnown RBP eCLIP28.74■■■□□ 2.19
CIRBP-219ENST00000588411 DALRD3Q5D0E6 543 aaKnown RBP28.74■■■□□ 2.19
CIRBP-219ENST00000588411 MIS18AQ9NYP9 233 aa28.74■■■□□ 2.19
CIRBP-219ENST00000588411 KCNA3P22001 575 aa28.73■■■□□ 2.19
CIRBP-219ENST00000588411 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
CIRBP-219ENST00000588411 DZIP3Q86Y13 1208 aaKnown RBP28.73■■■□□ 2.19
CIRBP-219ENST00000588411 PRAMEF22A3QJZ6 481 aa28.72■■■□□ 2.19
CIRBP-219ENST00000588411 ATP10DQ9P241 1426 aa28.71■■■□□ 2.19
CIRBP-219ENST00000588411 RIPK4P57078 832 aa28.71■■■□□ 2.19
CIRBP-219ENST00000588411 TBC1D9BQ66K14 1250 aa28.71■■■□□ 2.19
CIRBP-219ENST00000588411 ARHGAP27Q6ZUM4 889 aa28.71■■■□□ 2.19
CIRBP-219ENST00000588411 THUMPD2Q9BTF0 503 aaKnown RBP28.71■■■□□ 2.19
CIRBP-219ENST00000588411 DLG5Q8TDM6 1919 aa28.71■■■□□ 2.19
CIRBP-219ENST00000588411 SCN7AQ01118 1682 aa28.7■■■□□ 2.19
CIRBP-219ENST00000588411 GIGYF1O75420 1035 aaPredicted RBP28.7■■■□□ 2.18
CIRBP-219ENST00000588411 CAMTA2O94983 1202 aa28.7■■■□□ 2.18
CIRBP-219ENST00000588411 CHRNA5P30532 468 aa28.7■■■□□ 2.18
CIRBP-219ENST00000588411 ZNF652Q9Y2D9 606 aa28.7■■■□□ 2.18
CIRBP-219ENST00000588411 CARMIL3Q8ND23 1372 aa28.7■■■□□ 2.18
CIRBP-219ENST00000588411 SETDB2Q96T68 719 aa28.69■■■□□ 2.18
CIRBP-219ENST00000588411 ADCY9O60503 1353 aa28.68■■■□□ 2.18
CIRBP-219ENST00000588411 PIP4K2AP48426 406 aaPredicted RBP28.68■■■□□ 2.18
CIRBP-219ENST00000588411 PRKRIP1Q9H875 184 aaPredicted RBP28.68■■■□□ 2.18
CIRBP-219ENST00000588411 NRXN2Q9P2S2 1712 aa28.67■■■□□ 2.18
CIRBP-219ENST00000588411 NPHP1O15259 732 aa28.67■■■□□ 2.18
CIRBP-219ENST00000588411 TMPOP42166 694 aaKnown RBP28.67■■■□□ 2.18
CIRBP-219ENST00000588411 EIF4A1P60842 406 aaKnown RBP28.66■■■□□ 2.18
CIRBP-219ENST00000588411 CLEC4GQ6UXB4 293 aa28.66■■■□□ 2.18
CIRBP-219ENST00000588411 GPBP1L1Q9HC44 474 aaPredicted RBP28.66■■■□□ 2.18
CIRBP-219ENST00000588411 PDZRN3Q9UPQ7 1066 aa28.66■■■□□ 2.18
CIRBP-219ENST00000588411 BRCA1P38398 1863 aaKnown RBP28.66■■■□□ 2.18
CIRBP-219ENST00000588411 AFDNP55196 1824 aaKnown RBP28.65■■■□□ 2.18
CIRBP-219ENST00000588411 H0YIN7 160 aa28.65■■■□□ 2.18
CIRBP-219ENST00000588411 TSPYL4Q9UJ04 414 aa28.65■■■□□ 2.18
CIRBP-219ENST00000588411 RGL2O15211 777 aa28.64■■■□□ 2.18
CIRBP-219ENST00000588411 C2CD5Q86YS7 1000 aa28.64■■■□□ 2.18
CIRBP-219ENST00000588411 BABAM1Q9NWV8 329 aa28.64■■■□□ 2.18
CIRBP-219ENST00000588411 KDM3BQ7LBC6 1761 aa28.63■■■□□ 2.17
CIRBP-219ENST00000588411 NBPF26B4DH59 902 aa28.63■■■□□ 2.17
CIRBP-219ENST00000588411 NBPF10Q6P3W6 841 aaKnown RBP28.63■■■□□ 2.17
CIRBP-219ENST00000588411 CCDC146Q8IYE0 955 aa28.63■■■□□ 2.17
CIRBP-219ENST00000588411 NBPF15Q8N660 670 aa28.63■■■□□ 2.17
CIRBP-219ENST00000588411 CNBD1Q8NA66 436 aa28.63■■■□□ 2.17
CIRBP-219ENST00000588411 RUNDC1Q96C34 613 aa28.63■■■□□ 2.17
CIRBP-219ENST00000588411 PDE6BP35913 854 aa28.62■■■□□ 2.17
CIRBP-219ENST00000588411 ST5P78524 1137 aa28.62■■■□□ 2.17
CIRBP-219ENST00000588411 BRIP1Q9BX63 1249 aa28.62■■■□□ 2.17
CIRBP-219ENST00000588411 C1QTNF8P60827 252 aa28.61■■■□□ 2.17
CIRBP-219ENST00000588411 PRR5LQ6MZQ0 368 aa28.61■■■□□ 2.17
CIRBP-219ENST00000588411 LAMB4A4D0S4 1761 aa28.6■■■□□ 2.17
CIRBP-219ENST00000588411 ARFGEF1Q9Y6D6 1849 aa28.6■■■□□ 2.17
CIRBP-219ENST00000588411 TTLL6Q8N841 843 aa28.6■■■□□ 2.17
CIRBP-219ENST00000588411 ZNF526Q8TF50 670 aaPredicted RBP28.6■■■□□ 2.17
CIRBP-219ENST00000588411 NEUROD2Q15784 382 aa28.59■■■□□ 2.17
CIRBP-219ENST00000588411 ADAMTS8Q9UP79 889 aa28.59■■■□□ 2.17
CIRBP-219ENST00000588411 RRP7AQ9Y3A4 280 aaKnown RBP28.59■■■□□ 2.17
CIRBP-219ENST00000588411 BCORQ6W2J9 1755 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms