RNA–Protein interactions for RNA: ENST00000588381.1

CDIP1-212, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-212ENST00000588381 A0A0G2JLW4 131 aa23.44■■□□□ 1.34
CDIP1-212ENST00000588381 USPL1Q5W0Q7 1092 aa23.44■■□□□ 1.34
CDIP1-212ENST00000588381 RTF1Q92541 710 aaKnown RBP23.44■■□□□ 1.34
CDIP1-212ENST00000588381 FMNL2Q96PY5 1086 aa23.44■■□□□ 1.34
CDIP1-212ENST00000588381 COL15A1P39059 1388 aa23.43■■□□□ 1.34
CDIP1-212ENST00000588381 BTBD11A6QL63 1104 aa23.43■■□□□ 1.34
CDIP1-212ENST00000588381 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
CDIP1-212ENST00000588381 DDR1Q08345 913 aa23.43■■□□□ 1.34
CDIP1-212ENST00000588381 POLRMTO00411 1230 aaKnown RBP23.42■■□□□ 1.34
CDIP1-212ENST00000588381 A0A087WZG4 1122 aa23.41■■□□□ 1.34
CDIP1-212ENST00000588381 DPEP1P16444 411 aa23.41■■□□□ 1.34
CDIP1-212ENST00000588381 KCNA3P22001 575 aa23.41■■□□□ 1.34
CDIP1-212ENST00000588381 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
CDIP1-212ENST00000588381 CANXP27824 592 aaKnown RBP23.4■■□□□ 1.34
CDIP1-212ENST00000588381 WWC3Q9ULE0 1092 aa23.4■■□□□ 1.34
CDIP1-212ENST00000588381 KIAA1551Q9HCM1 1747 aa23.39■■□□□ 1.34
CDIP1-212ENST00000588381 C1QTNF8P60827 252 aa23.39■■□□□ 1.33
CDIP1-212ENST00000588381 BCS1LQ9Y276 419 aa23.39■■□□□ 1.33
CDIP1-212ENST00000588381 NEFMP07197 916 aa23.38■■□□□ 1.33
CDIP1-212ENST00000588381 IL6STP40189 918 aaPredicted RBP23.38■■□□□ 1.33
CDIP1-212ENST00000588381 NFIXQ14938 502 aa23.38■■□□□ 1.33
CDIP1-212ENST00000588381 BCL2L12Q9HB09 334 aa23.38■■□□□ 1.33
CDIP1-212ENST00000588381 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
CDIP1-212ENST00000588381 ADCY9O60503 1353 aa23.38■■□□□ 1.33
CDIP1-212ENST00000588381 GIGYF1O75420 1035 aaPredicted RBP23.37■■□□□ 1.33
CDIP1-212ENST00000588381 PNNQ9H307 717 aaKnown RBP23.37■■□□□ 1.33
CDIP1-212ENST00000588381 RALBP1Q15311 655 aa23.36■■□□□ 1.33
CDIP1-212ENST00000588381 MCM10Q7L590 875 aa23.36■■□□□ 1.33
CDIP1-212ENST00000588381 N4BP2Q86UW6 1770 aaPredicted RBP23.36■■□□□ 1.33
CDIP1-212ENST00000588381 ATP10DQ9P241 1426 aa23.35■■□□□ 1.33
CDIP1-212ENST00000588381 KCNQ3O43525 872 aa23.35■■□□□ 1.33
CDIP1-212ENST00000588381 TAF7Q15545 349 aaPredicted RBP23.34■■□□□ 1.33
CDIP1-212ENST00000588381 NPM2Q86SE8 214 aaKnown RBP23.34■■□□□ 1.33
CDIP1-212ENST00000588381 PLEKHF1Q96S99 279 aa23.34■■□□□ 1.33
CDIP1-212ENST00000588381 SERPINB2P05120 415 aa23.33■■□□□ 1.33
CDIP1-212ENST00000588381 SNRPA1P09661 255 aaKnown RBP23.33■■□□□ 1.33
CDIP1-212ENST00000588381 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
CDIP1-212ENST00000588381 A1BGP04217 495 aa23.32■■□□□ 1.32
CDIP1-212ENST00000588381 GPBP1L1Q9HC44 474 aaPredicted RBP23.32■■□□□ 1.32
CDIP1-212ENST00000588381 BRCA1P38398 1863 aaKnown RBP23.31■■□□□ 1.32
CDIP1-212ENST00000588381 DCTN1Q14203 1278 aa23.31■■□□□ 1.32
CDIP1-212ENST00000588381 ARHGAP27Q6ZUM4 889 aa23.31■■□□□ 1.32
CDIP1-212ENST00000588381 USP16Q9Y5T5 823 aa23.31■■□□□ 1.32
CDIP1-212ENST00000588381 CHRNA5P30532 468 aa23.29■■□□□ 1.32
CDIP1-212ENST00000588381 PNISRQ8TF01 805 aaKnown RBP23.29■■□□□ 1.32
CDIP1-212ENST00000588381 NRXN2Q9P2S2 1712 aa23.29■■□□□ 1.32
CDIP1-212ENST00000588381 TBC1D2BQ9UPU7 963 aa23.29■■□□□ 1.32
CDIP1-212ENST00000588381 NFE2L2Q16236 605 aa23.28■■□□□ 1.32
CDIP1-212ENST00000588381 TBC1D9BQ66K14 1250 aa23.27■■□□□ 1.32
CDIP1-212ENST00000588381 PDZRN3Q9UPQ7 1066 aa23.27■■□□□ 1.32
CDIP1-212ENST00000588381 ZNF330Q9Y3S2 320 aaPredicted RBP23.27■■□□□ 1.32
CDIP1-212ENST00000588381 RGL2O15211 777 aa23.26■■□□□ 1.31
CDIP1-212ENST00000588381 CAMTA2O94983 1202 aa23.26■■□□□ 1.31
CDIP1-212ENST00000588381 DDX10Q13206 875 aaKnown RBP23.26■■□□□ 1.31
CDIP1-212ENST00000588381 CLEC4GQ6UXB4 293 aa23.26■■□□□ 1.31
CDIP1-212ENST00000588381 ARFGEF1Q9Y6D6 1849 aa23.26■■□□□ 1.31
CDIP1-212ENST00000588381 AFDNP55196 1824 aaKnown RBP23.25■■□□□ 1.31
CDIP1-212ENST00000588381 BICDL1Q6ZP65 573 aa23.25■■□□□ 1.31
CDIP1-212ENST00000588381 SETDB2Q96T68 719 aa23.25■■□□□ 1.31
CDIP1-212ENST00000588381 MAPK8IP3Q9UPT6 1336 aa23.25■■□□□ 1.31
CDIP1-212ENST00000588381 PRAMEF22A3QJZ6 481 aa23.24■■□□□ 1.31
CDIP1-212ENST00000588381 H0YIN7 160 aa23.24■■□□□ 1.31
CDIP1-212ENST00000588381 DZIP3Q86Y13 1208 aaKnown RBP23.24■■□□□ 1.31
CDIP1-212ENST00000588381 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
CDIP1-212ENST00000588381 CARMIL3Q8ND23 1372 aa23.24■■□□□ 1.31
CDIP1-212ENST00000588381 PDE6BP35913 854 aa23.22■■□□□ 1.31
CDIP1-212ENST00000588381 TTLL6Q8N841 843 aa23.22■■□□□ 1.31
CDIP1-212ENST00000588381 ZNF526Q8TF50 670 aaPredicted RBP23.22■■□□□ 1.31
CDIP1-212ENST00000588381 MIS18AQ9NYP9 233 aa23.22■■□□□ 1.31
CDIP1-212ENST00000588381 C2CD5Q86YS7 1000 aa23.21■■□□□ 1.31
CDIP1-212ENST00000588381 ZNF652Q9Y2D9 606 aa23.21■■□□□ 1.31
CDIP1-212ENST00000588381 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
CDIP1-212ENST00000588381 MYBBP1AQ9BQG0 1328 aaKnown RBP23.2■■□□□ 1.3
CDIP1-212ENST00000588381 SENP3-EIF4A1A0A087X0R7 540 aa23.2■■□□□ 1.3
CDIP1-212ENST00000588381 NBPF26B4DH59 902 aa23.2■■□□□ 1.3
CDIP1-212ENST00000588381 PRR5LQ6MZQ0 368 aa23.2■■□□□ 1.3
CDIP1-212ENST00000588381 NBPF10Q6P3W6 841 aaKnown RBP23.2■■□□□ 1.3
CDIP1-212ENST00000588381 NBPF15Q8N660 670 aa23.2■■□□□ 1.3
CDIP1-212ENST00000588381 EIF4A1P60842 406 aaKnown RBP23.19■■□□□ 1.3
CDIP1-212ENST00000588381 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
CDIP1-212ENST00000588381 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
CDIP1-212ENST00000588381 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
CDIP1-212ENST00000588381 KIF3CO14782 793 aa23.17■■□□□ 1.3
CDIP1-212ENST00000588381 CNBD1Q8NA66 436 aa23.17■■□□□ 1.3
CDIP1-212ENST00000588381 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
CDIP1-212ENST00000588381 RIPK4P57078 832 aa23.16■■□□□ 1.3
CDIP1-212ENST00000588381 ST5P78524 1137 aa23.15■■□□□ 1.3
CDIP1-212ENST00000588381 LMOD3Q0VAK6 560 aa23.15■■□□□ 1.3
CDIP1-212ENST00000588381 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
CDIP1-212ENST00000588381 DLEC1Q9Y238 1755 aa23.14■■□□□ 1.3
CDIP1-212ENST00000588381 NPHP1O15259 732 aa23.14■■□□□ 1.29
CDIP1-212ENST00000588381 TMPOP42166 694 aaKnown RBP23.14■■□□□ 1.29
CDIP1-212ENST00000588381 ZC3H4Q9UPT8 1303 aaKnown RBP23.13■■□□□ 1.29
CDIP1-212ENST00000588381 TPTE2Q6XPS3 522 aa23.13■■□□□ 1.29
CDIP1-212ENST00000588381 RNF181Q9P0P0 153 aa23.13■■□□□ 1.29
CDIP1-212ENST00000588381 BCORQ6W2J9 1755 aa23.13■■□□□ 1.29
CDIP1-212ENST00000588381 KDM3BQ7LBC6 1761 aa23.13■■□□□ 1.29
CDIP1-212ENST00000588381 ERVV-1B6SEH8 477 aa23.12■■□□□ 1.29
CDIP1-212ENST00000588381 NBPF5PQ86XG9 351 aaPredicted RBP23.12■■□□□ 1.29
CDIP1-212ENST00000588381 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms