RNA–Protein interactions for RNA: ENST00000588316.1

GFAP-212, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 787 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-212ENST00000588316 DCTN1Q14203 1278 aa23.36■■□□□ 1.33
GFAP-212ENST00000588316 FMNL2Q96PY5 1086 aa23.36■■□□□ 1.33
GFAP-212ENST00000588316 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
GFAP-212ENST00000588316 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
GFAP-212ENST00000588316 DPEP1P16444 411 aa23.35■■□□□ 1.33
GFAP-212ENST00000588316 NARFQ9UHQ1 456 aa23.35■■□□□ 1.33
GFAP-212ENST00000588316 BCS1LQ9Y276 419 aa23.35■■□□□ 1.33
GFAP-212ENST00000588316 HEG1Q9ULI3 1381 aa23.35■■□□□ 1.33
GFAP-212ENST00000588316 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
GFAP-212ENST00000588316 TM4SF1P30408 202 aa23.34■■□□□ 1.33
GFAP-212ENST00000588316 DDR1Q08345 913 aa23.34■■□□□ 1.33
GFAP-212ENST00000588316 COL15A1P39059 1388 aa23.34■■□□□ 1.33
GFAP-212ENST00000588316 CEMIPQ8WUJ3 1361 aa23.34■■□□□ 1.33
GFAP-212ENST00000588316 UBR2Q8IWV8 1755 aa23.33■■□□□ 1.33
GFAP-212ENST00000588316 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
GFAP-212ENST00000588316 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
GFAP-212ENST00000588316 PXDNLA1KZ92 1463 aa23.31■■□□□ 1.32
GFAP-212ENST00000588316 A0A087WZG4 1122 aa23.31■■□□□ 1.32
GFAP-212ENST00000588316 C10orf71Q711Q0 1435 aa23.31■■□□□ 1.32
GFAP-212ENST00000588316 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
GFAP-212ENST00000588316 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
GFAP-212ENST00000588316 HTATSF1O43719 755 aaKnown RBP23.3■■□□□ 1.32
GFAP-212ENST00000588316 A1BGP04217 495 aa23.3■■□□□ 1.32
GFAP-212ENST00000588316 NFIXQ14938 502 aa23.3■■□□□ 1.32
GFAP-212ENST00000588316 BICDL1Q6ZP65 573 aa23.3■■□□□ 1.32
GFAP-212ENST00000588316 EIF5P55010 431 aaKnown RBP23.29■■□□□ 1.32
GFAP-212ENST00000588316 RALBP1Q15311 655 aa23.29■■□□□ 1.32
GFAP-212ENST00000588316 ARHGAP27Q6ZUM4 889 aa23.29■■□□□ 1.32
GFAP-212ENST00000588316 TBC1D2BQ9UPU7 963 aa23.29■■□□□ 1.32
GFAP-212ENST00000588316 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
GFAP-212ENST00000588316 BCL2L12Q9HB09 334 aa23.28■■□□□ 1.32
GFAP-212ENST00000588316 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
GFAP-212ENST00000588316 USP16Q9Y5T5 823 aa23.28■■□□□ 1.32
GFAP-212ENST00000588316 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
GFAP-212ENST00000588316 PIM2Q9P1W9 311 aa23.27■■□□□ 1.32
GFAP-212ENST00000588316 SERPINB2P05120 415 aa23.26■■□□□ 1.31
GFAP-212ENST00000588316 KCNA3P22001 575 aa23.26■■□□□ 1.31
GFAP-212ENST00000588316 CHRNA5P30532 468 aa23.26■■□□□ 1.31
GFAP-212ENST00000588316 ZNF526Q8TF50 670 aaPredicted RBP23.26■■□□□ 1.31
GFAP-212ENST00000588316 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
GFAP-212ENST00000588316 KIAA1551Q9HCM1 1747 aa23.25■■□□□ 1.31
GFAP-212ENST00000588316 PRAMEF22A3QJZ6 481 aa23.25■■□□□ 1.31
GFAP-212ENST00000588316 GIGYF1O75420 1035 aaPredicted RBP23.25■■□□□ 1.31
GFAP-212ENST00000588316 SNRPA1P09661 255 aaKnown RBP23.25■■□□□ 1.31
GFAP-212ENST00000588316 IL6STP40189 918 aaPredicted RBP23.25■■□□□ 1.31
GFAP-212ENST00000588316 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
GFAP-212ENST00000588316 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
GFAP-212ENST00000588316 NFE2L2Q16236 605 aa23.24■■□□□ 1.31
GFAP-212ENST00000588316 DALRD3Q5D0E6 543 aaKnown RBP23.23■■□□□ 1.31
GFAP-212ENST00000588316 ATP10DQ9P241 1426 aa23.23■■□□□ 1.31
GFAP-212ENST00000588316 C1QTNF8P60827 252 aa23.22■■□□□ 1.31
GFAP-212ENST00000588316 TBC1D9BQ66K14 1250 aa23.22■■□□□ 1.31
GFAP-212ENST00000588316 THUMPD2Q9BTF0 503 aaKnown RBP23.21■■□□□ 1.31
GFAP-212ENST00000588316 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
GFAP-212ENST00000588316 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
GFAP-212ENST00000588316 AFDNP55196 1824 aaKnown RBP23.2■■□□□ 1.3
GFAP-212ENST00000588316 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
GFAP-212ENST00000588316 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
GFAP-212ENST00000588316 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
GFAP-212ENST00000588316 NPHP1O15259 732 aa23.18■■□□□ 1.3
GFAP-212ENST00000588316 RIPK4P57078 832 aa23.17■■□□□ 1.3
GFAP-212ENST00000588316 C2CD5Q86YS7 1000 aa23.17■■□□□ 1.3
GFAP-212ENST00000588316 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
GFAP-212ENST00000588316 SETDB2Q96T68 719 aa23.17■■□□□ 1.3
GFAP-212ENST00000588316 H0YIN7 160 aa23.16■■□□□ 1.3
GFAP-212ENST00000588316 CAMTA2O94983 1202 aa23.16■■□□□ 1.3
GFAP-212ENST00000588316 BRCA1P38398 1863 aaKnown RBP23.15■■□□□ 1.3
GFAP-212ENST00000588316 NGEFQ8N5V2 710 aa23.15■■□□□ 1.3
GFAP-212ENST00000588316 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
GFAP-212ENST00000588316 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
GFAP-212ENST00000588316 NBPF26B4DH59 902 aa23.13■■□□□ 1.29
GFAP-212ENST00000588316 WDR43Q15061 677 aaKnown RBP eCLIP23.13■■□□□ 1.29
GFAP-212ENST00000588316 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
GFAP-212ENST00000588316 NBPF10Q6P3W6 841 aaKnown RBP23.13■■□□□ 1.29
GFAP-212ENST00000588316 NBPF15Q8N660 670 aa23.13■■□□□ 1.29
GFAP-212ENST00000588316 ADCY9O60503 1353 aa23.13■■□□□ 1.29
GFAP-212ENST00000588316 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
GFAP-212ENST00000588316 C9orf131Q5VYM1 1079 aa23.12■■□□□ 1.29
GFAP-212ENST00000588316 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
GFAP-212ENST00000588316 TTLL6Q8N841 843 aa23.12■■□□□ 1.29
GFAP-212ENST00000588316 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.29
GFAP-212ENST00000588316 NRXN2Q9P2S2 1712 aa23.12■■□□□ 1.29
GFAP-212ENST00000588316 CARMIL3Q8ND23 1372 aa23.12■■□□□ 1.29
GFAP-212ENST00000588316 ARFGEF1Q9Y6D6 1849 aa23.11■■□□□ 1.29
GFAP-212ENST00000588316 PDE6BP35913 854 aa23.11■■□□□ 1.29
GFAP-212ENST00000588316 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
GFAP-212ENST00000588316 RRP7AQ9Y3A4 280 aaKnown RBP23.11■■□□□ 1.29
GFAP-212ENST00000588316 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
GFAP-212ENST00000588316 CNBD1Q8NA66 436 aa23.1■■□□□ 1.29
GFAP-212ENST00000588316 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
GFAP-212ENST00000588316 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
GFAP-212ENST00000588316 SCN7AQ01118 1682 aa23.09■■□□□ 1.29
GFAP-212ENST00000588316 ST5P78524 1137 aa23.09■■□□□ 1.29
GFAP-212ENST00000588316 CLEC4GQ6UXB4 293 aa23.09■■□□□ 1.29
GFAP-212ENST00000588316 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
GFAP-212ENST00000588316 MYL6BP14649 208 aa23.08■■□□□ 1.29
GFAP-212ENST00000588316 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
GFAP-212ENST00000588316 RNF181Q9P0P0 153 aa23.08■■□□□ 1.29
GFAP-212ENST00000588316 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
GFAP-212ENST00000588316 LMOD3Q0VAK6 560 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms