RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 POLRMTO00411 1230 aaKnown RBP22.69■■□□□ 1.22
LINC01842-201ENST00000588275 C9orf131Q5VYM1 1079 aa22.68■■□□□ 1.22
LINC01842-201ENST00000588275 TTC5Q8N0Z6 440 aa22.67■■□□□ 1.22
LINC01842-201ENST00000588275 TM4SF1P30408 202 aa22.66■■□□□ 1.22
LINC01842-201ENST00000588275 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
LINC01842-201ENST00000588275 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
LINC01842-201ENST00000588275 UBR2Q8IWV8 1755 aa22.66■■□□□ 1.22
LINC01842-201ENST00000588275 CANXP27824 592 aaKnown RBP22.65■■□□□ 1.22
LINC01842-201ENST00000588275 NMRK2Q9NPI5 230 aa22.65■■□□□ 1.22
LINC01842-201ENST00000588275 NARFQ9UHQ1 456 aa22.65■■□□□ 1.22
LINC01842-201ENST00000588275 NFIXQ14938 502 aa22.64■■□□□ 1.21
LINC01842-201ENST00000588275 TEFQ10587 303 aa22.63■■□□□ 1.21
LINC01842-201ENST00000588275 VSIG10Q8N0Z9 540 aa22.63■■□□□ 1.21
LINC01842-201ENST00000588275 RNF181Q9P0P0 153 aa22.63■■□□□ 1.21
LINC01842-201ENST00000588275 GAS2L2Q8NHY3 880 aa22.62■■□□□ 1.21
LINC01842-201ENST00000588275 GNAT3A8MTJ3 354 aa22.61■■□□□ 1.21
LINC01842-201ENST00000588275 TOMM70O94826 608 aa22.61■■□□□ 1.21
LINC01842-201ENST00000588275 STARD3NLO95772 234 aa22.61■■□□□ 1.21
LINC01842-201ENST00000588275 BICDL1Q6ZP65 573 aa22.61■■□□□ 1.21
LINC01842-201ENST00000588275 ZNF330Q9Y3S2 320 aaPredicted RBP22.61■■□□□ 1.21
LINC01842-201ENST00000588275 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
LINC01842-201ENST00000588275 SERPINB2P05120 415 aa22.6■■□□□ 1.21
LINC01842-201ENST00000588275 BCL2L12Q9HB09 334 aa22.6■■□□□ 1.21
LINC01842-201ENST00000588275 C16orf71Q8IYS4 520 aaPredicted RBP22.59■■□□□ 1.21
LINC01842-201ENST00000588275 ZNF496Q96IT1 587 aaPredicted RBP22.59■■□□□ 1.21
LINC01842-201ENST00000588275 NRXN2Q9P2S2 1712 aa22.59■■□□□ 1.21
LINC01842-201ENST00000588275 IL17REQ8NFR9 667 aa22.58■■□□□ 1.21
LINC01842-201ENST00000588275 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.2
LINC01842-201ENST00000588275 RASSF7Q02833 373 aa22.57■■□□□ 1.2
LINC01842-201ENST00000588275 ZNF790Q6PG37 636 aa22.57■■□□□ 1.2
LINC01842-201ENST00000588275 HEG1Q9ULI3 1381 aa22.57■■□□□ 1.2
LINC01842-201ENST00000588275 SBF1O95248 1867 aa22.57■■□□□ 1.2
LINC01842-201ENST00000588275 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
LINC01842-201ENST00000588275 DLEC1Q9Y238 1755 aa22.56■■□□□ 1.2
LINC01842-201ENST00000588275 CARMIL3Q8ND23 1372 aa22.56■■□□□ 1.2
LINC01842-201ENST00000588275 A0A087WZG4 1122 aa22.56■■□□□ 1.2
LINC01842-201ENST00000588275 APLP1P51693 650 aa22.56■■□□□ 1.2
LINC01842-201ENST00000588275 CFAP53Q96M91 514 aa22.56■■□□□ 1.2
LINC01842-201ENST00000588275 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
LINC01842-201ENST00000588275 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
LINC01842-201ENST00000588275 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
LINC01842-201ENST00000588275 SCN7AQ01118 1682 aa22.55■■□□□ 1.2
LINC01842-201ENST00000588275 H0YIN7 160 aa22.53■■□□□ 1.2
LINC01842-201ENST00000588275 NPM2Q86SE8 214 aaKnown RBP22.53■■□□□ 1.2
LINC01842-201ENST00000588275 TTLL6Q8N841 843 aa22.53■■□□□ 1.2
LINC01842-201ENST00000588275 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
LINC01842-201ENST00000588275 TEX13AQ9BXU3 409 aaPredicted RBP22.53■■□□□ 1.2
LINC01842-201ENST00000588275 RRAGCQ9HB90 399 aa22.53■■□□□ 1.2
LINC01842-201ENST00000588275 TBC1D2BQ9UPU7 963 aa22.53■■□□□ 1.2
LINC01842-201ENST00000588275 TNRC6CQ9HCJ0 1690 aaKnown RBP22.52■■□□□ 1.2
LINC01842-201ENST00000588275 TBC1D9BQ66K14 1250 aa22.52■■□□□ 1.2
LINC01842-201ENST00000588275 RBM46Q8TBY0 533 aaKnown RBP22.52■■□□□ 1.2
LINC01842-201ENST00000588275 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
LINC01842-201ENST00000588275 BTBD11A6QL63 1104 aa22.51■■□□□ 1.19
LINC01842-201ENST00000588275 CCDC24Q8N4L8 307 aa22.51■■□□□ 1.19
LINC01842-201ENST00000588275 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
LINC01842-201ENST00000588275 NPHP1O15259 732 aa22.5■■□□□ 1.19
LINC01842-201ENST00000588275 KCNQ3O43525 872 aa22.5■■□□□ 1.19
LINC01842-201ENST00000588275 IFFO2Q5TF58 517 aa22.5■■□□□ 1.19
LINC01842-201ENST00000588275 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
LINC01842-201ENST00000588275 WDR90Q96KV7 1748 aa22.5■■□□□ 1.19
LINC01842-201ENST00000588275 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
LINC01842-201ENST00000588275 ANKRD31Q8N7Z5 1873 aa22.49■■□□□ 1.19
LINC01842-201ENST00000588275 A1BGP04217 495 aa22.49■■□□□ 1.19
LINC01842-201ENST00000588275 LMNB1P20700 586 aa22.49■■□□□ 1.19
LINC01842-201ENST00000588275 IL6STP40189 918 aaPredicted RBP22.49■■□□□ 1.19
LINC01842-201ENST00000588275 ZNF622Q969S3 477 aaKnown RBP eCLIP22.49■■□□□ 1.19
LINC01842-201ENST00000588275 TIAM2Q8IVF5 1701 aa22.48■■□□□ 1.19
LINC01842-201ENST00000588275 CCDC88AQ3V6T2 1871 aa22.48■■□□□ 1.19
LINC01842-201ENST00000588275 U2AF1L5P0DN76 240 aaPredicted RBP22.48■■□□□ 1.19
LINC01842-201ENST00000588275 U2AF1Q01081 240 aaKnown RBP eCLIP22.48■■□□□ 1.19
LINC01842-201ENST00000588275 ZNF219Q9P2Y4 722 aaPredicted RBP22.48■■□□□ 1.19
LINC01842-201ENST00000588275 RTF1Q92541 710 aaKnown RBP22.47■■□□□ 1.19
LINC01842-201ENST00000588275 COL11A2P13942 1736 aaPredicted RBP22.46■■□□□ 1.19
LINC01842-201ENST00000588275 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
LINC01842-201ENST00000588275 PRELPP51888 382 aa22.46■■□□□ 1.19
LINC01842-201ENST00000588275 HTRA3P83110 453 aa22.46■■□□□ 1.19
LINC01842-201ENST00000588275 PRR5LQ6MZQ0 368 aa22.46■■□□□ 1.19
LINC01842-201ENST00000588275 PPP2R1AP30153 589 aa22.45■■□□□ 1.18
LINC01842-201ENST00000588275 PDE6BP35913 854 aa22.45■■□□□ 1.18
LINC01842-201ENST00000588275 FSTL1Q12841 308 aa22.45■■□□□ 1.18
LINC01842-201ENST00000588275 MCM10Q7L590 875 aa22.45■■□□□ 1.18
LINC01842-201ENST00000588275 SETDB2Q96T68 719 aa22.45■■□□□ 1.18
LINC01842-201ENST00000588275 ZC3H4Q9UPT8 1303 aaKnown RBP22.45■■□□□ 1.18
LINC01842-201ENST00000588275 BCORQ6W2J9 1755 aa22.45■■□□□ 1.18
LINC01842-201ENST00000588275 NFKBIEO00221 500 aa22.44■■□□□ 1.18
LINC01842-201ENST00000588275 CAMTA2O94983 1202 aa22.44■■□□□ 1.18
LINC01842-201ENST00000588275 DZIP3Q86Y13 1208 aaKnown RBP22.44■■□□□ 1.18
LINC01842-201ENST00000588275 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
LINC01842-201ENST00000588275 BRIP1Q9BX63 1249 aa22.44■■□□□ 1.18
LINC01842-201ENST00000588275 CACNA1SQ13698 1873 aa22.43■■□□□ 1.18
LINC01842-201ENST00000588275 PRAMEF22A3QJZ6 481 aa22.43■■□□□ 1.18
LINC01842-201ENST00000588275 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
LINC01842-201ENST00000588275 C21orf2O43822 256 aa22.42■■□□□ 1.18
LINC01842-201ENST00000588275 ST5P78524 1137 aa22.42■■□□□ 1.18
LINC01842-201ENST00000588275 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
LINC01842-201ENST00000588275 DNAJC5GQ8N7S2 189 aa22.42■■□□□ 1.18
LINC01842-201ENST00000588275 PDZRN3Q9UPQ7 1066 aa22.42■■□□□ 1.18
LINC01842-201ENST00000588275 GLTPD2A6NH11 291 aa22.41■■□□□ 1.18
LINC01842-201ENST00000588275 SMC1BQ8NDV3 1235 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms