RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 RBM46Q8TBY0 533 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-208ENST00000588274 BCL2L12Q9HB09 334 aa18.88■□□□□ 0.61
CLPTM1-208ENST00000588274 COL15A1P39059 1388 aa18.88■□□□□ 0.61
CLPTM1-208ENST00000588274 PRELPP51888 382 aa18.87■□□□□ 0.61
CLPTM1-208ENST00000588274 DALRD3Q5D0E6 543 aaKnown RBP18.87■□□□□ 0.61
CLPTM1-208ENST00000588274 CARMIL3Q8ND23 1372 aa18.87■□□□□ 0.61
CLPTM1-208ENST00000588274 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
CLPTM1-208ENST00000588274 RNMTO43148 476 aaKnown RBP18.86■□□□□ 0.61
CLPTM1-208ENST00000588274 SLC39A6Q13433 755 aa18.86■□□□□ 0.61
CLPTM1-208ENST00000588274 ZBTB1Q9Y2K1 713 aa18.86■□□□□ 0.61
CLPTM1-208ENST00000588274 NFIXQ14938 502 aa18.85■□□□□ 0.61
CLPTM1-208ENST00000588274 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
CLPTM1-208ENST00000588274 TIAM2Q8IVF5 1701 aa18.85■□□□□ 0.61
CLPTM1-208ENST00000588274 KIF7Q2M1P5 1343 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 HTRA3P83110 453 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 NARFQ9UHQ1 456 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 ANKRD31Q8N7Z5 1873 aa18.84■□□□□ 0.61
CLPTM1-208ENST00000588274 COL11A2P13942 1736 aaPredicted RBP18.83■□□□□ 0.61
CLPTM1-208ENST00000588274 HMOX1P09601 288 aa18.83■□□□□ 0.6
CLPTM1-208ENST00000588274 RASSF7Q02833 373 aa18.83■□□□□ 0.6
CLPTM1-208ENST00000588274 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.6
CLPTM1-208ENST00000588274 PER1O15534 1290 aaPredicted RBP18.82■□□□□ 0.6
CLPTM1-208ENST00000588274 FSTL1Q12841 308 aa18.81■□□□□ 0.6
CLPTM1-208ENST00000588274 JMYQ8N9B5 988 aa18.81■□□□□ 0.6
CLPTM1-208ENST00000588274 ZC3H4Q9UPT8 1303 aaKnown RBP18.8■□□□□ 0.6
CLPTM1-208ENST00000588274 ZPR1O75312 459 aa18.8■□□□□ 0.6
CLPTM1-208ENST00000588274 VSIG10Q8N0Z9 540 aa18.8■□□□□ 0.6
CLPTM1-208ENST00000588274 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
CLPTM1-208ENST00000588274 NFKBIEO00221 500 aa18.78■□□□□ 0.6
CLPTM1-208ENST00000588274 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
CLPTM1-208ENST00000588274 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
CLPTM1-208ENST00000588274 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
CLPTM1-208ENST00000588274 SERPINB2P05120 415 aa18.77■□□□□ 0.6
CLPTM1-208ENST00000588274 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
CLPTM1-208ENST00000588274 ZNF496Q96IT1 587 aaPredicted RBP18.75■□□□□ 0.59
CLPTM1-208ENST00000588274 FER1L6Q2WGJ9 1857 aa18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 CEMIPQ8WUJ3 1361 aa18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 NPC1L1Q9UHC9 1359 aa18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 HEG1Q9ULI3 1381 aa18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 DIAPH1O60610 1272 aaKnown RBP18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 LMNB1P20700 586 aa18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
CLPTM1-208ENST00000588274 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
CLPTM1-208ENST00000588274 POTECB2RU33 542 aa18.73■□□□□ 0.59
CLPTM1-208ENST00000588274 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
CLPTM1-208ENST00000588274 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
CLPTM1-208ENST00000588274 TBC1D9BQ66K14 1250 aa18.72■□□□□ 0.59
CLPTM1-208ENST00000588274 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
CLPTM1-208ENST00000588274 TTLL6Q8N841 843 aa18.72■□□□□ 0.59
CLPTM1-208ENST00000588274 SMC1BQ8NDV3 1235 aa18.72■□□□□ 0.59
CLPTM1-208ENST00000588274 ARFGEF2Q9Y6D5 1785 aa18.72■□□□□ 0.59
CLPTM1-208ENST00000588274 DICER1Q9UPY3 1922 aaKnown RBP18.71■□□□□ 0.59
CLPTM1-208ENST00000588274 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
CLPTM1-208ENST00000588274 COL13A1Q5TAT6 717 aaPredicted RBP18.7■□□□□ 0.58
CLPTM1-208ENST00000588274 PRR5LQ6MZQ0 368 aa18.7■□□□□ 0.58
CLPTM1-208ENST00000588274 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
CLPTM1-208ENST00000588274 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
CLPTM1-208ENST00000588274 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 H0YIN7 160 aa18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 STARD3NLO95772 234 aa18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 VEGFAP15692 232 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 TTC5Q8N0Z6 440 aa18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
CLPTM1-208ENST00000588274 A0A087WZG4 1122 aa18.66■□□□□ 0.58
CLPTM1-208ENST00000588274 GNAT3A8MTJ3 354 aa18.66■□□□□ 0.58
CLPTM1-208ENST00000588274 KCNQ3O43525 872 aa18.66■□□□□ 0.58
CLPTM1-208ENST00000588274 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
CLPTM1-208ENST00000588274 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
CLPTM1-208ENST00000588274 LTBP3Q9NS15 1303 aa18.66■□□□□ 0.58
CLPTM1-208ENST00000588274 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
CLPTM1-208ENST00000588274 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
CLPTM1-208ENST00000588274 PHACTR3Q96KR7 559 aa18.65■□□□□ 0.58
CLPTM1-208ENST00000588274 CACNA1SQ13698 1873 aa18.65■□□□□ 0.58
CLPTM1-208ENST00000588274 A1BGP04217 495 aa18.64■□□□□ 0.57
CLPTM1-208ENST00000588274 C21orf2O43822 256 aa18.63■□□□□ 0.57
CLPTM1-208ENST00000588274 TEFQ10587 303 aa18.63■□□□□ 0.57
CLPTM1-208ENST00000588274 RSPH6AQ9H0K4 717 aa18.63■□□□□ 0.57
CLPTM1-208ENST00000588274 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
CLPTM1-208ENST00000588274 SRGNP10124 158 aa18.62■□□□□ 0.57
CLPTM1-208ENST00000588274 PDE6BP35913 854 aa18.62■□□□□ 0.57
CLPTM1-208ENST00000588274 FMNL2Q96PY5 1086 aa18.62■□□□□ 0.57
CLPTM1-208ENST00000588274 TEX13AQ9BXU3 409 aaPredicted RBP18.62■□□□□ 0.57
CLPTM1-208ENST00000588274 PDZRN3Q9UPQ7 1066 aa18.62■□□□□ 0.57
CLPTM1-208ENST00000588274 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
CLPTM1-208ENST00000588274 ZNF622Q969S3 477 aaKnown RBP eCLIP18.61■□□□□ 0.57
CLPTM1-208ENST00000588274 SNED1Q8TER0 1413 aa18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 POTEIP0CG38 1075 aa18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 CNBD1Q8NA66 436 aa18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 C7orf43Q8WVR3 580 aa18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
CLPTM1-208ENST00000588274 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms