RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
TMED1-203ENST00000588259 CANXP27824 592 aaKnown RBP22.73■■□□□ 1.23
TMED1-203ENST00000588259 PIM2Q9P1W9 311 aa22.73■■□□□ 1.23
TMED1-203ENST00000588259 POLRMTO00411 1230 aaKnown RBP22.72■■□□□ 1.23
TMED1-203ENST00000588259 STARD3NLO95772 234 aa22.71■■□□□ 1.23
TMED1-203ENST00000588259 CHRNA5P30532 468 aa22.71■■□□□ 1.23
TMED1-203ENST00000588259 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
TMED1-203ENST00000588259 VSIG10Q8N0Z9 540 aa22.71■■□□□ 1.23
TMED1-203ENST00000588259 ZNF330Q9Y3S2 320 aaPredicted RBP22.71■■□□□ 1.23
TMED1-203ENST00000588259 AFDNP55196 1824 aaKnown RBP22.71■■□□□ 1.23
TMED1-203ENST00000588259 PRKAR2BP31323 418 aa22.7■■□□□ 1.22
TMED1-203ENST00000588259 NARFQ9UHQ1 456 aa22.7■■□□□ 1.22
TMED1-203ENST00000588259 SIPA1L3O60292 1781 aaPredicted RBP22.7■■□□□ 1.22
TMED1-203ENST00000588259 KCNA3P22001 575 aa22.69■■□□□ 1.22
TMED1-203ENST00000588259 NFIXQ14938 502 aa22.69■■□□□ 1.22
TMED1-203ENST00000588259 IL17REQ8NFR9 667 aa22.69■■□□□ 1.22
TMED1-203ENST00000588259 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
TMED1-203ENST00000588259 TM4SF1P30408 202 aa22.68■■□□□ 1.22
TMED1-203ENST00000588259 ZNF496Q96IT1 587 aaPredicted RBP22.68■■□□□ 1.22
TMED1-203ENST00000588259 U2AF1L5P0DN76 240 aaPredicted RBP22.67■■□□□ 1.22
TMED1-203ENST00000588259 U2AF1Q01081 240 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMED1-203ENST00000588259 ZNF790Q6PG37 636 aa22.67■■□□□ 1.22
TMED1-203ENST00000588259 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
TMED1-203ENST00000588259 HEG1Q9ULI3 1381 aa22.66■■□□□ 1.22
TMED1-203ENST00000588259 PHACTR3Q96KR7 559 aa22.66■■□□□ 1.22
TMED1-203ENST00000588259 C9orf131Q5VYM1 1079 aa22.65■■□□□ 1.22
TMED1-203ENST00000588259 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
TMED1-203ENST00000588259 A0A087WZG4 1122 aa22.64■■□□□ 1.21
TMED1-203ENST00000588259 SERPINB2P05120 415 aa22.64■■□□□ 1.21
TMED1-203ENST00000588259 PPP2R1AP30153 589 aa22.64■■□□□ 1.21
TMED1-203ENST00000588259 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.21
TMED1-203ENST00000588259 FMNL2Q96PY5 1086 aa22.64■■□□□ 1.21
TMED1-203ENST00000588259 KIF3CO14782 793 aa22.63■■□□□ 1.21
TMED1-203ENST00000588259 TEX13AQ9BXU3 409 aaPredicted RBP22.63■■□□□ 1.21
TMED1-203ENST00000588259 BCL2L12Q9HB09 334 aa22.63■■□□□ 1.21
TMED1-203ENST00000588259 NRXN2Q9P2S2 1712 aa22.62■■□□□ 1.21
TMED1-203ENST00000588259 SCN7AQ01118 1682 aa22.62■■□□□ 1.21
TMED1-203ENST00000588259 BTBD11A6QL63 1104 aa22.62■■□□□ 1.21
TMED1-203ENST00000588259 HSPA6P17066 643 aa22.62■■□□□ 1.21
TMED1-203ENST00000588259 RTF1Q92541 710 aaKnown RBP22.62■■□□□ 1.21
TMED1-203ENST00000588259 RNF181Q9P0P0 153 aa22.62■■□□□ 1.21
TMED1-203ENST00000588259 CEP350Q5VT06 3117 aa22.62■■□□□ 1.21
TMED1-203ENST00000588259 EIF5P55010 431 aaKnown RBP22.61■■□□□ 1.21
TMED1-203ENST00000588259 CEMIPQ8WUJ3 1361 aa22.61■■□□□ 1.21
TMED1-203ENST00000588259 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
TMED1-203ENST00000588259 NMRK2Q9NPI5 230 aa22.6■■□□□ 1.21
TMED1-203ENST00000588259 TBC1D2BQ9UPU7 963 aa22.6■■□□□ 1.21
TMED1-203ENST00000588259 NPHP1O15259 732 aa22.59■■□□□ 1.21
TMED1-203ENST00000588259 KCNQ3O43525 872 aa22.59■■□□□ 1.21
TMED1-203ENST00000588259 C2CD5Q86YS7 1000 aa22.59■■□□□ 1.21
TMED1-203ENST00000588259 CARMIL3Q8ND23 1372 aa22.59■■□□□ 1.21
TMED1-203ENST00000588259 SBF1O95248 1867 aa22.58■■□□□ 1.21
TMED1-203ENST00000588259 A1BGP04217 495 aa22.58■■□□□ 1.21
TMED1-203ENST00000588259 TBC1D9BQ66K14 1250 aa22.58■■□□□ 1.21
TMED1-203ENST00000588259 MCM10Q7L590 875 aa22.58■■□□□ 1.21
TMED1-203ENST00000588259 H0YIN7 160 aa22.57■■□□□ 1.2
TMED1-203ENST00000588259 IL6STP40189 918 aaPredicted RBP22.57■■□□□ 1.2
TMED1-203ENST00000588259 RASSF7Q02833 373 aa22.56■■□□□ 1.2
TMED1-203ENST00000588259 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
TMED1-203ENST00000588259 TTLL6Q8N841 843 aa22.55■■□□□ 1.2
TMED1-203ENST00000588259 KDM2BQ8NHM5 1336 aa22.55■■□□□ 1.2
TMED1-203ENST00000588259 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
TMED1-203ENST00000588259 TOMM70O94826 608 aa22.54■■□□□ 1.2
TMED1-203ENST00000588259 NEFMP07197 916 aa22.54■■□□□ 1.2
TMED1-203ENST00000588259 PIP4K2AP48426 406 aaPredicted RBP22.54■■□□□ 1.2
TMED1-203ENST00000588259 DCTN1Q14203 1278 aa22.54■■□□□ 1.2
TMED1-203ENST00000588259 CCDC24Q8N4L8 307 aa22.54■■□□□ 1.2
TMED1-203ENST00000588259 BCORQ6W2J9 1755 aa22.53■■□□□ 1.2
TMED1-203ENST00000588259 DZIP3Q86Y13 1208 aaKnown RBP22.53■■□□□ 1.2
TMED1-203ENST00000588259 ZNF622Q969S3 477 aaKnown RBP eCLIP22.53■■□□□ 1.2
TMED1-203ENST00000588259 SETDB2Q96T68 719 aa22.52■■□□□ 1.2
TMED1-203ENST00000588259 CCDC88AQ3V6T2 1871 aa22.51■■□□□ 1.19
TMED1-203ENST00000588259 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
TMED1-203ENST00000588259 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
TMED1-203ENST00000588259 CAMTA2O94983 1202 aa22.51■■□□□ 1.19
TMED1-203ENST00000588259 CNBD1Q8NA66 436 aa22.51■■□□□ 1.19
TMED1-203ENST00000588259 USP16Q9Y5T5 823 aa22.51■■□□□ 1.19
TMED1-203ENST00000588259 TNRC6CQ9HCJ0 1690 aaKnown RBP22.51■■□□□ 1.19
TMED1-203ENST00000588259 CACNA1SQ13698 1873 aa22.5■■□□□ 1.19
TMED1-203ENST00000588259 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
TMED1-203ENST00000588259 PDE6BP35913 854 aa22.5■■□□□ 1.19
TMED1-203ENST00000588259 PRR5LQ6MZQ0 368 aa22.5■■□□□ 1.19
TMED1-203ENST00000588259 ZNF219Q9P2Y4 722 aaPredicted RBP22.5■■□□□ 1.19
TMED1-203ENST00000588259 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
TMED1-203ENST00000588259 TIAM2Q8IVF5 1701 aa22.49■■□□□ 1.19
TMED1-203ENST00000588259 LMNB1P20700 586 aa22.49■■□□□ 1.19
TMED1-203ENST00000588259 BRIP1Q9BX63 1249 aa22.49■■□□□ 1.19
TMED1-203ENST00000588259 APLP1P51693 650 aa22.48■■□□□ 1.19
TMED1-203ENST00000588259 ST5P78524 1137 aa22.48■■□□□ 1.19
TMED1-203ENST00000588259 HTATSF1O43719 755 aaKnown RBP22.47■■□□□ 1.19
TMED1-203ENST00000588259 RRAGCQ9HB90 399 aa22.47■■□□□ 1.19
TMED1-203ENST00000588259 ZNF652Q9Y2D9 606 aa22.47■■□□□ 1.19
TMED1-203ENST00000588259 RBM46Q8TBY0 533 aaKnown RBP22.46■■□□□ 1.19
TMED1-203ENST00000588259 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
TMED1-203ENST00000588259 PDZRN3Q9UPQ7 1066 aa22.46■■□□□ 1.19
TMED1-203ENST00000588259 TAF7Q15545 349 aaPredicted RBP22.45■■□□□ 1.18
TMED1-203ENST00000588259 NBPF5PQ86XG9 351 aaPredicted RBP22.45■■□□□ 1.18
TMED1-203ENST00000588259 ZC3H4Q9UPT8 1303 aaKnown RBP22.45■■□□□ 1.18
TMED1-203ENST00000588259 LAMB4A4D0S4 1761 aa22.45■■□□□ 1.18
TMED1-203ENST00000588259 C21orf2O43822 256 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms