RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 COL15A1P39059 1388 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 STARD3NLO95772 234 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
PKN1-211ENST00000588200 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 ZBTB1Q9Y2K1 713 aa17.92■□□□□ 0.46
PKN1-211ENST00000588200 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
PKN1-211ENST00000588200 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
PKN1-211ENST00000588200 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
PKN1-211ENST00000588200 TEFQ10587 303 aa17.91■□□□□ 0.46
PKN1-211ENST00000588200 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
PKN1-211ENST00000588200 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
PKN1-211ENST00000588200 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
PKN1-211ENST00000588200 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
PKN1-211ENST00000588200 FCHSD2O94868 740 aa17.89■□□□□ 0.45
PKN1-211ENST00000588200 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
PKN1-211ENST00000588200 ZNF496Q96IT1 587 aaPredicted RBP17.89■□□□□ 0.45
PKN1-211ENST00000588200 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
PKN1-211ENST00000588200 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
PKN1-211ENST00000588200 A0A087WZG4 1122 aa17.88■□□□□ 0.45
PKN1-211ENST00000588200 NFIXQ14938 502 aa17.88■□□□□ 0.45
PKN1-211ENST00000588200 DLEC1Q9Y238 1755 aa17.87■□□□□ 0.45
PKN1-211ENST00000588200 KIF3CO14782 793 aa17.87■□□□□ 0.45
PKN1-211ENST00000588200 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
PKN1-211ENST00000588200 PRKAR2BP31323 418 aa17.87■□□□□ 0.45
PKN1-211ENST00000588200 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
PKN1-211ENST00000588200 DALRD3Q5D0E6 543 aaKnown RBP17.87■□□□□ 0.45
PKN1-211ENST00000588200 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
PKN1-211ENST00000588200 ARHGAP27Q6ZUM4 889 aa17.86■□□□□ 0.45
PKN1-211ENST00000588200 SBF1O95248 1867 aa17.85■□□□□ 0.45
PKN1-211ENST00000588200 SERPINB2P05120 415 aa17.84■□□□□ 0.45
PKN1-211ENST00000588200 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
PKN1-211ENST00000588200 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
PKN1-211ENST00000588200 SCN7AQ01118 1682 aa17.83■□□□□ 0.45
PKN1-211ENST00000588200 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
PKN1-211ENST00000588200 ZC3H4Q9UPT8 1303 aaKnown RBP17.82■□□□□ 0.44
PKN1-211ENST00000588200 RGL2O15211 777 aa17.82■□□□□ 0.44
PKN1-211ENST00000588200 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
PKN1-211ENST00000588200 HSPA6P17066 643 aa17.82■□□□□ 0.44
PKN1-211ENST00000588200 CHRNA5P30532 468 aa17.82■□□□□ 0.44
PKN1-211ENST00000588200 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
PKN1-211ENST00000588200 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
PKN1-211ENST00000588200 TOMM70O94826 608 aa17.8■□□□□ 0.44
PKN1-211ENST00000588200 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
PKN1-211ENST00000588200 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
PKN1-211ENST00000588200 RTF1Q92541 710 aaKnown RBP17.8■□□□□ 0.44
PKN1-211ENST00000588200 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
PKN1-211ENST00000588200 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
PKN1-211ENST00000588200 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
PKN1-211ENST00000588200 BCORQ6W2J9 1755 aa17.79■□□□□ 0.44
PKN1-211ENST00000588200 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
PKN1-211ENST00000588200 ANKRD31Q8N7Z5 1873 aa17.78■□□□□ 0.44
PKN1-211ENST00000588200 KCNQ3O43525 872 aa17.78■□□□□ 0.44
PKN1-211ENST00000588200 A1BGP04217 495 aa17.78■□□□□ 0.44
PKN1-211ENST00000588200 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
PKN1-211ENST00000588200 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
PKN1-211ENST00000588200 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
PKN1-211ENST00000588200 USP16Q9Y5T5 823 aa17.78■□□□□ 0.44
PKN1-211ENST00000588200 H0YIN7 160 aa17.77■□□□□ 0.44
PKN1-211ENST00000588200 PDE6BP35913 854 aa17.76■□□□□ 0.43
PKN1-211ENST00000588200 TAF7Q15545 349 aaPredicted RBP17.76■□□□□ 0.43
PKN1-211ENST00000588200 MCM10Q7L590 875 aa17.76■□□□□ 0.43
PKN1-211ENST00000588200 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
PKN1-211ENST00000588200 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
PKN1-211ENST00000588200 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
PKN1-211ENST00000588200 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
PKN1-211ENST00000588200 PRR5LQ6MZQ0 368 aa17.75■□□□□ 0.43
PKN1-211ENST00000588200 C2CD5Q86YS7 1000 aa17.75■□□□□ 0.43
PKN1-211ENST00000588200 KDM2BQ8NHM5 1336 aa17.74■□□□□ 0.43
PKN1-211ENST00000588200 LMNB1P20700 586 aa17.74■□□□□ 0.43
PKN1-211ENST00000588200 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
PKN1-211ENST00000588200 RBM46Q8TBY0 533 aaKnown RBP17.74■□□□□ 0.43
PKN1-211ENST00000588200 SETDB2Q96T68 719 aa17.74■□□□□ 0.43
PKN1-211ENST00000588200 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
PKN1-211ENST00000588200 RNF181Q9P0P0 153 aa17.74■□□□□ 0.43
PKN1-211ENST00000588200 TNRC6CQ9HCJ0 1690 aaKnown RBP17.74■□□□□ 0.43
PKN1-211ENST00000588200 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
PKN1-211ENST00000588200 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
PKN1-211ENST00000588200 KDM3BQ7LBC6 1761 aa17.72■□□□□ 0.43
PKN1-211ENST00000588200 NEFMP07197 916 aa17.72■□□□□ 0.43
PKN1-211ENST00000588200 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
PKN1-211ENST00000588200 FER1L6Q2WGJ9 1857 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 DICER1Q9UPY3 1922 aaKnown RBP17.71■□□□□ 0.43
PKN1-211ENST00000588200 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.43
PKN1-211ENST00000588200 APLP1P51693 650 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 FSTL1Q12841 308 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 DCTN1Q14203 1278 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 COL11A2P13942 1736 aaPredicted RBP17.71■□□□□ 0.43
PKN1-211ENST00000588200 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.43
PKN1-211ENST00000588200 LTBP3Q9NS15 1303 aa17.71■□□□□ 0.42
PKN1-211ENST00000588200 PRAMEF22A3QJZ6 481 aa17.7■□□□□ 0.42
PKN1-211ENST00000588200 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
PKN1-211ENST00000588200 NFKBIEO00221 500 aa17.7■□□□□ 0.42
PKN1-211ENST00000588200 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
PKN1-211ENST00000588200 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms