RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 CHPF2Q9P2E5 772 aa20.65■□□□□ 0.9
NLE1-204ENST00000588019 STARD3NLO95772 234 aa20.64■□□□□ 0.89
NLE1-204ENST00000588019 ERICH6BQ5W0A0 696 aa20.64■□□□□ 0.89
NLE1-204ENST00000588019 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
NLE1-204ENST00000588019 TRIM27P14373 513 aa20.63■□□□□ 0.89
NLE1-204ENST00000588019 IRX6P78412 446 aaPredicted RBP20.63■□□□□ 0.89
NLE1-204ENST00000588019 DZIP1LQ8IYY4 767 aaKnown RBP20.63■□□□□ 0.89
NLE1-204ENST00000588019 GTF3C3Q9Y5Q9 886 aa20.63■□□□□ 0.89
NLE1-204ENST00000588019 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
NLE1-204ENST00000588019 C5P01031 1676 aa20.62■□□□□ 0.89
NLE1-204ENST00000588019 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
NLE1-204ENST00000588019 SIK1P57059 783 aa20.62■□□□□ 0.89
NLE1-204ENST00000588019 FLIIQ13045 1269 aa20.62■□□□□ 0.89
NLE1-204ENST00000588019 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
NLE1-204ENST00000588019 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
NLE1-204ENST00000588019 SLC4A9Q96Q91 983 aa20.61■□□□□ 0.89
NLE1-204ENST00000588019 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
NLE1-204ENST00000588019 ATP6V1AP38606 617 aa20.6■□□□□ 0.89
NLE1-204ENST00000588019 PDIA6Q15084 440 aa20.6■□□□□ 0.89
NLE1-204ENST00000588019 C20orf194Q5TEA3 1177 aa20.6■□□□□ 0.89
NLE1-204ENST00000588019 G2E3Q7L622 706 aa20.6■□□□□ 0.89
NLE1-204ENST00000588019 PTF1AQ7RTS3 328 aa20.6■□□□□ 0.89
NLE1-204ENST00000588019 SBF2Q86WG5 1849 aa20.6■□□□□ 0.89
NLE1-204ENST00000588019 CLUAP1Q96AJ1 413 aa20.59■□□□□ 0.89
NLE1-204ENST00000588019 TRIM37O94972 964 aa20.58■□□□□ 0.89
NLE1-204ENST00000588019 CYP19A1P11511 503 aaPredicted RBP20.58■□□□□ 0.89
NLE1-204ENST00000588019 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.89
NLE1-204ENST00000588019 PANK1Q8TE04 598 aa20.58■□□□□ 0.89
NLE1-204ENST00000588019 PHAXQ9H814 394 aaKnown RBP20.58■□□□□ 0.89
NLE1-204ENST00000588019 BTAF1O14981 1849 aa20.57■□□□□ 0.88
NLE1-204ENST00000588019 CACNA1FO60840 1977 aa20.57■□□□□ 0.88
NLE1-204ENST00000588019 ANXA1P04083 346 aa20.57■□□□□ 0.88
NLE1-204ENST00000588019 PROSER3Q2NL68 480 aa20.57■□□□□ 0.88
NLE1-204ENST00000588019 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
NLE1-204ENST00000588019 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
NLE1-204ENST00000588019 ABCC4O15439 1325 aa20.56■□□□□ 0.88
NLE1-204ENST00000588019 DDX58O95786 925 aaKnown RBP20.56■□□□□ 0.88
NLE1-204ENST00000588019 A1BGP04217 495 aa20.56■□□□□ 0.88
NLE1-204ENST00000588019 RLBP1P12271 317 aa20.56■□□□□ 0.88
NLE1-204ENST00000588019 MYL6BP14649 208 aa20.56■□□□□ 0.88
NLE1-204ENST00000588019 ZNF831Q5JPB2 1677 aa20.56■□□□□ 0.88
NLE1-204ENST00000588019 CICQ96RK0 1608 aaPredicted RBP20.56■□□□□ 0.88
NLE1-204ENST00000588019 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
NLE1-204ENST00000588019 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
NLE1-204ENST00000588019 ITPK1Q13572 414 aa20.54■□□□□ 0.88
NLE1-204ENST00000588019 MVPQ14764 893 aaKnown RBP20.54■□□□□ 0.88
NLE1-204ENST00000588019 NBPF14Q5TI25 921 aa20.54■□□□□ 0.88
NLE1-204ENST00000588019 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
NLE1-204ENST00000588019 LRP10Q7Z4F1 713 aa20.54■□□□□ 0.88
NLE1-204ENST00000588019 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
NLE1-204ENST00000588019 COG6Q9Y2V7 657 aa20.54■□□□□ 0.88
NLE1-204ENST00000588019 TJP1Q07157 1748 aa20.53■□□□□ 0.88
NLE1-204ENST00000588019 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
NLE1-204ENST00000588019 TMEM57Q8N5G2 664 aa20.53■□□□□ 0.88
NLE1-204ENST00000588019 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
NLE1-204ENST00000588019 XAGE3Q8WTP9 111 aa20.53■□□□□ 0.88
NLE1-204ENST00000588019 CHMP4BQ9H444 224 aaKnown RBP20.53■□□□□ 0.88
NLE1-204ENST00000588019 CCNL1Q9UK58 526 aaPredicted RBP20.53■□□□□ 0.88
NLE1-204ENST00000588019 AIMP1Q12904 312 aaKnown RBP20.52■□□□□ 0.88
NLE1-204ENST00000588019 AAMPQ13685 434 aa20.52■□□□□ 0.88
NLE1-204ENST00000588019 INTS3Q68E01 1043 aaKnown RBP20.52■□□□□ 0.88
NLE1-204ENST00000588019 KSR2Q6VAB6 950 aa20.52■□□□□ 0.88
NLE1-204ENST00000588019 ITPRIPQ8IWB1 547 aa20.52■□□□□ 0.88
NLE1-204ENST00000588019 CCDC87Q9NVE4 849 aa20.52■□□□□ 0.88
NLE1-204ENST00000588019 DDX19BQ9UMR2 479 aa20.52■□□□□ 0.88
NLE1-204ENST00000588019 CRKLP46109 303 aaKnown RBP20.51■□□□□ 0.87
NLE1-204ENST00000588019 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
NLE1-204ENST00000588019 CCT4P50991 539 aaKnown RBP20.51■□□□□ 0.87
NLE1-204ENST00000588019 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
NLE1-204ENST00000588019 PI4KAP2A4QPH2 592 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 F6X3S4 739 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 PLSCR1O15162 318 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 IL6STP40189 918 aaPredicted RBP20.5■□□□□ 0.87
NLE1-204ENST00000588019 SLC27A3Q5K4L6 730 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 SLC4A10Q6U841 1118 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 PI4KAP1Q8N8J0 262 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 DNAAF4Q8WXU2 420 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 PXDNLA1KZ92 1463 aa20.5■□□□□ 0.87
NLE1-204ENST00000588019 APBA3O96018 575 aa20.49■□□□□ 0.87
NLE1-204ENST00000588019 RC3H1Q5TC82 1133 aaKnown RBP20.49■□□□□ 0.87
NLE1-204ENST00000588019 INTS5Q6P9B9 1019 aaKnown RBP20.49■□□□□ 0.87
NLE1-204ENST00000588019 ANKRD13DQ6ZTN6 518 aa20.49■□□□□ 0.87
NLE1-204ENST00000588019 RIC3Q7Z5B4 369 aa20.49■□□□□ 0.87
NLE1-204ENST00000588019 ZBTB1Q9Y2K1 713 aa20.49■□□□□ 0.87
NLE1-204ENST00000588019 LY75O60449 1722 aa20.49■□□□□ 0.87
NLE1-204ENST00000588019 CNTNAP4Q9C0A0 1308 aa20.49■□□□□ 0.87
NLE1-204ENST00000588019 ADCY9O60503 1353 aa20.48■□□□□ 0.87
NLE1-204ENST00000588019 LINC00116Q8NCU8 138 aa20.48■□□□□ 0.87
NLE1-204ENST00000588019 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
NLE1-204ENST00000588019 MAP3K2Q9Y2U5 619 aa20.48■□□□□ 0.87
NLE1-204ENST00000588019 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
NLE1-204ENST00000588019 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
NLE1-204ENST00000588019 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
NLE1-204ENST00000588019 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
NLE1-204ENST00000588019 KCNQ4P56696 695 aa20.45■□□□□ 0.86
NLE1-204ENST00000588019 NEXNQ0ZGT2 675 aa20.45■□□□□ 0.86
NLE1-204ENST00000588019 SRCIN1Q9C0H9 1055 aa20.45■□□□□ 0.86
NLE1-204ENST00000588019 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
NLE1-204ENST00000588019 COL5A3P25940 1745 aaPredicted RBP20.44■□□□□ 0.86
NLE1-204ENST00000588019 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms