RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
LINC01539-201ENST00000587904 AHDC1Q5TGY3 1603 aaPredicted RBP11.9□□□□□ -0.5
LINC01539-201ENST00000587904 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.5
LINC01539-201ENST00000587904 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.5
LINC01539-201ENST00000587904 TAF3Q5VWG9 929 aa11.9□□□□□ -0.5
LINC01539-201ENST00000587904 CHRNA2Q15822 529 aa11.9□□□□□ -0.51
LINC01539-201ENST00000587904 G2E3Q7L622 706 aa11.9□□□□□ -0.51
LINC01539-201ENST00000587904 IFNL2Q8IZJ0 200 aa11.9□□□□□ -0.51
LINC01539-201ENST00000587904 KDM6AO15550 1401 aaPredicted RBP11.89□□□□□ -0.51
LINC01539-201ENST00000587904 PHKG2P15735 406 aa11.89□□□□□ -0.51
LINC01539-201ENST00000587904 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
LINC01539-201ENST00000587904 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
LINC01539-201ENST00000587904 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
LINC01539-201ENST00000587904 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
LINC01539-201ENST00000587904 MRE11P49959 708 aa11.88□□□□□ -0.51
LINC01539-201ENST00000587904 C1orf115Q9H7X2 142 aa11.88□□□□□ -0.51
LINC01539-201ENST00000587904 COL22A1Q8NFW1 1626 aaPredicted RBP11.88□□□□□ -0.51
LINC01539-201ENST00000587904 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
LINC01539-201ENST00000587904 SIRT2Q8IXJ6 389 aa11.88□□□□□ -0.51
LINC01539-201ENST00000587904 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
LINC01539-201ENST00000587904 GTPBP4Q9BZE4 634 aaKnown RBP11.88□□□□□ -0.51
LINC01539-201ENST00000587904 ZHX1Q9UKY1 873 aaPredicted RBP11.88□□□□□ -0.51
LINC01539-201ENST00000587904 HMMRO75330 724 aa11.87□□□□□ -0.51
LINC01539-201ENST00000587904 GNAI3P08754 354 aa11.87□□□□□ -0.51
LINC01539-201ENST00000587904 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
LINC01539-201ENST00000587904 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
LINC01539-201ENST00000587904 ROBO1Q9Y6N7 1651 aa11.87□□□□□ -0.51
LINC01539-201ENST00000587904 SLC4A10Q6U841 1118 aa11.87□□□□□ -0.51
LINC01539-201ENST00000587904 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
LINC01539-201ENST00000587904 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
LINC01539-201ENST00000587904 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
LINC01539-201ENST00000587904 MEIS3Q99687 375 aa11.86□□□□□ -0.51
LINC01539-201ENST00000587904 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
LINC01539-201ENST00000587904 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
LINC01539-201ENST00000587904 COL14A1Q05707 1796 aaKnown RBP11.86□□□□□ -0.51
LINC01539-201ENST00000587904 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
LINC01539-201ENST00000587904 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
LINC01539-201ENST00000587904 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
LINC01539-201ENST00000587904 F6X3S4 739 aa11.85□□□□□ -0.51
LINC01539-201ENST00000587904 OFD1O75665 1012 aa11.85□□□□□ -0.51
LINC01539-201ENST00000587904 LETM1O95202 739 aaPredicted RBP11.85□□□□□ -0.51
LINC01539-201ENST00000587904 GNAI2P04899 355 aa11.85□□□□□ -0.51
LINC01539-201ENST00000587904 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
LINC01539-201ENST00000587904 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
LINC01539-201ENST00000587904 ZNF830Q96NB3 372 aaPredicted RBP11.85□□□□□ -0.51
LINC01539-201ENST00000587904 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
LINC01539-201ENST00000587904 KCNQ3O43525 872 aa11.84□□□□□ -0.51
LINC01539-201ENST00000587904 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
LINC01539-201ENST00000587904 ZNF790Q6PG37 636 aa11.84□□□□□ -0.51
LINC01539-201ENST00000587904 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
LINC01539-201ENST00000587904 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
LINC01539-201ENST00000587904 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
LINC01539-201ENST00000587904 CYP27B1O15528 508 aa11.83□□□□□ -0.51
LINC01539-201ENST00000587904 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.51
LINC01539-201ENST00000587904 HYPKQ9NX55 129 aa11.83□□□□□ -0.51
LINC01539-201ENST00000587904 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.51
LINC01539-201ENST00000587904 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
LINC01539-201ENST00000587904 C5P01031 1676 aa11.83□□□□□ -0.52
LINC01539-201ENST00000587904 BMP2KLQ5H9B9 411 aa11.83□□□□□ -0.52
LINC01539-201ENST00000587904 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01539-201ENST00000587904 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 IL2RBP14784 551 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
LINC01539-201ENST00000587904 SRCIN1Q9C0H9 1055 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 PHAXQ9H814 394 aaKnown RBP11.82□□□□□ -0.52
LINC01539-201ENST00000587904 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 PLCH1Q4KWH8 1693 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
LINC01539-201ENST00000587904 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
LINC01539-201ENST00000587904 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
LINC01539-201ENST00000587904 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
LINC01539-201ENST00000587904 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
LINC01539-201ENST00000587904 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC01539-201ENST00000587904 ADCY9O60503 1353 aa11.81□□□□□ -0.52
LINC01539-201ENST00000587904 ERVV-2B6SEH9 535 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 DDX58O95786 925 aaKnown RBP11.8□□□□□ -0.52
LINC01539-201ENST00000587904 UBTFL1P0CB47 393 aaPredicted RBP11.8□□□□□ -0.52
LINC01539-201ENST00000587904 GLI3P10071 1580 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
LINC01539-201ENST00000587904 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 UBR2Q8IWV8 1755 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 CABP4P57796 275 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 EVA1CP58658 441 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 PANK2Q9BZ23 570 aa11.8□□□□□ -0.52
LINC01539-201ENST00000587904 COL16A1Q07092 1604 aaPredicted RBP11.79□□□□□ -0.52
LINC01539-201ENST00000587904 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
LINC01539-201ENST00000587904 BEND3Q5T5X7 828 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 HOMEZQ8IX15 550 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
LINC01539-201ENST00000587904 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 DYNC1I1O14576 645 aa11.79□□□□□ -0.52
LINC01539-201ENST00000587904 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms