RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
SDF2-206ENST00000587788 KIAA0232Q92628 1395 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 THSD7AQ9UPZ6 1657 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 PPP1R3GB7ZBB8 358 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 SOCS7O14512 581 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 FYB1O15117 783 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 OATP04181 439 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 COL9A1P20849 921 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 B4GALNT3Q6L9W6 998 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.49□□□□□ -1.21
SDF2-206ENST00000587788 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 QTRT2Q9H974 415 aaKnown RBP7.49□□□□□ -1.21
SDF2-206ENST00000587788 GOPCQ9HD26 462 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 GPCPD1Q9NPB8 672 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 FAM198AQ9UFP1 575 aa7.49□□□□□ -1.21
SDF2-206ENST00000587788 ZC3H6P61129 1189 aaKnown RBP7.48□□□□□ -1.21
SDF2-206ENST00000587788 CHRNA2Q15822 529 aa7.48□□□□□ -1.21
SDF2-206ENST00000587788 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
SDF2-206ENST00000587788 EDC4Q6P2E9 1401 aaKnown RBP7.48□□□□□ -1.21
SDF2-206ENST00000587788 MAP2P11137 1827 aaKnown RBP7.48□□□□□ -1.21
SDF2-206ENST00000587788 OVOS2A0A0J9YW53 1432 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 OVOS2Q6IE36 1432 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 RXRBP28702 533 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 MDM2Q00987 491 aaPredicted RBP7.47□□□□□ -1.21
SDF2-206ENST00000587788 NME9Q86XW9 330 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.47□□□□□ -1.21
SDF2-206ENST00000587788 CFAP53Q96M91 514 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 TRPC5Q9UL62 973 aaPredicted RBP7.47□□□□□ -1.21
SDF2-206ENST00000587788 TTC21AQ8NDW8 1320 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 ZNF521Q96K83 1311 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 PEAK1Q9H792 1746 aa7.47□□□□□ -1.21
SDF2-206ENST00000587788 CPDO75976 1380 aa7.46□□□□□ -1.21
SDF2-206ENST00000587788 E9PSI1 815 aa7.46□□□□□ -1.22
SDF2-206ENST00000587788 GCP02774 474 aa7.46□□□□□ -1.22
SDF2-206ENST00000587788 RBM6P78332 1123 aaKnown RBP7.46□□□□□ -1.22
SDF2-206ENST00000587788 UNC5CLQ8IV45 518 aa7.46□□□□□ -1.22
SDF2-206ENST00000587788 PNNQ9H307 717 aaKnown RBP7.46□□□□□ -1.22
SDF2-206ENST00000587788 PRDM11Q9NQV5 511 aa7.46□□□□□ -1.22
SDF2-206ENST00000587788 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
SDF2-206ENST00000587788 BTG4Q9NY30 223 aa7.46□□□□□ -1.22
SDF2-206ENST00000587788 COL5A2P05997 1499 aaPredicted RBP7.46□□□□□ -1.22
SDF2-206ENST00000587788 PARP4Q9UKK3 1724 aaKnown RBP7.46□□□□□ -1.22
SDF2-206ENST00000587788 USP31Q70CQ4 1352 aa7.46□□□□□ -1.22
SDF2-206ENST00000587788 LRRC37A3O60309 1634 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 NSD3Q9BZ95 1437 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 FAM208AQ9UK61 1670 aaKnown RBP7.45□□□□□ -1.22
SDF2-206ENST00000587788 PTPREP23469 700 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 SLFN5Q08AF3 891 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 VPS72Q15906 364 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 TRMT2AQ8IZ69 625 aaKnown RBP7.45□□□□□ -1.22
SDF2-206ENST00000587788 COG3Q96JB2 828 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 GJD4Q96KN9 370 aaPredicted RBP7.45□□□□□ -1.22
SDF2-206ENST00000587788 TSKSQ9UJT2 592 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 SALL2Q9Y467 1007 aaPredicted RBP7.45□□□□□ -1.22
SDF2-206ENST00000587788 SBF2Q86WG5 1849 aa7.45□□□□□ -1.22
SDF2-206ENST00000587788 TNS1Q9HBL0 1735 aaKnown RBP7.44□□□□□ -1.22
SDF2-206ENST00000587788 ABCC6O95255 1503 aa7.44□□□□□ -1.22
SDF2-206ENST00000587788 ZBTB7CA1YPR0 619 aa7.44□□□□□ -1.22
SDF2-206ENST00000587788 TCERG1O14776 1098 aaKnown RBP7.44□□□□□ -1.22
SDF2-206ENST00000587788 DUSP27Q5VZP5 1158 aa7.44□□□□□ -1.22
SDF2-206ENST00000587788 EYA1Q99502 592 aa7.44□□□□□ -1.22
SDF2-206ENST00000587788 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
SDF2-206ENST00000587788 EP400Q96L91 3159 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.43□□□□□ -1.22
SDF2-206ENST00000587788 C3orf80F5H4A9 247 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 MTHFSP49914 203 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 AAMPQ13685 434 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
SDF2-206ENST00000587788 NLRP7Q8WX94 980 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 RUNDC1Q96C34 613 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 ANP32EQ9BTT0 268 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 STRN4Q9NRL3 753 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
SDF2-206ENST00000587788 AATKQ6ZMQ8 1374 aa7.43□□□□□ -1.22
SDF2-206ENST00000587788 RGPD1P0DJD0 1748 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 APAF1O14727 1248 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 ONECUT3O60422 494 aaPredicted RBP7.42□□□□□ -1.22
SDF2-206ENST00000587788 FBLN1P23142 703 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 SSTR3P32745 418 aaPredicted RBP7.42□□□□□ -1.22
SDF2-206ENST00000587788 SH3D19Q5HYK7 790 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 LHX8Q68G74 356 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 LARP1Q6PKG0 1096 aaKnown RBP7.42□□□□□ -1.22
SDF2-206ENST00000587788 ARHGEF25Q86VW2 580 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 EXOC6Q8TAG9 804 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 SPATA31A5Q5VU36 1347 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 SPATA31A7Q8IWB4 1347 aa7.42□□□□□ -1.22
SDF2-206ENST00000587788 FAM98CQ17RN3 349 aaKnown RBP7.41□□□□□ -1.22
SDF2-206ENST00000587788 SPATA31A1Q5TZJ5 1347 aa7.41□□□□□ -1.22
SDF2-206ENST00000587788 CRB1P82279 1406 aa7.41□□□□□ -1.22
SDF2-206ENST00000587788 RCCD1A6NED2 376 aa7.4□□□□□ -1.22
SDF2-206ENST00000587788 NBPF26B4DH59 902 aa7.4□□□□□ -1.22
SDF2-206ENST00000587788 DIAPH1O60610 1272 aaKnown RBP7.4□□□□□ -1.22
SDF2-206ENST00000587788 CT47B1P0C2W7 299 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms