RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 DDR1Q08345 913 aa25.22■■□□□ 1.63
TRIM47-205ENST00000587774 RSPH6AQ9H0K4 717 aa25.22■■□□□ 1.63
TRIM47-205ENST00000587774 ZBTB1Q9Y2K1 713 aa25.22■■□□□ 1.63
TRIM47-205ENST00000587774 A0A0G2JLW4 131 aa25.21■■□□□ 1.63
TRIM47-205ENST00000587774 PPP2R1AP30153 589 aa25.21■■□□□ 1.63
TRIM47-205ENST00000587774 PRKAR2BP31323 418 aa25.21■■□□□ 1.63
TRIM47-205ENST00000587774 VSIG10Q8N0Z9 540 aa25.21■■□□□ 1.63
TRIM47-205ENST00000587774 IL17REQ8NFR9 667 aa25.21■■□□□ 1.63
TRIM47-205ENST00000587774 CEMIPQ8WUJ3 1361 aa25.2■■□□□ 1.63
TRIM47-205ENST00000587774 TTC5Q8N0Z6 440 aa25.2■■□□□ 1.62
TRIM47-205ENST00000587774 DPEP1P16444 411 aa25.19■■□□□ 1.62
TRIM47-205ENST00000587774 TEFQ10587 303 aa25.19■■□□□ 1.62
TRIM47-205ENST00000587774 USPL1Q5W0Q7 1092 aa25.19■■□□□ 1.62
TRIM47-205ENST00000587774 PHACTR3Q96KR7 559 aa25.19■■□□□ 1.62
TRIM47-205ENST00000587774 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
TRIM47-205ENST00000587774 COL11A2P13942 1736 aaPredicted RBP25.18■■□□□ 1.62
TRIM47-205ENST00000587774 ZPR1O75312 459 aa25.18■■□□□ 1.62
TRIM47-205ENST00000587774 BCS1LQ9Y276 419 aa25.18■■□□□ 1.62
TRIM47-205ENST00000587774 HEG1Q9ULI3 1381 aa25.17■■□□□ 1.62
TRIM47-205ENST00000587774 POLRMTO00411 1230 aaKnown RBP25.16■■□□□ 1.62
TRIM47-205ENST00000587774 ZNF790Q6PG37 636 aa25.16■■□□□ 1.62
TRIM47-205ENST00000587774 ZNF496Q96IT1 587 aaPredicted RBP25.16■■□□□ 1.62
TRIM47-205ENST00000587774 NARFQ9UHQ1 456 aa25.15■■□□□ 1.62
TRIM47-205ENST00000587774 NUDCQ9Y266 331 aa25.15■■□□□ 1.62
TRIM47-205ENST00000587774 U2AF1L5P0DN76 240 aaPredicted RBP25.14■■□□□ 1.62
TRIM47-205ENST00000587774 KCNA3P22001 575 aa25.14■■□□□ 1.62
TRIM47-205ENST00000587774 TM4SF1P30408 202 aa25.14■■□□□ 1.62
TRIM47-205ENST00000587774 U2AF1Q01081 240 aaKnown RBP eCLIP25.14■■□□□ 1.62
TRIM47-205ENST00000587774 SENP3-EIF4A1A0A087X0R7 540 aa25.13■■□□□ 1.61
TRIM47-205ENST00000587774 CANXP27824 592 aaKnown RBP25.13■■□□□ 1.61
TRIM47-205ENST00000587774 ZNF526Q8TF50 670 aaPredicted RBP25.13■■□□□ 1.61
TRIM47-205ENST00000587774 GPBP1L1Q9HC44 474 aaPredicted RBP25.13■■□□□ 1.61
TRIM47-205ENST00000587774 ARFGEF2Q9Y6D5 1785 aa25.13■■□□□ 1.61
TRIM47-205ENST00000587774 TIAM2Q8IVF5 1701 aa25.12■■□□□ 1.61
TRIM47-205ENST00000587774 FCHSD2O94868 740 aa25.12■■□□□ 1.61
TRIM47-205ENST00000587774 STARD3NLO95772 234 aa25.12■■□□□ 1.61
TRIM47-205ENST00000587774 BCL2L12Q9HB09 334 aa25.12■■□□□ 1.61
TRIM47-205ENST00000587774 NFIXQ14938 502 aa25.11■■□□□ 1.61
TRIM47-205ENST00000587774 EIF5P55010 431 aaKnown RBP25.09■■□□□ 1.61
TRIM47-205ENST00000587774 FMNL2Q96PY5 1086 aa25.09■■□□□ 1.61
TRIM47-205ENST00000587774 DICER1Q9UPY3 1922 aaKnown RBP25.09■■□□□ 1.61
TRIM47-205ENST00000587774 TNRC6CQ9HCJ0 1690 aaKnown RBP25.08■■□□□ 1.61
TRIM47-205ENST00000587774 BTBD11A6QL63 1104 aa25.08■■□□□ 1.61
TRIM47-205ENST00000587774 CHRNA5P30532 468 aa25.08■■□□□ 1.61
TRIM47-205ENST00000587774 PIM2Q9P1W9 311 aa25.08■■□□□ 1.61
TRIM47-205ENST00000587774 CARMIL3Q8ND23 1372 aa25.07■■□□□ 1.6
TRIM47-205ENST00000587774 KCNQ3O43525 872 aa25.07■■□□□ 1.6
TRIM47-205ENST00000587774 ARHGAP27Q6ZUM4 889 aa25.07■■□□□ 1.6
TRIM47-205ENST00000587774 NUP98P52948 1817 aa25.07■■□□□ 1.6
TRIM47-205ENST00000587774 FER1L6Q2WGJ9 1857 aa25.06■■□□□ 1.6
TRIM47-205ENST00000587774 MCM10Q7L590 875 aa25.06■■□□□ 1.6
TRIM47-205ENST00000587774 TEX13AQ9BXU3 409 aaPredicted RBP25.06■■□□□ 1.6
TRIM47-205ENST00000587774 DALRD3Q5D0E6 543 aaKnown RBP25.05■■□□□ 1.6
TRIM47-205ENST00000587774 RTF1Q92541 710 aaKnown RBP25.04■■□□□ 1.6
TRIM47-205ENST00000587774 ZNF330Q9Y3S2 320 aaPredicted RBP25.04■■□□□ 1.6
TRIM47-205ENST00000587774 A0A087WZG4 1122 aa25.03■■□□□ 1.6
TRIM47-205ENST00000587774 SERPINB2P05120 415 aa25.03■■□□□ 1.6
TRIM47-205ENST00000587774 IL6STP40189 918 aaPredicted RBP25.03■■□□□ 1.6
TRIM47-205ENST00000587774 A1BGP04217 495 aa25.02■■□□□ 1.6
TRIM47-205ENST00000587774 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
TRIM47-205ENST00000587774 BICDL1Q6ZP65 573 aa25.01■■□□□ 1.59
TRIM47-205ENST00000587774 SLX4Q8IY92 1834 aa25■■□□□ 1.59
TRIM47-205ENST00000587774 TBC1D9BQ66K14 1250 aa25■■□□□ 1.59
TRIM47-205ENST00000587774 TBC1D2BQ9UPU7 963 aa25■■□□□ 1.59
TRIM47-205ENST00000587774 PRAMEF22A3QJZ6 481 aa24.99■■□□□ 1.59
TRIM47-205ENST00000587774 HTATSF1O43719 755 aaKnown RBP24.98■■□□□ 1.59
TRIM47-205ENST00000587774 USP16Q9Y5T5 823 aa24.98■■□□□ 1.59
TRIM47-205ENST00000587774 KIF3CO14782 793 aa24.97■■□□□ 1.59
TRIM47-205ENST00000587774 PIP4K2AP48426 406 aaPredicted RBP24.97■■□□□ 1.59
TRIM47-205ENST00000587774 C9orf131Q5VYM1 1079 aa24.96■■□□□ 1.59
TRIM47-205ENST00000587774 CAMTA2O94983 1202 aa24.95■■□□□ 1.58
TRIM47-205ENST00000587774 SNRPA1P09661 255 aaKnown RBP24.94■■□□□ 1.58
TRIM47-205ENST00000587774 NPM2Q86SE8 214 aaKnown RBP24.94■■□□□ 1.58
TRIM47-205ENST00000587774 C2CD5Q86YS7 1000 aa24.94■■□□□ 1.58
TRIM47-205ENST00000587774 PLEKHF1Q96S99 279 aa24.94■■□□□ 1.58
TRIM47-205ENST00000587774 WDR90Q96KV7 1748 aa24.93■■□□□ 1.58
TRIM47-205ENST00000587774 NEFMP07197 916 aa24.93■■□□□ 1.58
TRIM47-205ENST00000587774 DZIP3Q86Y13 1208 aaKnown RBP24.93■■□□□ 1.58
TRIM47-205ENST00000587774 PRR5LQ6MZQ0 368 aa24.92■■□□□ 1.58
TRIM47-205ENST00000587774 RNF181Q9P0P0 153 aa24.92■■□□□ 1.58
TRIM47-205ENST00000587774 ANKRD36CQ5JPF3 1778 aa24.92■■□□□ 1.58
TRIM47-205ENST00000587774 H0YIN7 160 aa24.91■■□□□ 1.58
TRIM47-205ENST00000587774 RASSF7Q02833 373 aa24.91■■□□□ 1.58
TRIM47-205ENST00000587774 TAF7Q15545 349 aaPredicted RBP24.91■■□□□ 1.58
TRIM47-205ENST00000587774 CCDC24Q8N4L8 307 aa24.91■■□□□ 1.58
TRIM47-205ENST00000587774 TTLL6Q8N841 843 aa24.9■■□□□ 1.58
TRIM47-205ENST00000587774 NMRK2Q9NPI5 230 aa24.9■■□□□ 1.58
TRIM47-205ENST00000587774 MIS18AQ9NYP9 233 aa24.9■■□□□ 1.58
TRIM47-205ENST00000587774 SETDB2Q96T68 719 aa24.89■■□□□ 1.58
TRIM47-205ENST00000587774 NBPF26B4DH59 902 aa24.88■■□□□ 1.57
TRIM47-205ENST00000587774 NFE2L2Q16236 605 aa24.88■■□□□ 1.57
TRIM47-205ENST00000587774 NBPF10Q6P3W6 841 aaKnown RBP24.88■■□□□ 1.57
TRIM47-205ENST00000587774 NBPF15Q8N660 670 aa24.88■■□□□ 1.57
TRIM47-205ENST00000587774 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
TRIM47-205ENST00000587774 BRIP1Q9BX63 1249 aa24.88■■□□□ 1.57
TRIM47-205ENST00000587774 MAPK8IP3Q9UPT6 1336 aa24.87■■□□□ 1.57
TRIM47-205ENST00000587774 HSPA6P17066 643 aa24.87■■□□□ 1.57
TRIM47-205ENST00000587774 THUMPD2Q9BTF0 503 aaKnown RBP24.87■■□□□ 1.57
TRIM47-205ENST00000587774 PDE6BP35913 854 aa24.86■■□□□ 1.57
TRIM47-205ENST00000587774 NPHP1O15259 732 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms