RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 A0A087WZG4 1122 aa18.48■□□□□ 0.55
RDH13-209ENST00000587721 GNAT3A8MTJ3 354 aa18.48■□□□□ 0.55
RDH13-209ENST00000587721 TOMM70O94826 608 aa18.48■□□□□ 0.55
RDH13-209ENST00000587721 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
RDH13-209ENST00000587721 C9orf131Q5VYM1 1079 aa18.48■□□□□ 0.55
RDH13-209ENST00000587721 TEX13AQ9BXU3 409 aaPredicted RBP18.48■□□□□ 0.55
RDH13-209ENST00000587721 ZBTB1Q9Y2K1 713 aa18.48■□□□□ 0.55
RDH13-209ENST00000587721 NPM2Q86SE8 214 aaKnown RBP18.47■□□□□ 0.55
RDH13-209ENST00000587721 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
RDH13-209ENST00000587721 CANXP27824 592 aaKnown RBP18.46■□□□□ 0.55
RDH13-209ENST00000587721 CHRNA5P30532 468 aa18.46■□□□□ 0.55
RDH13-209ENST00000587721 NFIXQ14938 502 aa18.46■□□□□ 0.55
RDH13-209ENST00000587721 C16orf71Q8IYS4 520 aaPredicted RBP18.46■□□□□ 0.55
RDH13-209ENST00000587721 KDM2BQ8NHM5 1336 aa18.46■□□□□ 0.55
RDH13-209ENST00000587721 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
RDH13-209ENST00000587721 SERPINB2P05120 415 aa18.44■□□□□ 0.54
RDH13-209ENST00000587721 APLP1P51693 650 aa18.44■□□□□ 0.54
RDH13-209ENST00000587721 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
RDH13-209ENST00000587721 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
RDH13-209ENST00000587721 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
RDH13-209ENST00000587721 ADAMTS7Q9UKP4 1686 aa18.42■□□□□ 0.54
RDH13-209ENST00000587721 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
RDH13-209ENST00000587721 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
RDH13-209ENST00000587721 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
RDH13-209ENST00000587721 NMRK2Q9NPI5 230 aa18.42■□□□□ 0.54
RDH13-209ENST00000587721 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
RDH13-209ENST00000587721 H0YIN7 160 aa18.41■□□□□ 0.54
RDH13-209ENST00000587721 EIF5P55010 431 aaKnown RBP18.41■□□□□ 0.54
RDH13-209ENST00000587721 TTLL6Q8N841 843 aa18.41■□□□□ 0.54
RDH13-209ENST00000587721 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
RDH13-209ENST00000587721 ARFGEF1Q9Y6D6 1849 aa18.41■□□□□ 0.54
RDH13-209ENST00000587721 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
RDH13-209ENST00000587721 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
RDH13-209ENST00000587721 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
RDH13-209ENST00000587721 RBM46Q8TBY0 533 aaKnown RBP18.4■□□□□ 0.54
RDH13-209ENST00000587721 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
RDH13-209ENST00000587721 ZNF330Q9Y3S2 320 aaPredicted RBP18.4■□□□□ 0.54
RDH13-209ENST00000587721 PRKAR2BP31323 418 aa18.39■□□□□ 0.53
RDH13-209ENST00000587721 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
RDH13-209ENST00000587721 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.53
RDH13-209ENST00000587721 ZC3H4Q9UPT8 1303 aaKnown RBP18.39■□□□□ 0.53
RDH13-209ENST00000587721 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
RDH13-209ENST00000587721 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
RDH13-209ENST00000587721 NPHP1O15259 732 aa18.37■□□□□ 0.53
RDH13-209ENST00000587721 LMNB1P20700 586 aa18.37■□□□□ 0.53
RDH13-209ENST00000587721 PDE6BP35913 854 aa18.37■□□□□ 0.53
RDH13-209ENST00000587721 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
RDH13-209ENST00000587721 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
RDH13-209ENST00000587721 FSTL1Q12841 308 aa18.36■□□□□ 0.53
RDH13-209ENST00000587721 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
RDH13-209ENST00000587721 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
RDH13-209ENST00000587721 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
RDH13-209ENST00000587721 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
RDH13-209ENST00000587721 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
RDH13-209ENST00000587721 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
RDH13-209ENST00000587721 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
RDH13-209ENST00000587721 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
RDH13-209ENST00000587721 TBC1D9BQ66K14 1250 aa18.35■□□□□ 0.53
RDH13-209ENST00000587721 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
RDH13-209ENST00000587721 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
RDH13-209ENST00000587721 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
RDH13-209ENST00000587721 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■□□□□ 11.2
RDH13-209ENST00000587721 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.52
RDH13-209ENST00000587721 A1BGP04217 495 aa18.33■□□□□ 0.52
RDH13-209ENST00000587721 NEFMP07197 916 aa18.33■□□□□ 0.52
RDH13-209ENST00000587721 PPP2R1AP30153 589 aa18.32■□□□□ 0.52
RDH13-209ENST00000587721 ST5P78524 1137 aa18.32■□□□□ 0.52
RDH13-209ENST00000587721 RASSF7Q02833 373 aa18.32■□□□□ 0.52
RDH13-209ENST00000587721 CNBD1Q8NA66 436 aa18.32■□□□□ 0.52
RDH13-209ENST00000587721 AFDNP55196 1824 aaKnown RBP18.31■□□□□ 0.52
RDH13-209ENST00000587721 GLTPD2A6NH11 291 aa18.31■□□□□ 0.52
RDH13-209ENST00000587721 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
RDH13-209ENST00000587721 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
RDH13-209ENST00000587721 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
RDH13-209ENST00000587721 DPY19L2Q6NUT2 758 aa18.31■□□□□ 0.52
RDH13-209ENST00000587721 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
RDH13-209ENST00000587721 SMC1BQ8NDV3 1235 aa18.31■□□□□ 0.52
RDH13-209ENST00000587721 ZNF652Q9Y2D9 606 aa18.31■□□□□ 0.52
RDH13-209ENST00000587721 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
RDH13-209ENST00000587721 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
RDH13-209ENST00000587721 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
RDH13-209ENST00000587721 KCNQ3O43525 872 aa18.29■□□□□ 0.52
RDH13-209ENST00000587721 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
RDH13-209ENST00000587721 MCM10Q7L590 875 aa18.29■□□□□ 0.52
RDH13-209ENST00000587721 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
RDH13-209ENST00000587721 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
RDH13-209ENST00000587721 DNAJC5GQ8N7S2 189 aa18.28■□□□□ 0.52
RDH13-209ENST00000587721 NFKBIEO00221 500 aa18.27■□□□□ 0.52
RDH13-209ENST00000587721 C21orf2O43822 256 aa18.27■□□□□ 0.52
RDH13-209ENST00000587721 STYK1Q6J9G0 422 aa18.27■□□□□ 0.52
RDH13-209ENST00000587721 TNRC6CQ9HCJ0 1690 aaKnown RBP18.27■□□□□ 0.52
RDH13-209ENST00000587721 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.51
RDH13-209ENST00000587721 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
RDH13-209ENST00000587721 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
RDH13-209ENST00000587721 ERFEQ4G0M1 354 aa18.26■□□□□ 0.51
RDH13-209ENST00000587721 NBPF5PQ86XG9 351 aaPredicted RBP18.26■□□□□ 0.51
RDH13-209ENST00000587721 CCDC24Q8N4L8 307 aa18.26■□□□□ 0.51
RDH13-209ENST00000587721 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
RDH13-209ENST00000587721 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
RDH13-209ENST00000587721 SBF1O95248 1867 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms