RNA–Protein interactions for RNA: ENST00000587579.1

SNRPD2-205, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 5

Gene SNRPD2, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-205ENST00000587579 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
SNRPD2-205ENST00000587579 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
SNRPD2-205ENST00000587579 COL15A1P39059 1388 aa17.19■□□□□ 0.34
SNRPD2-205ENST00000587579 ZPR1O75312 459 aa17.19■□□□□ 0.34
SNRPD2-205ENST00000587579 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
SNRPD2-205ENST00000587579 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
SNRPD2-205ENST00000587579 NFIXQ14938 502 aa17.18■□□□□ 0.34
SNRPD2-205ENST00000587579 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
SNRPD2-205ENST00000587579 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
SNRPD2-205ENST00000587579 SBF1O95248 1867 aa17.18■□□□□ 0.34
SNRPD2-205ENST00000587579 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
SNRPD2-205ENST00000587579 C9orf131Q5VYM1 1079 aa17.17■□□□□ 0.34
SNRPD2-205ENST00000587579 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
SNRPD2-205ENST00000587579 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
SNRPD2-205ENST00000587579 HSPA6P17066 643 aa17.16■□□□□ 0.34
SNRPD2-205ENST00000587579 DALRD3Q5D0E6 543 aaKnown RBP17.16■□□□□ 0.34
SNRPD2-205ENST00000587579 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
SNRPD2-205ENST00000587579 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
SNRPD2-205ENST00000587579 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
SNRPD2-205ENST00000587579 KCNQ3O43525 872 aa17.15■□□□□ 0.34
SNRPD2-205ENST00000587579 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
SNRPD2-205ENST00000587579 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
SNRPD2-205ENST00000587579 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
SNRPD2-205ENST00000587579 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
SNRPD2-205ENST00000587579 EIF5P55010 431 aaKnown RBP17.13■□□□□ 0.33
SNRPD2-205ENST00000587579 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
SNRPD2-205ENST00000587579 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
SNRPD2-205ENST00000587579 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
SNRPD2-205ENST00000587579 SERPINB2P05120 415 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 RASSF7Q02833 373 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 TEFQ10587 303 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 RNF181Q9P0P0 153 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 SCN7AQ01118 1682 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
SNRPD2-205ENST00000587579 A1BGP04217 495 aa17.11■□□□□ 0.33
SNRPD2-205ENST00000587579 PRELPP51888 382 aa17.11■□□□□ 0.33
SNRPD2-205ENST00000587579 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
SNRPD2-205ENST00000587579 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
SNRPD2-205ENST00000587579 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
SNRPD2-205ENST00000587579 TBC1D2BQ9UPU7 963 aa17.1■□□□□ 0.33
SNRPD2-205ENST00000587579 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
SNRPD2-205ENST00000587579 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
SNRPD2-205ENST00000587579 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
SNRPD2-205ENST00000587579 STARD3NLO95772 234 aa17.09■□□□□ 0.33
SNRPD2-205ENST00000587579 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
SNRPD2-205ENST00000587579 C2CD5Q86YS7 1000 aa17.09■□□□□ 0.33
SNRPD2-205ENST00000587579 TOMM70O94826 608 aa17.07■□□□□ 0.32
SNRPD2-205ENST00000587579 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
SNRPD2-205ENST00000587579 MCM10Q7L590 875 aa17.07■□□□□ 0.32
SNRPD2-205ENST00000587579 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
SNRPD2-205ENST00000587579 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 HTRA3P83110 453 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 USP16Q9Y5T5 823 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 BCORQ6W2J9 1755 aa17.06■□□□□ 0.32
SNRPD2-205ENST00000587579 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
SNRPD2-205ENST00000587579 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
SNRPD2-205ENST00000587579 A0A087WZG4 1122 aa17.04■□□□□ 0.32
SNRPD2-205ENST00000587579 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
SNRPD2-205ENST00000587579 PRR5LQ6MZQ0 368 aa17.04■□□□□ 0.32
SNRPD2-205ENST00000587579 TTLL6Q8N841 843 aa17.04■□□□□ 0.32
SNRPD2-205ENST00000587579 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
SNRPD2-205ENST00000587579 H0YIN7 160 aa17.03■□□□□ 0.32
SNRPD2-205ENST00000587579 NFKBIEO00221 500 aa17.03■□□□□ 0.32
SNRPD2-205ENST00000587579 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
SNRPD2-205ENST00000587579 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
SNRPD2-205ENST00000587579 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
SNRPD2-205ENST00000587579 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
SNRPD2-205ENST00000587579 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
SNRPD2-205ENST00000587579 ZNF622Q969S3 477 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNRPD2-205ENST00000587579 SLX4Q8IY92 1834 aa17.01■□□□□ 0.31
SNRPD2-205ENST00000587579 PCNTO95613 3336 aa17.01■□□□□ 0.31
SNRPD2-205ENST00000587579 APLP1P51693 650 aa17.01■□□□□ 0.31
SNRPD2-205ENST00000587579 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
SNRPD2-205ENST00000587579 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
SNRPD2-205ENST00000587579 FER1L6Q2WGJ9 1857 aa17.01■□□□□ 0.31
SNRPD2-205ENST00000587579 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
SNRPD2-205ENST00000587579 LMNB1P20700 586 aa17■□□□□ 0.31
SNRPD2-205ENST00000587579 DZIP3Q86Y13 1208 aaKnown RBP17■□□□□ 0.31
SNRPD2-205ENST00000587579 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
SNRPD2-205ENST00000587579 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
SNRPD2-205ENST00000587579 NBPF26B4DH59 902 aa16.99■□□□□ 0.31
SNRPD2-205ENST00000587579 C21orf2O43822 256 aa16.99■□□□□ 0.31
SNRPD2-205ENST00000587579 NBPF10Q6P3W6 841 aaKnown RBP16.99■□□□□ 0.31
SNRPD2-205ENST00000587579 NBPF15Q8N660 670 aa16.99■□□□□ 0.31
SNRPD2-205ENST00000587579 SETDB2Q96T68 719 aa16.99■□□□□ 0.31
SNRPD2-205ENST00000587579 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
SNRPD2-205ENST00000587579 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
SNRPD2-205ENST00000587579 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
SNRPD2-205ENST00000587579 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
SNRPD2-205ENST00000587579 PDE6BP35913 854 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms