RNA–Protein interactions for RNA: ENST00000587564.2

SPRED3-205, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 1 (best)

Gene SPRED3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-205ENST00000587564 TM4SF1P30408 202 aa28.74■■■□□ 2.19
SPRED3-205ENST00000587564 MTHFSDQ2M296 383 aaKnown RBP28.74■■■□□ 2.19
SPRED3-205ENST00000587564 COL15A1P39059 1388 aa28.74■■■□□ 2.19
SPRED3-205ENST00000587564 VIRMAQ69YN4 1812 aaKnown RBP28.73■■■□□ 2.19
SPRED3-205ENST00000587564 APLP1P51693 650 aa28.72■■■□□ 2.19
SPRED3-205ENST00000587564 ZBTB1Q9Y2K1 713 aa28.72■■■□□ 2.19
SPRED3-205ENST00000587564 NPC1L1Q9UHC9 1359 aa28.72■■■□□ 2.19
SPRED3-205ENST00000587564 RNF181Q9P0P0 153 aa28.71■■■□□ 2.19
SPRED3-205ENST00000587564 NARFQ9UHQ1 456 aa28.71■■■□□ 2.19
SPRED3-205ENST00000587564 NFIXQ14938 502 aa28.68■■■□□ 2.18
SPRED3-205ENST00000587564 C16orf71Q8IYS4 520 aaPredicted RBP28.68■■■□□ 2.18
SPRED3-205ENST00000587564 VSIG10Q8N0Z9 540 aa28.68■■■□□ 2.18
SPRED3-205ENST00000587564 KDM2BQ8NHM5 1336 aa28.68■■■□□ 2.18
SPRED3-205ENST00000587564 TTC5Q8N0Z6 440 aa28.67■■■□□ 2.18
SPRED3-205ENST00000587564 UBR2Q8IWV8 1755 aa28.66■■■□□ 2.18
SPRED3-205ENST00000587564 CANXP27824 592 aaKnown RBP28.65■■■□□ 2.18
SPRED3-205ENST00000587564 AFDNP55196 1824 aaKnown RBP28.64■■■□□ 2.18
SPRED3-205ENST00000587564 NRXN2Q9P2S2 1712 aa28.64■■■□□ 2.18
SPRED3-205ENST00000587564 RBM46Q8TBY0 533 aaKnown RBP28.64■■■□□ 2.18
SPRED3-205ENST00000587564 COL3A1P02461 1466 aaPredicted RBP28.64■■■□□ 2.17
SPRED3-205ENST00000587564 U2SURPO15042 1029 aaKnown RBP28.63■■■□□ 2.17
SPRED3-205ENST00000587564 SERPINB2P05120 415 aa28.63■■■□□ 2.17
SPRED3-205ENST00000587564 BCL2L12Q9HB09 334 aa28.63■■■□□ 2.17
SPRED3-205ENST00000587564 STARD3NLO95772 234 aa28.62■■■□□ 2.17
SPRED3-205ENST00000587564 TEFQ10587 303 aa28.61■■■□□ 2.17
SPRED3-205ENST00000587564 RASSF7Q02833 373 aa28.6■■■□□ 2.17
SPRED3-205ENST00000587564 GAS2L2Q8NHY3 880 aa28.6■■■□□ 2.17
SPRED3-205ENST00000587564 DLEC1Q9Y238 1755 aa28.6■■■□□ 2.17
SPRED3-205ENST00000587564 TNRC6CQ9HCJ0 1690 aaKnown RBP28.59■■■□□ 2.17
SPRED3-205ENST00000587564 WDR90Q96KV7 1748 aa28.58■■■□□ 2.17
SPRED3-205ENST00000587564 A0A087WZG4 1122 aa28.58■■■□□ 2.17
SPRED3-205ENST00000587564 GNAT3A8MTJ3 354 aa28.58■■■□□ 2.17
SPRED3-205ENST00000587564 BICDL1Q6ZP65 573 aa28.58■■■□□ 2.17
SPRED3-205ENST00000587564 C2CD5Q86YS7 1000 aa28.58■■■□□ 2.17
SPRED3-205ENST00000587564 CARMIL3Q8ND23 1372 aa28.58■■■□□ 2.17
SPRED3-205ENST00000587564 EIF5P55010 431 aaKnown RBP28.57■■■□□ 2.16
SPRED3-205ENST00000587564 TTLL6Q8N841 843 aa28.57■■■□□ 2.16
SPRED3-205ENST00000587564 ZNF496Q96IT1 587 aaPredicted RBP28.57■■■□□ 2.16
SPRED3-205ENST00000587564 RRAGCQ9HB90 399 aa28.57■■■□□ 2.16
SPRED3-205ENST00000587564 HEG1Q9ULI3 1381 aa28.57■■■□□ 2.16
SPRED3-205ENST00000587564 SBF1O95248 1867 aa28.57■■■□□ 2.16
SPRED3-205ENST00000587564 FSTL1Q12841 308 aa28.56■■■□□ 2.16
SPRED3-205ENST00000587564 ZNF790Q6PG37 636 aa28.56■■■□□ 2.16
SPRED3-205ENST00000587564 ZC3H4Q9UPT8 1303 aaKnown RBP28.56■■■□□ 2.16
SPRED3-205ENST00000587564 ZNF330Q9Y3S2 320 aaPredicted RBP28.56■■■□□ 2.16
SPRED3-205ENST00000587564 H0YIN7 160 aa28.55■■■□□ 2.16
SPRED3-205ENST00000587564 DNAJC5GQ8N7S2 189 aa28.55■■■□□ 2.16
SPRED3-205ENST00000587564 IL17REQ8NFR9 667 aa28.55■■■□□ 2.16
SPRED3-205ENST00000587564 SCN7AQ01118 1682 aa28.54■■■□□ 2.16
SPRED3-205ENST00000587564 LMNB1P20700 586 aa28.54■■■□□ 2.16
SPRED3-205ENST00000587564 TEX13AQ9BXU3 409 aaPredicted RBP28.54■■■□□ 2.16
SPRED3-205ENST00000587564 SIPA1L3O60292 1781 aaPredicted RBP28.52■■■□□ 2.16
SPRED3-205ENST00000587564 TBC1D9BQ66K14 1250 aa28.51■■■□□ 2.15
SPRED3-205ENST00000587564 FMNL2Q96PY5 1086 aa28.51■■■□□ 2.15
SPRED3-205ENST00000587564 PPP2R1AP30153 589 aa28.5■■■□□ 2.15
SPRED3-205ENST00000587564 NPM2Q86SE8 214 aaKnown RBP28.5■■■□□ 2.15
SPRED3-205ENST00000587564 TBC1D2BQ9UPU7 963 aa28.5■■■□□ 2.15
SPRED3-205ENST00000587564 TIAM2Q8IVF5 1701 aa28.49■■■□□ 2.15
SPRED3-205ENST00000587564 IL6STP40189 918 aaPredicted RBP28.49■■■□□ 2.15
SPRED3-205ENST00000587564 HTRA3P83110 453 aa28.49■■■□□ 2.15
SPRED3-205ENST00000587564 PRELPP51888 382 aa28.48■■■□□ 2.15
SPRED3-205ENST00000587564 SMC1BQ8NDV3 1235 aa28.48■■■□□ 2.15
SPRED3-205ENST00000587564 CFAP53Q96M91 514 aa28.48■■■□□ 2.15
SPRED3-205ENST00000587564 CEMIPQ8WUJ3 1361 aa28.48■■■□□ 2.15
SPRED3-205ENST00000587564 PRKAR2BP31323 418 aa28.47■■■□□ 2.15
SPRED3-205ENST00000587564 ZNF622Q969S3 477 aaKnown RBP eCLIP28.47■■■□□ 2.15
SPRED3-205ENST00000587564 PDZRN3Q9UPQ7 1066 aa28.47■■■□□ 2.15
SPRED3-205ENST00000587564 NFKBIEO00221 500 aa28.46■■■□□ 2.15
SPRED3-205ENST00000587564 PDE6BP35913 854 aa28.46■■■□□ 2.15
SPRED3-205ENST00000587564 PRR5LQ6MZQ0 368 aa28.46■■■□□ 2.15
SPRED3-205ENST00000587564 KLRG1Q96E93 195 aa28.46■■■□□ 2.15
SPRED3-205ENST00000587564 ANKRD31Q8N7Z5 1873 aa28.46■■■□□ 2.15
SPRED3-205ENST00000587564 GLTPD2A6NH11 291 aa28.45■■■□□ 2.14
SPRED3-205ENST00000587564 BTBD11A6QL63 1104 aa28.45■■■□□ 2.14
SPRED3-205ENST00000587564 NPHP1O15259 732 aa28.45■■■□□ 2.14
SPRED3-205ENST00000587564 A1BGP04217 495 aa28.45■■■□□ 2.14
SPRED3-205ENST00000587564 CCDC24Q8N4L8 307 aa28.45■■■□□ 2.14
SPRED3-205ENST00000587564 BRIP1Q9BX63 1249 aa28.45■■■□□ 2.14
SPRED3-205ENST00000587564 COL11A2P13942 1736 aaPredicted RBP28.44■■■□□ 2.14
SPRED3-205ENST00000587564 PHACTR3Q96KR7 559 aa28.44■■■□□ 2.14
SPRED3-205ENST00000587564 RSPH6AQ9H0K4 717 aa28.44■■■□□ 2.14
SPRED3-205ENST00000587564 VEGFAP15692 232 aaPredicted RBP28.43■■■□□ 2.14
SPRED3-205ENST00000587564 ZNF219Q9P2Y4 722 aaPredicted RBP28.43■■■□□ 2.14
SPRED3-205ENST00000587564 KCNQ3O43525 872 aa28.42■■■□□ 2.14
SPRED3-205ENST00000587564 CNBD1Q8NA66 436 aa28.42■■■□□ 2.14
SPRED3-205ENST00000587564 SETDB2Q96T68 719 aa28.42■■■□□ 2.14
SPRED3-205ENST00000587564 C21orf2O43822 256 aa28.41■■■□□ 2.14
SPRED3-205ENST00000587564 CAMTA2O94983 1202 aa28.41■■■□□ 2.14
SPRED3-205ENST00000587564 NUDCQ9Y266 331 aa28.41■■■□□ 2.14
SPRED3-205ENST00000587564 DZIP3Q86Y13 1208 aaKnown RBP28.4■■■□□ 2.14
SPRED3-205ENST00000587564 BCORQ6W2J9 1755 aa28.39■■■□□ 2.14
SPRED3-205ENST00000587564 ST5P78524 1137 aa28.39■■■□□ 2.14
SPRED3-205ENST00000587564 CCDC88AQ3V6T2 1871 aa28.38■■■□□ 2.13
SPRED3-205ENST00000587564 RTF1Q92541 710 aaKnown RBP28.38■■■□□ 2.13
SPRED3-205ENST00000587564 U2AF1L5P0DN76 240 aaPredicted RBP28.37■■■□□ 2.13
SPRED3-205ENST00000587564 U2AF1Q01081 240 aaKnown RBP eCLIP28.37■■■□□ 2.13
SPRED3-205ENST00000587564 DPY19L2Q6NUT2 758 aa28.37■■■□□ 2.13
SPRED3-205ENST00000587564 JMYQ8N9B5 988 aa28.37■■■□□ 2.13
SPRED3-205ENST00000587564 PIP4K2AP48426 406 aaPredicted RBP28.36■■■□□ 2.13
SPRED3-205ENST00000587564 ERFEQ4G0M1 354 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms